Contig 004258:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012G18+                                                           TTGACAATAAT
                      ____________________________________________________________
consensus                                                              TTGACAATAAT
 
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rJMSF012G18+          GATGATGTGGATTCTGTGTGGGGCTTCAGTGCGAAGGACTCGAATAATGATAAACATGGG
                      ____________________________________________________________
consensus             GATGATGTGGATTCTGTGTGGGGCTTCAGTGCGAAGGACTCGAATAATGATAAACATGGG
 
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rJMSF012G18+          GAAAATTATTTCTTTGGGTCGAATGATTTTGGTGGAAGTCCGGTGAGAACAGGATCCCCA
rJMSF020P12+                     CTTTGGGTCGAATGATTTTGGTGGAAGTCCGGTGAGAACAGGATCCCCA
                      ____________________________________________________________
consensus             GAAAATTATTTCTTTGGGTCGAATGATTTTGGTGGAAGTCCGGTGAGAACAGGATCCCCA
 
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rJMSF012G18+          GCAGCAGAGAGTAGATTTCAGAAGAATAGCCCATTCTTTGAGGATTCTGTTCCTGGGTCT
rJMSF020P12+          GCAGCAGAGAGTAGATTTCAGAAGAATAGCCCATTCTTTGAGGATTCTGTTCCTGGGTCT
                      ____________________________________________________________
consensus             GCAGCAGAGAGTAGATTTCAGAAGAATAGCCCATTCTTTGAGGATTCTGTTCCTGGGTCT
 
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rJMSF012G18+          CCCCTCTCAAGAGCTGGGAATTCACCACGAAGATACAGTGTTGGATCAGGTGATCCATTT
rJMSF020P12+          CCCCTCTCAAGAGCTGGGAATTCACCACGAAGATACAGTGTTGGATCAGGTGATCCATTT
                      ____________________________________________________________
consensus             CCCCTCTCAAGAGCTGGGAATTCACCACGAAGATACAGTGTTGGATCAGGTGATCCATTT
 
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rJMSF012G18+          GAAAGTTTCTCGAGGTACGATTCCTTCAGTACTCATGACCGCACCTCTTCCCCCCAACGA
rJMSF020P12+          GAAAGTTTCTCGAGGTACGATTCCTTCAGTACTCATGACCGCACCTCTTCCCCCCAACGA
                      ____________________________________________________________
consensus             GAAAGTTTCTCGAGGTACGATTCCTTCAGTACTCATGACCGCACCTCTTCCCCCCAACGA
 
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rJMSF012G18+          GAAACTCTCACGAGGTTCGACTCCATGAGCAGCACGAGTGGCTTTGATCACAGCCGGGGG
rJMSF020P12+          GAAACTCTCACGAGGTTCGACTCCATGAGCAGCACGAGTGGCTTTGATCACAGCCGGGGG
                      ____________________________________________________________
consensus             GAAACTCTCACGAGGTTCGACTCCATGAGCAGCACGAGTGGCTTTGATCACAGCCGGGGG
 
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rJMSF012G18+          TTCTCTTTTGATGATTCTGACCCATTTGGGTCTAGCGGTCCATTTAAGGTATCTTCAGAG
rJMSF020P12+          TTCTCTTTTGATGATTCTGACCCATTTGGGTCTAGCGGTCCATTTAAGGTATCTTCAGAG
                      ____________________________________________________________
consensus             TTCTCTTTTGATGATTCTGACCCATTTGGGTCTAGCGGTCCATTTAAGGTATCTTCAGAG
 
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rJMSF012G18+          AGTCAAACCCCTAAAAAGAGTACAGATAGTTGGAATGCTTTCTAGATTGTAATTTTGGCC
rJMSF020P12+          AGTCAAACCCCTAAAAAGAGTACAGATAGTTGGAATGCTTTCTAGATTGTAATTTTGGCC
                      ____________________________________________________________
consensus             AGTCAAACCCCTAAAAAGAGTACAGATAGTTGGAATGCTTTCTAGATTGTAATTTTGGCC
 
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rJMSF012G18+          ACACGGCCAAGTTTTACCAGAGCATTGCACCATATGTTGTTGGCGATAACGAATCATATG
rJMSF020P12+          ACACGGCCAAGTTTTACCAGAGCATTGCACCATATGTTGTTGGCGATAACGAATCATATG
                      ____________________________________________________________
consensus             ACACGGCCAAGTTTTACCAGAGCATTGCACCATATGTTGTTGGCGATAACGAATCATATG
 
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rJMSF012G18+          ACAGACAGATTCTTAAAGTCTTGTATACGACATAGTCCGGGTGTTAAGGTCTGATGTCTC
rJMSF020P12+          ACAGACAGATTCTTAAAGTTTTGTATACGACATAGTCCGGGTGTTAAGGTCTGATGTCTC
                      ____________________________________________________________
consensus             ACAGACAGATTCTTAAAGTTTTGTATACGACATAGTCCGGGTGTTAAGGTCTGATGTCTC
 
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rJMSF012G18+          TGCTGCAGTGCAGCAGCATCCATTTGTTGAAGCAAGTGTTCGAGATTGAGAGTACGAGAG
rJMSF020P12+          TGCTGCAGTGCAGCAGCATCCATTTGTTGAAGCAAGTGTTCGAGATTGAGAGTACGAGAG
                      ____________________________________________________________
consensus             TGCTGCAGTGCAGCAGCATCCATTTGTTGAAGCAAGTGTTCGAGATTGAGAGTACGAGAG
 
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rJMSF012G18+          CGATATAGAAGTGGAGGGTGTTTAAATTTGGTGGCATGCACATATTTT            
rJMSF020P12+          CGATATAGAAGTGGAGGGTGTTTAAATTTGGTGGCATGCATATATTTTTGTTTTGACTCT
                      ____________________________________________________________
consensus             CGATATAGAAGTGGAGGGTGTTTAAATTTGGTGGCATGCATATATTTTTGTTTTGACTCT
 
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rJMSF020P12+          TCAGGATCATCTTGGTTTTTAATTTGCTTTTTCCTCCATTGTTATTTGTTGTGGAATACG
                      ____________________________________________________________
consensus             TCAGGATCATCTTGGTTTTTAATTTGCTTTTTCCTCCATTGTTATTTGTTGTGGAATACG