Contig 004235:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016K10Sequence405014628346004235 (2)
JMSF017K10Sequence552003634 (2)gb|AAV88066.1|1e-06NBS-LRR protein [Ipomoea batatas]122004235 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016K10+ GGGTAGACCACGCTCCAGCTTCGCGGCTCTGCTTCTCGGTCTCTCC
                      ____________________________________________________________
consensus GGGTAGACCACGCTCCAGCTTCGCGGCTCTGCTTCTCGGTCTCTCC
 
. : . : . : . : . : . :
rJMSF016K10+ TCTGCGGCTCTGCTTCGCAAATCGCAAGTCGCCACCGCCGACCACTGGCCGTTCTGGGTG
                      ____________________________________________________________
consensus TCTGCGGCTCTGCTTCGCAAATCGCAAGTCGCCACCGCCGACCACTGGCCGTTCTGGGTG
 
. : . : . : . : . : . :
rJMSF017K10+ ATGAGAAGAAGAACAACA
rJMSF016K10+ GAAGGCATTCGCACTCCGTCATCTCCGTCCGTCCGTCTGTCCATGAGAAGAAGAACAACA
                      ____________________________________________________________
consensus GAAGGCATTCGCACTCCGTCATCTCCGTCCGTCCGTCTGTCCATGAGAAGAAGAACAACA
 
. : . : . : . : . : . :
rJMSF017K10+ TAGCAGGCAGCAGCTCGGCAGNTCCGTCAGCTCCNCCGTNTCCATGAGTCCACAGTAGTC
rJMSF016K10+ TAGCAGGCAGCAGCTCGGCAGCTCCGTCAGCTCCACCGTCTCCATGAGTCCACAGTAGTC
                      ____________________________________________________________
consensus TAGCAGGCAGCAGCTCGGCAGCTCCGTCAGCTCCACCGTCTCCATGAGTCCACAGTAGTC
 
. : . : . : . : . : . :
rJMSF017K10+ TTNTTCAGCCGCGGTCCGTCCNTAATCCCTNGGAT
rJMSF016K10+ TTCTTCAGCCGCGGTCCGTCCCTAATCCCTTGGATCTGTTACATCTGTAGTCTGTAGATC
                      ____________________________________________________________
consensus TTCTTCAGCCGCGGTCCGTCCCTAATCCCTTGGATCTGTTACATCTGTAGTCTGTAGATC
 
. : . : . : . : . : . :
rJMSF016K10+ AGTTCATTAACTTCATTTTCCCTAATTACTTGCGAATTTTGCCCTAATTACTTTCGCTTT
                      ____________________________________________________________
consensus AGTTCATTAACTTCATTTTCCCTAATTACTTGCGAATTTTGCCCTAATTACTTTCGCTTT