Contig 004232:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021G22Sequence497012877 (3)ref|XP_004242591.1|5e-17PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol668004232 (3)gb|ACN26059.1|8e-79unknown [Zea mays] gb|AFW68477.1| hypothetical protein ZEAMMB73_483363 [Zea mays
JMSF011K23Sequence356012877 (3)ref|XP_004242591.1|8e-08PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol723004232 (3)emb|CAN75999.1|2e-95hypothetical protein VITISV_019163 [Vitis vinifera]
JMSF016C18Sequence471012877 (3)ref|XP_004242591.1|9e-18PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Sol778004232 (3)ref|XP_004982730.1|2e-102PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011K23+ TGATGATACTCCTGCTGT
rJMSF016C18+ TTTATAATATCGAGATTAAGGGATTGGAGAATCTGCCTCCTGATGATACTCCTGCTGT
                      ____________________________________________________________
consensus TTTATAATATCGAGATTAAGGGATTGGAGAATCTGCCTCCTGATGATACTCCTGCTGT
 
. : . : . : . : . : . :
rJMSF011K23+ GTTTGTATCCAACCACCAGAGCTTTTTAGACATTTACACTCTCCTTACTCTTGGGCGAAG
rJMFF021G22+ GGGCGAAG
rJMSF016C18+ GTTTGTATCCAACCACCAGAGCTTTTTAGACATTTACACTCTCCTTACTCTTGGGCGAAG
                      ____________________________________________________________
consensus GTTTGTATCCAACCACCAGAGCTTTTTAGACATTTACACTCTCCTTACTCTTGGGCGAAG
 
. : . : . : . : . : . :
rJMSF011K23+ CTTCAAATTCATTAGCAAGACTGCTATTTTCCTCTTTCCTATCATTGGTTGGGCCATGTA
rJMFF021G22+ CTTCAAATTCATTAGCAAGACTGCTATTTTCCTCTTTCCTATCATTGGTTGGGCCATGTA
rJMSF016C18+ CTTCAAATTCATTAGCAAGACTGCTATTTTCCTCTTTCCTATCATTGGTTGGGCCATGTA
                      ____________________________________________________________
consensus CTTCAAATTCATTAGCAAGACTGCTATTTTCCTCTTTCCTATCATTGGTTGGGCCATGTA
 
. : . : . : . : . : . :
rJMSF011K23+ TCTGATGGGAACTATTCCCTTGAGGCGTATGGACACCAGAAGCCAATTAGATTGCCTTAA
rJMFF021G22+ TCTGATGGGAACTATTCCCTTGAGGCGTATGGACACCAGAAGCCAATTAGATTGCCTTAA
rJMSF016C18+ TCTGATGGGAACTATTCCCTTGAGGCGTATGGACACCAGAAGCCAATTAGATTGCCTTAA
                      ____________________________________________________________
consensus TCTGATGGGAACTATTCCCTTGAGGCGTATGGACACCAGAAGCCAATTAGATTGCCTTAA
 
. : . : . : . : . : . :
rJMSF011K23+ GAGATGCATGGATCTTGTCACGAAGGGAGCATCTGTTTTTTTCTTCCCAGAGGGTACTCG
rJMFF021G22+ GAGATGCATGGATCTTGTCACGAAGGGAGCATCTGTTTTTTTCTTCCCAGAGGGTACTCG
rJMSF016C18+ GAGATGCATGGATCTTGTCACGAAGGGAGCATCTGTTTTTTTCTTCCCAGAGGGTACTCG
                      ____________________________________________________________
consensus GAGATGCATGGATCTTGTCACGAAGGGAGCATCTGTTTTTTTCTTCCCAGAGGGTACTCG
 
. : . : . : . : . : . :
rJMSF011K23+ GAGTAAAGATGGAAAGCTAGGGGTTTTCAAGAAAGGTGCATTCAGTATTGCTGCAAAAAC
rJMFF021G22+ GAGTAAAGATGGAAAGCTAGGGGTTTTCAAGAAAGGTGCATTCAGTATTGCTGCAAAAAC
rJMSF016C18+ GAGTAAAGATGGAAAGCTAGGGGTTTTCAAGAAAGGTGCATTCAGTATTGCTGCAAAAAC
                      ____________________________________________________________
consensus GAGTAAAGATGGAAAGCTAGGGGTTTTCAAGAAAGGTGCATTCAGTATTGCTGCAAAAAC
 
. : . : . : . : . : . :
rJMSF011K23+ TGGAGTTCCTGTTATTCCTATAACCCTTGTTGGAACTGGAAAAATCATGCCTGCAGGAAT
rJMFF021G22+ TGGAGTTCCTGTTATTCCTATAACCCTTGTTGGAACTGGAAAAATCATGCCTGCAGGAAT
rJMSF016C18+ TGGAGTTCCTGTTATTCCTATAACCCTTGTTGGAACTGGAAAAATCATGCCTGCAGGAAT
                      ____________________________________________________________
consensus TGGAGTTCCTGTTATTCCTATAACCCTTGTTGGAACTGGAAAAATCATGCCTGCAGGAAT
 
. : . : . : . : . : . :
rJMSF011K23+ GGAGGGCAGATTAAATTGTGGGTCAGTTAAAGTTGTGATTCATCAGCCTATTGAGGGAAA
rJMFF021G22+ GGAGGGCAGATTAAATTGTGGGTCAGTTAAAGTTGTGATTCATCAGCCTATTGAGGGAAA
rJMSF016C18+ GGAGGGCAGATTAAATTGTGGGTCAGTTAAAGTTGTGATTCATCAGCCTATTGAGGGAAA
                      ____________________________________________________________
consensus GGAGGGCAGATTAAATTGTGGGTCAGTTAAAGTTGTGATTCATCAGCCTATTGAGGGAAA
 
. : . : . : . : . : . :
rJMSF011K23+ TAATCCAGAAGCATTATGTAGTGAGGCAAGGAATGTGATATCAAATCAGCTTAATCTCCA
rJMFF021G22+ TAATCCAGAAGCATTATGTAGTGAGGCAAGGAATGTGATATCAAATCAGCTTAATCTCCA
rJMSF016C18+ TAATCCAGAAGCATTATGTAGTGAGGCAAGGAATGTGATATCAAATCAGCTTAATCTCCA
                      ____________________________________________________________
consensus TAATCCAGAAGCATTATGTAGTGAGGCAAGGAATGTGATATCAAATCAGCTTAATCTCCA
 
. : . : . : . : . : . :
rJMSF011K23+ AGGATGAGAGATAAGAGCAGTATTCTAGTTCCACTTTAGGATCAAAAGGTTTAAAGGATT
rJMFF021G22+ AGGATGAGAGATAAGAGCAGTATTCTAGTTCCACTTTAGGATCAAAAGGTTTAAAGGATT
rJMSF016C18+ AGGATGAGAGATAAGAGCAGTATTCTAGTTCCACTTTAGGATCAAAAGGTTTAAAGGATT
                      ____________________________________________________________
consensus AGGATGAGAGATAAGAGCAGTATTCTAGTTCCACTTTAGGATCAAAAGGTTTAAAGGATT
 
. : . : . : . : . : . :
rJMSF011K23+ TTCTGGCTTAAAAGTTACTCTCCAAGGTTTGTCAATCCTTAGGGTGTTTGGTTGGATGGA
rJMFF021G22+ TTCTGGCTTAAAAGTTACTCTCCAAGGTTTGTCAATCCTTAGGGTGTTTGGTTGGATGGA
rJMSF016C18+ TTCTGGCTTAAAAGTTACTCTCCAAGGTTTGTCAATCCTTAGGGTGTTTGGTTGGATGGA
                      ____________________________________________________________
consensus TTCTGGCTTAAAAGTTACTCTCCAAGGTTTGTCAATCCTTAGGGTGTTTGGTTGGATGGA
 
. : . : . : . : . : . :
rJMSF011K23+ GGGAATTAGGAAGGAATTGTAATTTGGTGAGAATAAAGTAGGAATTCAAATTACATTGTT
rJMFF021G22+ GGGAATTAGGAAGGAATTGTAATTTGGTGAGAATAAAGTAGGAATTCAAATTACATTGTT
rJMSF016C18+ GGGAATTAGGAAGGAATTGTAATTTGGTGAGAATAAAGTAGGAATTCAAATTACATTGTT
                      ____________________________________________________________
consensus GGGAATTAGGAAGGAATTGTAATTTGGTGAGAATAAAGTAGGAATTCAAATTACATTGTT
 
. : . : . : . : . : . :
rJMSF011K23+ TGGTAGGGAGGAATAAAATTATTTGGAATGAGAATGGAAGAAGTG
rJMFF021G22+ TGGTAGGGAGGAATAAAATTATTTGGAATGAGAATGGAAGAAGTGATATAAAGACTCAAA
rJMSF016C18+ TGGTAGGGAGGAATAAAATTATTTGGAATGAGAATGGAAGAAGTGATATAAAGACTCAAA
                      ____________________________________________________________
consensus TGGTAGGGAGGAATAAAATTATTTGGAATGAGAATGGAAGAAGTGATATAAAGACTCAAA