Contig 004230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN002B11Sequence576004230 (8)ref|XP_009620446.1|5e-35PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMFN007M08Sequence586004230 (8)ref|XP_009620446.1|6e-35PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMFN009E05Sequence627004230 (8)dbj|BAA06151.1|1e-34pit2 [Nicotiana tabacum] prf||2106387C Al-induced protein
JMFN018B24Sequence529004230 (8)ref|XP_009620446.1|2e-13PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMFN019M08Sequence545004230 (8)dbj|BAA06151.1|5e-35pit2 [Nicotiana tabacum] prf||2106387C Al-induced protein
JMFN045A21Sequence575004230 (8)ref|XP_009620446.1|5e-35PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMSF015L19Sequence471004230 (8)dbj|BAA06151.1|2e-35pit2 [Nicotiana tabacum] prf||2106387C Al-induced protein586004230 (8)dbj|BAA06151.1|5e-35pit2 [Nicotiana tabacum] prf||2106387C Al-induced protein

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN007M08+ TTTTTTTGGGAAGATAAAATAACATTGATA
                      ____________________________________________________________
consensus TTTTTTTGGGAAGATAAAATAACATTGATA
 
. : . : . : . : . : . :
JMFN007M08+ AAACTCTATATATAAAATTCATTAACACTCTCCTAATGGATAGTCCCATCCATTCCCTTC
JMFN045A21+ AAACTCTATATATAAAATTCATTAACACTCTCCTAATGGATAGTCCCATCCATTCCCTTC
JMFN002B11+ AAACTCTATATATAAAATTCATTAACACTCTCCTAATGGATAGTCCCATCCATTCCCTTC
JMFN019M08+ GTCCCATCCATTCCCTTC
JMFN018B24+ ATAGTCCCATCCATTCCCTTC
JMFN009E05+ TAAAATTCATTAACACTCTCCTAATGGATAGTCCCATCCATTCCCTTC
                      ____________________________________________________________
consensus AAACTCTATATATAAAATTCATTAACACTCTCCTAATGGATAGTCCCATCCATTCCCTTC
 
. : . : . : . : . : . :
JMFN007M08+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
JMFN045A21+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
JMFN002B11+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
JMFN019M08+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
JMFN018B24+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
JMFN009E05+ TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
rJMSF015L19- GTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
                      ____________________________________________________________
consensus TTATTTTATACTCCGTACATGCGTAAGACAATTGATGTTCTAGTCATTACATAGTACAAA
 
. : . : . : . : . : . :
JMFN007M08+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
JMFN045A21+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
JMFN002B11+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
JMFN019M08+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
JMFN018B24+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGGCAGG
JMFN009E05+ CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
rJMSF015L19- CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
                      ____________________________________________________________
consensus CGAAAAGCGATGACATTATCTTATAACATTTCATACATTGAAGAGAAACGATGGGCCAGG
 
. : . : . : . : . : . :
JMFN007M08+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
JMFN045A21+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
JMFN002B11+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
JMFN019M08+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
JMFN018B24+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTGCGATATATGGGTTGTGATTCTTGT
JMFN009E05+ AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
JMSF015L19+ CTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
rJMSF015L19- AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
                      ____________________________________________________________
consensus AGTCTATACAAACATAAGCAGCAGATATCCTTAGTACGATATATGGGTTGTGATTCTTGT
 
. : . : . : . : . : . :
JMFN007M08+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
JMFN045A21+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
JMFN002B11+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
JMFN019M08+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
JMFN018B24+ CTCATGCAAGTTCAGTGTGTGCATGAATGTATATGCACTGTTTGAGTTCGGACAACTTTC
JMFN009E05+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
JMSF015L19+ CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
rJMSF015L19- CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
                      ____________________________________________________________
consensus CTCATGCAAGTCCAGTGTGTG-ATGAATGTAACTGCACTGTTTGACTTCGGACAACTTGC
 
. : . : . : . : . : . :
JMFN007M08+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
JMFN045A21+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
JMFN002B11+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
JMFN019M08+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
JMFN018B24+ AGCACGCCAGGCTTTTTGGAAAGCTCATGGACTTTGCGCAGTGAGTCACACTTGGCAGAC
JMFN009E05+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
JMSF015L19+ AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
rJMSF015L19- AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
                      ____________________________________________________________
consensus AGCACACCAGGCTTTTTGGAAAGCTCATCGAC-CTGCGCAG-GAGTCA-ACTTGGCAGA-
 
. : . : . : . : . : . :
JMFN007M08+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
JMFN045A21+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
JMFN002B11+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
JMFN019M08+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
JMFN018B24+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTGGCGGCATCCTCACT
JMFN009E05+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
JMSF015L19+ GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
rJMSF015L19- GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
                      ____________________________________________________________
consensus GAATCCACTCGCAGCGTGCTTGTAGGTGTACAGTATCGCCTCCTTCGCGGCATCCTCACT
 
. : . : . : . : . : . :
JMFN007M08+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
JMFN045A21+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
JMFN002B11+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
JMFN019M08+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
JMFN018B24+ GCCAACGACAGAAGCTAGGGTTTTTAGATGAAAATCCTGGTGTTTTACGCCCTCGTCGGG
JMFN009E05+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
JMSF015L19+ GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
rJMSF015L19- GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
                      ____________________________________________________________
consensus GCCAACGACAGAAGCGAGGGTTTTGAGATGAAAATCCTCGTGTTCTACGCCCTCGTCGGG
 
. : . : . : . : . : . :
JMFN007M08+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMFN045A21+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMFN002B11+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMFN019M08+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMFN018B24+ TTTGTGGGTGTAAAGCGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMFN009E05+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
JMSF015L19+ TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
rJMSF015L19- TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
                      ____________________________________________________________
consensus TTTGTGGGTGTAAA-CGATGTAGACCTTCGCGTCGGACGTTGATTGGGGTTGGGAATCGG
 
. : . : . : . : . : . :
JMFN007M08+ CCATCGCAGCGACGAACAAGAA
JMFN045A21+ CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAA
JMFN002B11+ CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAG
JMFN019M08+ CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAGGTACAAGGGTG
JMFN018B24+ CCATGGCACCTACGAACAACAAGG
JMFN009E05+ CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAGGTACAAGGGTGAGAAGAT
JMSF015L19+ CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAGGTACAAGGGTGAGAAGAT
rJMSF015L19- CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAGGTACAAGGGTGAGAAGAT
                      ____________________________________________________________
consensus CCATCGCAGCGACGAACAAGAAGGACAGTAGCAGAATCGAAGGTACAAGGGTGAGAAGAT
 
. : . : . : . : . : . :
JMFN009E05+ TTTGGGTTTTCGGCATTTCGCTATGATCGTATTTATAGAATTTA
JMSF015L19+ TTTGGGTTTTCGGCATTTCGCTATGATCGTATTTATAGAATTTAGAACCGAAGATATTTC
rJMSF015L19- TTTGGGTTTTCGGCATTTCGCTATGATCGTATTTATAGAATTTAGAACCGAAGATATTTC
                      ____________________________________________________________
consensus TTTGGGTTTTCGGCATTTCGCTATGATCGTATTTATAGAATTTAGAACCGAAGATATTTC