Contig 004229:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015K08Sequence426007827 (3)ref|XP_004238236.1|5e-08PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers751004229 (3)gb|AFK47412.1|1e-52unknown [Lotus japonicus]
JMSF015K18Sequence552007827 (3)ref|XP_004238236.1|2e-50PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers780004229 (3)ref|XP_011083720.1|4e-97PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]
JMSF038B03Sequence713007827 (3)ref|XP_004238236.1|8e-86PREDICTED: SPX and EXS domain-containing protein 5 isoform X1 [Solanum lycopers909004229 (3)ref|XP_011083720.1|3e-129PREDICTED: SPX and EXS domain-containing protein 1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038B03+ GAATGGTTCAT
                      ____________________________________________________________
consensus GAATGGTTCAT
 
. : . : . : . : . : . :
rJMSF038B03+ CGCCAGGTAGCCACCATCGCGTGGTTNGAAGCTGATTCCGTTTGTGGAAGTCACTCTGTT
                      ____________________________________________________________
consensus CGCCAGGTAGCCACCATCGCGTGGTTNGAAGCTGATTCCGTTTGTGGAAGTCACTCTGTT
 
. : . : . : . : . : . :
rJMSF038B03+ GCAATTCCTATAGTTCTTGTGTTGCCATATTTTTTTCGTCTCTTTCAATGTCTTCGGCAA
rJMSF015K08+ A
rJMSF015K18+ A
                      ____________________________________________________________
consensus GCAATTCCTATAGTTCTTGTGTTGCCATATTTTTTTCGTCTCTTTCAATGTCTTCGGCAA
 
. : . : . : . : . : . :
rJMSF038B03+ TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
rJMSF015K08+ TACACGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAANGTATTCGACTGCAGTA
rJMSF015K18+ TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
                      ____________________________________________________________
consensus TACAAGGATACTAGAGAGAAAAACGCCCTATTCAATGCTTTAAAGTATTCGACTGCAGTA
 
. : . : . : . : . : . :
rJMSF038B03+ CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
rJMSF015K08+ CCGGTGATATTTCTATCAGCCNNTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
rJMSF015K18+ CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
                      ____________________________________________________________
consensus CCGGTGATATTTCTATCAGCCCTTAAGTATCATGTCTTCCCCGAAAACTGGGTTAACATC
 
. : . : . : . : . : . :
rJMSF038B03+ TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
rJMSF015K08+ TATCGACCTTTGTGGCTACTCTCCAGTGTTNTGAACTCTCTGTACTCGTTNTACTGGGAT
rJMSF015K18+ TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
                      ____________________________________________________________
consensus TATCGACCTTTGTGGCTACTCTCCAGTGTTTTGAACTCTCTGTACTCGTTCTACTGGGAT
 
. : . : . : . : . : . :
rJMSF038B03+ CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
rJMSF015K08+ CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGANTCTTCAAGTTCAACANGCCTAAT
rJMSF015K18+ CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
                      ____________________________________________________________
consensus CTGAACAGAGATTGGGACCTGAGTTGCTTCACTCGAATCTTCAAGTTCAACAAGCCTAAT
 
. : . : . : . : . : . :
rJMSF038B03+ TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
rJMSF015K08+ TTCTTNTCAAATGTGTCATATGGACGACAATGGGTTTATTTNTGGGTAATCGGGAGCAAC
rJMSF015K18+ TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
                      ____________________________________________________________
consensus TTCTTATCAAATGTGTTATATGGACGACAATGGGTTTATTTCTGGGTAATCGGGAGCAAC
 
. : . : . : . : . : . :
rJMSF038B03+ CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
rJMSF015K08+ CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCATAGTGCGTCACAATTACCT
rJMSF015K18+ CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
                      ____________________________________________________________
consensus CTGATACTACGATGCACGTGGACATACAAGTTGTCTGCCCAT-CTGCGTCACAATTACCT
 
. : . : . : . : . : . :
rJMSF038B03+ AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
rJMSF015K08+ AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
rJMSF015K18+ AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
                      ____________________________________________________________
consensus AACCTTGTTCACAATTACCGCCTTGGAGATTTTCCGACGCTTCCAGTGGGCATTCTTTCG
 
. : . : . : . : . : . :
rJMSF038B03+ TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
rJMSF015K08+ TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGANTGA
rJMSF015K18+ TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
                      ____________________________________________________________
consensus TGTAGAAAACGAGTGGAACAAAATGACCAACAAATCGAACGTTCCGCTCTCCATGACTGA
 
. : . : . : . : . : . :
rJMSF038B03+ TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
rJMSF015K08+ TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
rJMSF015K18+ TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
                      ____________________________________________________________
consensus TATGTCGAGTGACGAGGAGAAATTACTCAACTCCAAATCATAATGTATAGGATGCCCGGC
 
. : . : . : . : . : . :
rJMSF038B03+ AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
rJMSF015K08+ AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
rJMSF015K18+ AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
                      ____________________________________________________________
consensus AGTATCATCGGAATCTTCTTTATACTGAACAGAGGAGAGATTGGATATAACAATGCCAGA
 
. : . : . : . : . : . :
rJMSF038B03+ GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
rJMSF015K08+ GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
rJMSF015K18+ GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
                      ____________________________________________________________
consensus GATTCCATTCTTTTTGCTCATTTGCATATAAGAATTCTTTCAATAGTATAGGATACCTAT
 
. : . : . : . : . : . :
rJMSF038B03+ ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
rJMSF015K08+ ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACNCGGC
rJMSF015K18+ ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
                      ____________________________________________________________
consensus ATATAATAGATGATGAACTATGAAGTATGAAATATGAACTTCCTTCAAAGAAGACACGGC
 
. : . : . : . : . : . :
rJMSF038B03+ CAATCTCTCGAGTTCTTCCATAGGAACTTTTTTGGAAGCTATTATACAATCATTGAGAT
rJMSF015K08+ CAATCTCTCGAGTTCTTCCATAGGAAC-TTT
rJMSF015K18+ CAATCTCTCGAGTTCTTCCATAGGAAC-TTTTTGGAAGCTATTATACAATCATTGAGATC
                      ____________________________________________________________
consensus CAATCTCTCGAGTTCTTCCATAGGAAC-TTTTTGGAAGCTATTATACAATCATTGAGATC