Contig 004213:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024H07-                                                                    GGG
                      ____________________________________________________________
consensus                                                                      GGG
 
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JMSF024H07-           CAGTCTATGGTGATAGGTTGCACAGCCGGGGGTCAACTCGTGCAGCTCCTGCCTGGCTTG
                      ____________________________________________________________
consensus             CAGTCTATGGTGATAGGTTGCACAGCCGGGGGTCAACTCGTGCAGCTCCTGCCTGGCTTG
 
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JMSF024H07-           AAACTGGAGAGGCAGTTGGTAATATTTTTCATGAAATTTTAGTTGTGGACAATATTTTAG
                      ____________________________________________________________
consensus             AAACTGGAGAGGCAGTTGGTAATATTTTTCATGAAATTTTAGTTGTGGACAATATTTTAG
 
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JMSF024H07-           AATGTATCTTCTTTAACGTTCTTTATATTGCAGCAAATATGTATTCTGAAATGCGGGAAG
                      ____________________________________________________________
consensus             AATGTATCTTCTTTAACGTTCTTTATATTGCAGCAAATATGTATTCTGAAATGCGGGAAG
 
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JMSF024H07-           AAGCTCGTGACCATGCACGTCTGCGCAATGCATACTTTGAACAGGTGCTTTTTTAAAATA
                      ____________________________________________________________
consensus             AAGCTCGTGACCATGCACGTCTGCGCAATGCATACTTTGAACAGGTGCTTTTTTAAAATA
 
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JMSF024H07-           ATAATAAAAATAAAATAAATGGTGTGGTGACAAAAGGCTGATTATCTTTGGTTCAAATGG
                      ____________________________________________________________
consensus             ATAATAAAAATAAAATAAATGGTGTGGTGACAAAAGGCTGATTATCTTTGGTTCAAATGG
 
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JMSF024H07-           CAAATGTGAGGTTTGGTTTTTGGGGGGTGGTTTCCATGGGGAGAAATCTTGTGTGGGGTG
                      ____________________________________________________________
consensus             CAAATGTGAGGTTTGGTTTTTGGGGGGTGGTTTCCATGGGGAGAAATCTTGTGTGGGGTG
 
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JMSF024H07-           TTTTAGTCCCTGCATATAGAGGCTACTCTATCCCAGTATATTTATGGGTATCGTAATTGT
                      ____________________________________________________________
consensus             TTTTAGTCCCTGCATATAGAGGCTACTCTATCCCAGTATATTTATGGGTATCGTAATTGT
 
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JMSF024H07-           TAATTGTAGTTTGTTTATTTGTTGACAGGAACATGTGGTAAAAGCTATTTATGGCTAACA
                      ____________________________________________________________
consensus             TAATTGTAGTTTGTTTATTTGTTGACAGGAACATGTGGTAAAAGCTATTTATGGCTAACA
 
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JMSF024H07-           TGTTTCTTTTATTTCACTGCTTAAAGATGAGATGCATATTCTTCTATGTGCCAAATCTGG
                      ____________________________________________________________
consensus             TGTTTCTTTTATTTCACTGCTTAAAGATGAGATGCATATTCTTCTATGTGCCAAATCTGG
 
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JMSF024H07-           ATATAGCTTCACCAGATACTGTTACTTTTGGGTTTTTTTATATGGTGTATTTACACTTTA
rJMSF024H07+                                                                   TTA
                      ____________________________________________________________
consensus             ATATAGCTTCACCAGATACTGTTACTTTTGGGTTTTTTTATATGGTGTATTTACACTTTA
 
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JMSF024H07-           ACCACTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGG         
rJMSF024H07+          ACCNCTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
rJMSF029F11+                                   CAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
rJMSF011N23+                                   CAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
                      ____________________________________________________________
consensus             ACCACTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
 
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rJMSF024H07+          TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCACAATA--AAAATGAAGGATGCTCA
rJMSF029F11+          TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCNCAATATGAAAATGAAGGATGCTCC
rJMSF011N23+          TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGNTGCNCNATATGCAAATGAAGGATGCTCA
                      ____________________________________________________________
consensus             TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCACAATATGAAAATGAAGGATGCTCA
 
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rJMSF024H07+          CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
rJMSF029F11+          CGGCAGAGCTCAGGAATNTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCNATGGCNG
rJMSF011N23+          CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
                      ____________________________________________________________
consensus             CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
 
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rJMSF024H07+          AGGACAGGAAAGAATTATTGACCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
rJMSF029F11+          NGGACNGGAAAGAATTATTGACCTGCNTGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
rJMSF011N23+          AGGNCAGGAAAGAATTATTGNCCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
                      ____________________________________________________________
consensus             AGGACAGGAAAGAATTATTGACCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
 
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rJMSF024H07+          TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
rJMSF029F11+          TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
rJMSF011N23+          TAAGCGCGAGCTAGCTGTTCTGAGAAACGCAGCAAGATCAGCAGATCANCGGCTGCAGGT
                      ____________________________________________________________
consensus             TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
 
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rJMSF024H07+          ATTCATTTGTGTCGGGACNGGGCATCACNCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
rJMSF029F11+          ATTCATTTGTGTCGGGACNGGGCNTCNCCCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
rJMSF011N23+          ATTCATTTGTGTCGGGACAGGGCATCACNCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
                      ____________________________________________________________
consensus             ATTCATTTGTGTCGGGACAGGGCATCACCCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
 
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rJMSF024H07+          AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCNCAACC
rJMSF029F11+          AACTGCCATCCAACGCTACCTCCTCGAGGNGGAAGGCCTTGACTACTNCGAACCNCAACC
rJMSF011N23+          AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCACAACC
                      ____________________________________________________________
consensus             AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCACAACC
 
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rJMSF024H07+          AGGGCTTNTCCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACNCNGTA
rJMSF029F11+          NGGGNTTTTNCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
rJMSF011N23+          AGGGCTTCTNCGAGTTGTGGTATTCTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
                      ____________________________________________________________
consensus             AGGGCTTTTCCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
 
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rJMSF024H07+          CNCCCTTGAAATGTGTTATATTTGTGGTATCTGTATATGGAAAAGTGTAGTGCAACTTCN
rJMSF029F11+          CNCCCNTGAAATGTGTTATATTTGTGGTATCNGTATATGGAAAAGTGTAGNGCAACTTCN
rJMSF011N23+          CNCCCTTGAAATGTGTTATATTNGTGGTATNTGTATATGGAAAAGTGTAGTGCAACTTCA
                      ____________________________________________________________
consensus             CNCCCTTGAAATGTGTTATATTTGTGGTATCTGTATATGGAAAAGTGTAGTGCAACTTCA
 
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rJMSF024H07+          CGGAGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
rJMSF029F11+          CGGAGTAGGGNGGAAAAGAAAAAGAAAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
rJMSF011N23+          CGGNGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
                      ____________________________________________________________
consensus             CGGAGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
 
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rJMSF024H07+          ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
rJMSF029F11+          ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
rJMSF011N23+          ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
                      ____________________________________________________________
consensus             ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
 
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rJMSF024H07+          TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCA                         
rJMSF029F11+          TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATT    
rJMSF011N23+          TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATTATTG
                      ____________________________________________________________
consensus             TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATTATTG