Contig 004213: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMSF024H07- GGG
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consensus GGG
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JMSF024H07- CAGTCTATGGTGATAGGTTGCACAGCCGGGGGTCAACTCGTGCAGCTCCTGCCTGGCTTG
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consensus CAGTCTATGGTGATAGGTTGCACAGCCGGGGGTCAACTCGTGCAGCTCCTGCCTGGCTTG
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JMSF024H07- AAACTGGAGAGGCAGTTGGTAATATTTTTCATGAAATTTTAGTTGTGGACAATATTTTAG
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consensus AAACTGGAGAGGCAGTTGGTAATATTTTTCATGAAATTTTAGTTGTGGACAATATTTTAG
. : . : . : . : . : . :
JMSF024H07- AATGTATCTTCTTTAACGTTCTTTATATTGCAGCAAATATGTATTCTGAAATGCGGGAAG
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consensus AATGTATCTTCTTTAACGTTCTTTATATTGCAGCAAATATGTATTCTGAAATGCGGGAAG
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JMSF024H07- AAGCTCGTGACCATGCACGTCTGCGCAATGCATACTTTGAACAGGTGCTTTTTTAAAATA
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consensus AAGCTCGTGACCATGCACGTCTGCGCAATGCATACTTTGAACAGGTGCTTTTTTAAAATA
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JMSF024H07- ATAATAAAAATAAAATAAATGGTGTGGTGACAAAAGGCTGATTATCTTTGGTTCAAATGG
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consensus ATAATAAAAATAAAATAAATGGTGTGGTGACAAAAGGCTGATTATCTTTGGTTCAAATGG
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JMSF024H07- CAAATGTGAGGTTTGGTTTTTGGGGGGTGGTTTCCATGGGGAGAAATCTTGTGTGGGGTG
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consensus CAAATGTGAGGTTTGGTTTTTGGGGGGTGGTTTCCATGGGGAGAAATCTTGTGTGGGGTG
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JMSF024H07- TTTTAGTCCCTGCATATAGAGGCTACTCTATCCCAGTATATTTATGGGTATCGTAATTGT
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consensus TTTTAGTCCCTGCATATAGAGGCTACTCTATCCCAGTATATTTATGGGTATCGTAATTGT
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JMSF024H07- TAATTGTAGTTTGTTTATTTGTTGACAGGAACATGTGGTAAAAGCTATTTATGGCTAACA
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consensus TAATTGTAGTTTGTTTATTTGTTGACAGGAACATGTGGTAAAAGCTATTTATGGCTAACA
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JMSF024H07- TGTTTCTTTTATTTCACTGCTTAAAGATGAGATGCATATTCTTCTATGTGCCAAATCTGG
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consensus TGTTTCTTTTATTTCACTGCTTAAAGATGAGATGCATATTCTTCTATGTGCCAAATCTGG
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JMSF024H07- ATATAGCTTCACCAGATACTGTTACTTTTGGGTTTTTTTATATGGTGTATTTACACTTTA
rJMSF024H07+ TTA
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consensus ATATAGCTTCACCAGATACTGTTACTTTTGGGTTTTTTTATATGGTGTATTTACACTTTA
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JMSF024H07- ACCACTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGG
rJMSF024H07+ ACCNCTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
rJMSF029F11+ CAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
rJMSF011N23+ CAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
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consensus ACCACTGGGATTTTATATGCAAGAGCAGGCTCGTCAGGCATACCTTAGTGGTCAGAAGGC
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rJMSF024H07+ TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCACAATA--AAAATGAAGGATGCTCA
rJMSF029F11+ TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCNCAATATGAAAATGAAGGATGCTCC
rJMSF011N23+ TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGNTGCNCNATATGCAAATGAAGGATGCTCA
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consensus TTTAGCTAAAGAATTGAGTGAAAAAGGGCAGCTGCACAATATGAAAATGAAGGATGCTCA
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rJMSF024H07+ CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
rJMSF029F11+ CGGCAGAGCTCAGGAATNTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCNATGGCNG
rJMSF011N23+ CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
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consensus CGGCAGAGCTCAGGAATCTATATTCCGCGTAAGGAATCAAGAGGTGTCAACCAATGGCAG
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rJMSF024H07+ AGGACAGGAAAGAATTATTGACCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
rJMSF029F11+ NGGACNGGAAAGAATTATTGACCTGCNTGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
rJMSF011N23+ AGGNCAGGAAAGAATTATTGNCCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
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consensus AGGACAGGAAAGAATTATTGACCTGCATGGACTTCATGTTTCAGAAGGTATTCAAGTCCT
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rJMSF024H07+ TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
rJMSF029F11+ TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
rJMSF011N23+ TAAGCGCGAGCTAGCTGTTCTGAGAAACGCAGCAAGATCAGCAGATCANCGGCTGCAGGT
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consensus TAAGCGCGAGCTAGCTGTTTTGAGAAACGCAGCAAGATCAGCAGATCAGCGGCTGCAGGT
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rJMSF024H07+ ATTCATTTGTGTCGGGACNGGGCATCACNCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
rJMSF029F11+ ATTCATTTGTGTCGGGACNGGGCNTCNCCCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
rJMSF011N23+ ATTCATTTGTGTCGGGACAGGGCATCACNCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
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consensus ATTCATTTGTGTCGGGACAGGGCATCACCCCAAGGGTTCAAGGACTCCAGCTAGACTTCC
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rJMSF024H07+ AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCNCAACC
rJMSF029F11+ AACTGCCATCCAACGCTACCTCCTCGAGGNGGAAGGCCTTGACTACTNCGAACCNCAACC
rJMSF011N23+ AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCACAACC
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consensus AACTGCCATCCAACGCTACCTCCTCGAGGAGGAAGGCCTTGACTACTCCGAACCACAACC
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rJMSF024H07+ AGGGCTTNTCCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACNCNGTA
rJMSF029F11+ NGGGNTTTTNCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
rJMSF011N23+ AGGGCTTCTNCGAGTTGTGGTATTCTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
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consensus AGGGCTTTTCCGAGTTGTGGTATACTAAGTCAAGAAGGTATAGAAGTTTTTAACCCNGTA
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rJMSF024H07+ CNCCCTTGAAATGTGTTATATTTGTGGTATCTGTATATGGAAAAGTGTAGTGCAACTTCN
rJMSF029F11+ CNCCCNTGAAATGTGTTATATTTGTGGTATCNGTATATGGAAAAGTGTAGNGCAACTTCN
rJMSF011N23+ CNCCCTTGAAATGTGTTATATTNGTGGTATNTGTATATGGAAAAGTGTAGTGCAACTTCA
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consensus CNCCCTTGAAATGTGTTATATTTGTGGTATCTGTATATGGAAAAGTGTAGTGCAACTTCA
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rJMSF024H07+ CGGAGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
rJMSF029F11+ CGGAGTAGGGNGGAAAAGAAAAAGAAAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
rJMSF011N23+ CGGNGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
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consensus CGGAGTAGGGAGGAAAAGAAAAAG-AAAAAAAAAATCTGCGACAAGGGGCAGAGATTTGT
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rJMSF024H07+ ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
rJMSF029F11+ ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
rJMSF011N23+ ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
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consensus ATCAGTAAGGTTTAGTTGTTTGATAGTGGGATATGGGAGGAGGGTGTATCAGTCCCATGC
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rJMSF024H07+ TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCA
rJMSF029F11+ TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATT
rJMSF011N23+ TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATTATTG
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consensus TAGTTTTGTTACGTTAATTTTGTCTAAATTGCCCAATGTAACTGATAAAATTCATTATTG