Contig 004201:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005M01Sequence413004201 (6)ref|XP_006340946.1|5e-55PREDICTED: peroxidase 64-like [Solanum tuberosum]
JMSF005M03Sequence339002477 (26)406004201 (6)ref|XP_004232515.1|1e-33PREDICTED: peroxidase 64-like [Solanum lycopersicum]
JMSF009F03Sequence389004201 (6)ref|XP_006340946.1|9e-49PREDICTED: peroxidase 64-like [Solanum tuberosum]761004201 (6)ref|XP_006340946.1|1e-110PREDICTED: peroxidase 64-like [Solanum tuberosum]
JMSF030E14Sequence647004201 (6)ref|XP_006340946.1|2e-108PREDICTED: peroxidase 64-like [Solanum tuberosum]761004201 (6)ref|XP_006340946.1|1e-112PREDICTED: peroxidase 64-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF005M01- AAGCAGTGCATAATAACAATCATAGTT
JMSF009F03- AAGCAGTGCATAATAACAATCATAGTT
JMSF030E14- GGCAAGCAGTGCATAATAACAATCATAGTT
                      ____________________________________________________________
consensus GGCAAGCAGTGCATAATAACAATCATAGTT
 
. : . : . : . : . : . :
JMSF005M01- TCTTAAAGTAACAAGAGTTTCCAGCCATGGCCTCCATTGTTGCCTTGTTGAGCTCATTGA
JMSF009F03- TCTTAAAGTAACAAGAGTTTCCAGCCATGGCCTCCATTGTTGCCTTGTTGAGCTCATTGA
JMSF030E14- TCTTAAAGTAACAAGAGTTTCCAGCCATGGCCTCCATTGTTGCCTTGTTGAGCTCATTGA
                      ____________________________________________________________
consensus TCTTAAAGTAACAAGAGTTTCCAGCCATGGCCTCCATTGTTGCCTTGTTGAGCTCATTGA
 
. : . : . : . : . : . :
JMSF005M01- TGCTTGTCTTCTCCATCATTTCTCTGGGCAATGCACTGAGCTCAAACTACTATGAGAAGA
JMSF009F03- TGCTTGTCTTCTCCATCATTTCTCTGGGCAATGCACTGAGCTCAAACTACTATGAGAAGA
JMSF030E14- TGCTTGTCTTCTCCATCATTTCTCTGGGCAATGCACTGAGCTCAAACTACTATGAGAAGA
                      ____________________________________________________________
consensus TGCTTGTCTTCTCCATCATTTCTCTGGGCAATGCACTGAGCTCAAACTACTATGAGAAGA
 
. : . : . : . : . : . :
JMSF005M01- CATGTCCCCAGGCAGAGAATGCAGTGACACAGGTTGTGAAGAAGGCCTCCATGGCAGACA
JMSF009F03- CATGTCCCCAGGCAGAGAATGCAGTGACACAGGTTGTGAAGAAGGCCTCCATGGCAGACA
JMSF030E14- CATGTCCCCAGGCAGAGAATGCAGTGACACAGGTTGTGAAGAAGGCCTCCATGGCAGACA
                      ____________________________________________________________
consensus CATGTCCCCAGGCAGAGAATGCAGTGACACAGGTTGTGAAGAAGGCCTCCATGGCAGACA
 
. : . : . : . : . : . :
JMSF005M01- AAACTGTTCTTGCTGCTCTGCTGAGGATGCATTTCCATGACTGTTTTATAAGGGGCTGTG
JMSF009F03- AAACTGTTCTTGCTGCTCTGCTGAGGATGCATTTCCATGACTGTTTTATAAGGGGCTGTG
JMSF030E14- AAACTGTTCTTGCTGCTCTGCTGAGGATGCATTTCCATGACTGTTTTATAAGGGGCTGTG
                      ____________________________________________________________
consensus AAACTGTTCTTGCTGCTCTGCTGAGGATGCATTTCCATGACTGTTTTATAAGGGGCTGTG
 
. : . : . : . : . : . :
JMSF005M01- ATGCATCAGTGTTGCTGAACTCAAAGAAGAGTGCTGCAGAGAAGAATGGACCACCTAATC
JMSF009F03- ATGCATCAGTGTTGCTGAACTCAAAGAAGAGTGCTGCAGAGAAGAATGGACCACCTAATC
JMSF030E14- ATGCATCAGTGTTGCTGAACTCAAAGAAGAGTGCTGCAGAGAAGAATGGACCACCTAATC
                      ____________________________________________________________
consensus ATGCATCAGTGTTGCTGAACTCAAAGAAGAGTGCTGCAGAGAAGAATGGACCACCTAATC
 
. : . : . : . : . : . :
JMSF005M01- TGTCCCTGCACGCATTCTATGTCATTGATGATGCAAAGAAAGCAGTGGAAGCAATCTGCC
JMSF009F03- TGTCCCTGCACGCATTCTATGTCATTGATGATGCAAAGAAAGCAGTGGAAGCAATCTGCC
JMSF030E14- TGTCCCTGCACGCATTCTATGTCATTGATGATGCAAAGAAAGCAGTGGAAGCAATCTGCC
                      ____________________________________________________________
consensus TGTCCCTGCACGCATTCTATGTCATTGATGATGCAAAGAAAGCAGTGGAAGCAATCTGCC
 
. : . : . : . : . : . :
JMSF005M01- CCGGTGTTGTCTCCTGTGCTGAT
JMSF009F03- C
JMSF030E14- CCGGTGTTGTCTCCTGTGCTGATATTTTGGCGTTTGCAGCAAGAGATGCTGTTGTCATAG
rJMSF030E14+ GGCGTTTGCAGCAAGAGATGCTGTTGTCATAG
rJMSF009F03+ GGCGTTTGCAGCAAGAGATGCTGGTGTCATAG
                      ____________________________________________________________
consensus CCGGTGTTGTCTCCTGTGCTGATATTTTGGCGTTTGCAGCAAGAGATGCTGTTGTCATAG
 
. : . : . : . : . : . :
JMSF030E14- CTGGTGGGCCATACTGGGATGTCCCAAAAGGAAGAAAAGATGGGAGAGTATCAAAAGCCA
rJMSF030E14+ CTGGTGGGCCATACTGGGATGTCCCAAAAGGAAGAAAAGATGGGAGAGTATCAAAAGCCA
rJMSF009F03+ CTGGTGGGCCATACTGGGATGTCCCAAAAGGAAGAAAAGATGGGAGAGTATCAAAAGCCA
                      ____________________________________________________________
consensus CTGGTGGGCCATACTGGGATGTCCCAAAAGGAAGAAAAGATGGGAGAGTATCAAAAGCCA
 
. : . : . : . : . : . :
JMSF030E14- GTGAAACCACACAACTGCCAGGTCCAGCCTTCAACCTATCTCAACTGCAGAAGAGCTTCT
rJMSF030E14+ GTGAAACCACACAACTGCCAGGTCCAGCCTTCAACCTATCTCAACTGCAGAAGAGCTTCT
rJMSF009F03+ GTGAAACCACACAACTGCCAGGTCCAGCCTTCAACCTATCTCAACTGCAGAAGAGCTTCT
                      ____________________________________________________________
consensus GTGAAACCACACAACTGCCAGGTCCAGCCTTCAACCTATCTCAACTGCAGAAGAGCTTCT
 
. : . : . : . : . : . :
JMSF030E14- CACAGAGAGGTCTATCAATGGCAGACCTGGTGGCCCTCTCAGGTGGGCACACCATAGGCT
rJMSF030E14+ CACAGAGAGGTCTATCAATGGCAGACCTGGTGGCCCTCTCAGGTGGGCACACCATAGGCT
rJMSF009F03+ CACAGAGAGGTCTATCAATGGCAGACCTGGTGGCCCTCTCAGGTGGGCACACCATAGGCT
                      ____________________________________________________________
consensus CACAGAGAGGTCTATCAATGGCAGACCTGGTGGCCCTCTCAGGTGGGCACACCATAGGCT
 
. : . : . : . : . : . :
JMSF030E14- TCTCCCACTGTTCTTCC
rJMSF030E14+ TCTCCCACTGTTCTTCCTTCAACAACAGACTCCACAACTTCAATGCCACCCATGATGTTG
rJMSF009F03+ TCTCCCACTGTTCTTCCTTCAACAACAGACTCCACAACTTCAATGCCACCCATGATGTTG
                      ____________________________________________________________
consensus TCTCCCACTGTTCTTCCTTCAACAACAGACTCCACAACTTCAATGCCACCCATGATGTTG
 
. : . : . : . : . : . :
rJMSF005M03+ CAGCA
rJMSF030E14+ ATCCCACACTTCACCCCACCATTGCTGCCAACCTGAAAACCATCTGTCCCCTGAACAGCA
rJMSF009F03+ ATCCCACACTTCACCCCACCATTGCTGCCAACCTGAAAACCATCTGTCCCCTGAACAGCA
                      ____________________________________________________________
consensus ATCCCACACTTCACCCCACCATTGCTGCCAACCTGAAAACCATCTGTCCCCTGAACAGCA
 
. : . : . : . : . : . :
rJMSF005M03+ GATCCAAGAATGCAGGAACCAGCATGGACCCTTCTTCCACANCTTTTGACAACAACTATT
rJMSF030E14+ GATCCAAGAATGCAGGAACCAGCATGGACCCTTCTTCCACAACTTTTGACAACAACTATT
rJMSF009F03+ GATCCAAGAATGCAGGAACCAGCATGGACCCTTCTTCCACAACTTTTGACAACAACTATT
                      ____________________________________________________________
consensus GATCCAAGAATGCAGGAACCAGCATGGACCCTTCTTCCACAACTTTTGACAACAACTATT
 
. : . : . : . : . : . :
rJMSF005M03+ ACAAGCTAATTGTCCAGGGGAAAAGCCTCTTCTCCTCAGACCAGGCTTTGTTCACCAACC
rJMSF030E14+ ACAAGCTAATTGTCCAGGGGAAAAGCCTCTTCTCCTCAGACCAGGCTTTGTTCACCAACC
rJMSF009F03+ ACAAGCTAATTGTCCAGGGGAAAAGCCTCTTCTCCTCAGACCAGGCTTTGTTCACCAACC
                      ____________________________________________________________
consensus ACAAGCTAATTGTCCAGGGGAAAAGCCTCTTCTCCTCAGACCAGGCTTTGTTCACCAACC
 
. : . : . : . : . : . :
rJMSF005M03+ CAAACACCAAGTCCCTGGTTTTGCAGTATGCCAACTCAAAACAGGCTTTCTCTAAGGCTT
rJMSF030E14+ CAAACACCAAGTCCCTGGTTTTGCAGTATGCCAACTCAAAACAGGCTTTCTTTAAGGCTT
rJMSF009F03+ CAAACACCAAGTCCCTGGTTTTGCAGTATGCCAACTCAAAACAGGCTTTCTTTAAGGCTT
                      ____________________________________________________________
consensus CAAACACCAAGTCCCTGGTTTTGCAGTATGCCAACTCAAAACAGGCTTTCTTTAAGGCTT
 
. : . : . : . : . : . :
rJMSF005M03+ TNGCAAACTCCATGATCAAGATGAGCAGCATTACAGGAGGACAGGAAGTCAGAAAATATT
rJMSF030E14+ TTGCAAACTCCATGATCAAGATGAGCAGCATTACAGGAGGACAGGAAGTCAGAAAATATT
rJMSF009F03+ TTGCAAACTCCATGATCAAGATGAGCAGCATTACAGGAGGACAGGAAGTCAGAAAATATT
                      ____________________________________________________________
consensus TTGCAAACTCCATGATCAAGATGAGCAGCATTACAGGAGGACAGGAAGTCAGAAAATATT
 
. : . : . : . : . : . :
rJMSF005M03+ GCTGGATAGCTAATTAGATTAGCCTCCAAAGTNTATATCCTTTCTAGTGAGTGTAGATAG
rJMSF030E14+ GCTGGATAGCTAATTAGATTAGCCTCCAAAGTTTATATCCTTTCTAGTGAGTGTAGATAG
rJMSF009F03+ GCTGGATAGCTAATTAGATTAGCCTCCAAAGTTTATATCCTTTCTAGTGAGTGTAGATAG
                      ____________________________________________________________
consensus GCTGGATAGCTAATTAGATTAGCCTCCAAAGTTTATATCCTTTCTAGTGAGTGTAGATAG
 
. : . : . : . : . : . :
rJMSF005M03+ TCCAGCAAAATGGGCTGTCTTTCATATATAAATCTCATTTTCTTTCTTTACCTGCAGAGT
rJMSF030E14+ TCCAGCAAAATGGGCTGTCTTTCATATATAAATCTCATTTTCTTTCTTTACCTGCAGAGT
rJMSF009F03+ TCCAGCAAAATGGGCTGTCTTTCATATATAAATCTCATTTTCTTTCTTTACCTGCAGAGT
                      ____________________________________________________________
consensus TCCAGCAAAATGGGCTGTCTTTCATATATAAATCTCATTTTCTTTCTTTACCTGCAGAGT
 
. : . : . : . : . : . :
rJMSF005M03+ ATATGTAATGGATTGCAATAACTAAGATAATTAGTGG
rJMSF030E14+ ATATGTAATGGATTGCAATAACTAAGATAATTAGTGGATTGCTTTACTCCCAAAATCAT
rJMSF009F03+ ATATGTAATGGATTGCAATAACTAAGATAATTAGTGGATTGCTTTACTCCCAAAATCATT
                      ____________________________________________________________
consensus ATATGTAATGGATTGCAATAACTAAGATAATTAGTGGATTGCTTTACTCCCAAAATCATT