clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007L04 | Sequence | 563 | 004186 (7) | ref|XP_010257716.1| | 2e-22 | PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera] | 707 | 004186 (7) | ref|XP_010257716.1| | 2e-67 | PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera] |
JMFF024K20 | Sequence | 489 | 004186 (7) | ref|XP_010257716.1| | 4e-21 | PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera] | 722 | 004186 (7) | ref|XP_010257716.1| | 3e-69 | PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera] |
JMFF042N12 | Sequence | 645 | 004186 (7) | ref|XP_010257716.1| | 3e-33 | PREDICTED: uncharacterized protein At5g19025-like [Nelumbo nucifera] | 603 | 004186 (7) | ref|XP_009595427.1| | 4e-62 | PREDICTED: uncharacterized protein At5g19025-like [Nicotiana tomentosiformis] |
JMSF006D10 | Sequence | 268 | 023118 | 411 | 004186 (7) | ref|XP_009595427.1| | 9e-51 | PREDICTED: uncharacterized protein At5g19025-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF042N12- GGCACCTATATAAATTAACTGCATCCCAATATA
____________________________________________________________
consensus GGCACCTATATAAATTAACTGCATCCCAATATA
. : . : . : . : . : . :
JMFF007L04- CTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
JMFF024K20- CTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
JMFF042N12- CGTGTCTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
____________________________________________________________
consensus CGTGTCTCTCTGTCTCCGTCCCTGTTCTCATCTCTTCAGAATCCGATTATCATCTCTAGA
. : . : . : . : . : . :
JMFF007L04- ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
JMFF024K20- ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
JMFF042N12- ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
____________________________________________________________
consensus ATCCAATTCCCAGTATTCCCAATCGAGAATCCGCGGAATTTGATTGATAAACGAAAGCGG
. : . : . : . : . : . :
JMFF007L04- GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
JMFF024K20- GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
JMFF042N12- GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
____________________________________________________________
consensus GGCGGGGGAGGCGAGAAGAAATGAGGTTACCCATGGTGGATTGCCGGAGTTTGATCGAGT
. : . : . : . : . : . :
JMFF007L04- TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
JMFF024K20- TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
JMFF042N12- TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
rJMFF024K20+ TTTGCCGGGCGTTCGAGCCGCGCAGGANCCGGAACCGATTCAATTCCCAATTCCAATTCC
rJMFF007L04+ TTCCAATTCCAATTCC
____________________________________________________________
consensus TTTGCCGGGCGTTCGAGCCGCGCAGGAACCGGAACCGATTCAATT-CCAATTCCAATTCC
. : . : . : . : . : . :
JMFF007L04- CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
JMFF024K20- CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
JMFF042N12- CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
rJMFF024K20+ CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
rJMFF007L04+ CAGAGCAAGAACAGGCTGTCCNGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
____________________________________________________________
consensus CAGAGCAAGAACAGGCTGTCCCGGAATAAGAATCACTGCTGCTTCAATCTCCTAGCTCAT
. : . : . : . : . : . :
JMFF007L04- CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
JMFF024K20- CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
JMFF042N12- CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF024K20+ CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF007L04+ CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
rJMFF042N12+ ACTGATCCTGGTT
____________________________________________________________
consensus CCCTTTTGCAGCGATCACTCCCCCATGGCTGCTGTCGATGCGGTTATACTGATCCTGGTT
. : . : . : . : . : . :
JMFF007L04- TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
JMFF024K20- TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
JMFF042N12- TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF024K20+ TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF007L04+ TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
rJMFF042N12+ TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
____________________________________________________________
consensus TTGGGATCCCTAGGGTTCCTGATTATCCCCTATTTCAAATCGGTGACGTGCCTGGTTTTC
. : . : . : . : . : . :
JMFF007L04- CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
JMFF024K20- CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
JMFF042N12- CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF024K20+ CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF007L04+ CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
rJMFF042N12+ CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
____________________________________________________________
consensus CCCGTGCTGTTCGACGCCGTCGTGGAGGTCATCAGCGACGCCCCCGTCGCGTATTTCGTC
. : . : . : . : . : . :
JMFF007L04- GGCCTCCTGGCGACGCCTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
JMFF024K20- GGCCTCCTGGCGACG
JMFF042N12- GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF024K20+ GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF007L04+ GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
rJMFF042N12+ GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
____________________________________________________________
consensus GGCCTCCTGGCGACG-CTCCTGGGGGTCGTCGTCGTGATCGTCGCCTGGGAGATCATCGA
. : . : . : . : . : . :
JMFF007L04- TCTGCGCTCCCGGCGATGCGGGAACCCCA
JMFF042N12- TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF024K20+ TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF007L04+ TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMFF042N12+ TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
rJMSF006D10+ TGCGGGAATCCCAAGTGTCAGGGCTTGAGGAAAGCGGTGGAGTT
____________________________________________________________
consensus TCTGCGCTCCCGGCGATGCGGGAACCCCAATTGCCAGGGATTGCGGAAAGCGGTTGAGTT
. : . : . : . : . : . :
JMFF042N12- CGATATCCAGCTCG
rJMFF024K20+ CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMFF007L04+ CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMFF042N12+ CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
rJMSF006D10+ TGATATCCAGCTCGAGTCGGAGGAGTGCCTCAAGTATTTGCCCCCGGACGCGACCTTCAA
____________________________________________________________
consensus CGATATCCAGCTCGAGTCCGAGGAGTGCCTCAAGTATTTGCCGCCCGACGCGAGCGTCAA
. : . : . : . : . : . :
rJMFF024K20+ CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
rJMFF007L04+ CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCACGATCGCAAGGA
rJMFF042N12+ CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
rJMSF006D10+ CGGGAACGCCTTCTATAATTACGGCGTGAAGCCGTTGGAACTGGGGCAGGATCGCAAGGA
____________________________________________________________
consensus CGGGAACGTGTTCTACAATTACGGGGCGAAACCGTTGGACCTGGGCCAGGATCGCAAGGA
. : . : . : . : . : . :
rJMFF024K20+ GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMFF007L04+ GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMFF042N12+ GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
rJMSF006D10+ GCTGGAGGCGGAGCTGAAGAGGATGGCACCGCCCAACGGCCGCACCGTTCTCATCTTCCG
____________________________________________________________
consensus GCTGGAGGCGGAGCTCAAGCGGATGGCGCCTCTCAACGGCCGCACCGTCCTCATCTTCCG
. : . : . : . : . : . :
rJMFF024K20+ AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC
rJMFF007L04+ AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC
rJMFF042N12+ AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTC
rJMSF006D10+ GGCACCCTGCGGCTGCCCTGCAGGTAGATTGGAGGTTTGGGGGAATAAGAAAATTCNTAG
____________________________________________________________
consensus AGCGCCCTGCGGATGCCCGGCAGGTAGATTGGAAGTTTGGGGGAATAAGAAAATTCNTAG
. : . : . : . : . : . :
rJMSF006D10+ AGTTAAGAAATNAATTTTATACGGAGGGAGGGAGTCCGTAGAGTTATAGCTCTTAGTTTG
____________________________________________________________
consensus AGTTAAGAAATNAATTTTATACGGAGGGAGGGAGTCCGTAGAGTTATAGCTCTTAGTTTG
. : . : . : . : . : . :
rJMSF006D10+ TTATTGTTCCAGCAGGATCCATCCTNATACCAATGATGAATAAANTAGGAGATATCATCA
____________________________________________________________
consensus TTATTGTTCCAGCAGGATCCATCCTNATACCAATGATGAATAAANTAGGAGATATCATCA