Contig 004165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006M13Sequence639004165 (9)gb|KHG29399.1|2e-76hypothetical protein F383_12832 [Gossypium arboreum]
JMFF020L23Sequence531001799 (5)ref|XP_009599717.1|2e-37PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl776004165 (9)gb|KHG29399.1|2e-90hypothetical protein F383_12832 [Gossypium arboreum]
JMFF027D07Sequence613004165 (9)gb|KHG29399.1|1e-93hypothetical protein F383_12832 [Gossypium arboreum]
JMFF037I03Sequence593001799 (5)ref|XP_009599717.1|1e-53PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl804004165 (9)gb|KHG29399.1|3e-93hypothetical protein F383_12832 [Gossypium arboreum]
JMFF050G18Sequence608001799 (5)ref|XP_009599717.1|2e-48PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl571004165 (9)ref|XP_006469672.1|1e-46PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl
JMFN003O22Sequence644004165 (9)gb|KHG29399.1|4e-84hypothetical protein F383_12832 [Gossypium arboreum]
JMFS146H08Sequence626004165 (9)ref|XP_006469672.1|6e-61PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl
JMSF009N16Sequence695004165 (9)gb|KHG29399.1|8e-91hypothetical protein F383_12832 [Gossypium arboreum]
JMSF046K15Sequence764001799 (5)ref|XP_009599717.1|1e-79PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxogl792004165 (9)gb|KHG29399.1|5e-84hypothetical protein F383_12832 [Gossypium arboreum]

Alignment

This contig is upended


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rJMFF027D07+                       TTTATTAAAGCTGCAGTTAGTGCACTCCAGAATCAG-CCAATAGTTA
rJMSF046K15+                                GCTGCAGTTAGTGCACTCCAGAATCAGCCCAATAGTTA
rJMFF006M13+                                                    GAATCAG-CCAATAGTTA
rJMFF020L23+                              AAGCTGCAGTTAGTGCACTCCAGAATCAG-CCAATAGTTA
rJMSF009N16+                                GCTGCAGTTAGTGCACTCCAGAATCAG-CCAATAGTTA
rJMFF037I03+                                GCTGCAGTTAGTGCACTCCAGAATCAG-CCAATAGTTA
                      ____________________________________________________________
consensus                          TTTATTAAAGCTGCAGTTAGTGCACTCCAGAATCAG-CCAATAGTTA
 
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rJMFF027D07+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
JMFN003O22-                                                         CATCAGTATAGCTG
rJMSF046K15+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
rJMFF006M13+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
rJMFF020L23+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
rJMSF009N16+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
rJMFF037I03+          ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
                      ____________________________________________________________
consensus             ATGCAGTGATTGATGGTGATGACATTATATATAGAGACTACATAGACATCAGTATAGCTG
 
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rJMFF027D07+          TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
JMFN003O22-           TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
rJMSF046K15+          TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
rJMFF006M13+          TTGGCACCCCAAAGGGCCNTTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
rJMFF020L23+          TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
rJMSF009N16+          TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
rJMFF037I03+          TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
                      ____________________________________________________________
consensus             TTGGCACCCCAAAGGGCC-TTGTTGTCCCAGTTATCCGCGATGCTGAGAAGATGAACTTT
 
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rJMFF027D07+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
JMFN003O22-           GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
rJMSF046K15+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
rJMFF006M13+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
rJMFF020L23+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
rJMSF009N16+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
rJMFF037I03+          GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
JMFS146H08+                                          CTAAAAAGGCTAATGACGGAAGTATATCT
                      ____________________________________________________________
consensus             GCTGATATAGAAAAGACAATTAATGCACTGGCTAAAAAGGCTAATGACGGAAGTATATCT
 
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rJMFF027D07+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
JMFN003O22-           ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMSF046K15+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMFF006M13+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMFF020L23+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMSF009N16+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMFF037I03+          ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
JMFS146H08+           ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
rJMFF050G18+                                       GATATCAAATGGTGGTGTTTATGGAAGTCTT
                      ____________________________________________________________
consensus             ATTGATGAGATGGCTGGCGGATCATTCACGATATCAAATGGTGGTGTTTATGGAAGTCTT
 
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rJMFF027D07+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
JMFN003O22-           CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMSF046K15+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMFF006M13+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMFF020L23+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMSF009N16+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMFF037I03+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
JMFS146H08+           CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
rJMFF050G18+          CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
                      ____________________________________________________________
consensus             CTGAGTACCCCCATCATCAATCCGCCTCAGTCTGCCATCCTGGGCATGCACTCAATTGTG
 
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rJMFF027D07+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
JMFN003O22-           AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMSF046K15+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMFF006M13+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMFF020L23+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMSF009N16+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMFF037I03+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
JMFS146H08+           AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
rJMFF050G18+          AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
                      ____________________________________________________________
consensus             AACCGTCCAATGGTCGTCGGAGGCAACATTGTTTCTAGACCAATGATGTACATTGCCTTG
 
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rJMFF027D07+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
JMFN003O22-           ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMSF046K15+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMFF006M13+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMFF020L23+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMSF009N16+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMFF037I03+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
JMFS146H08+           ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
rJMFF050G18+          ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
                      ____________________________________________________________
consensus             ACTTACGATCATAGGCTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGAGAAGGATTAAA
 
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rJMFF027D07+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
JMFN003O22-           GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMSF046K15+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMFF006M13+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMFF020L23+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMSF009N16+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMFF037I03+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
JMFS146H08+           GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
rJMFF050G18+          GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
                      ____________________________________________________________
consensus             GATGTGGTTGAAGATCCTCGCCGCTTGCTCCTTGACATATGATTTCGGAGCTTGGTTTGA
 
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rJMFF027D07+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
JMFN003O22-           TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMSF046K15+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMFF006M13+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMFF020L23+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMSF009N16+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMFF037I03+          TTACGTATATTCCTGATTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
JMFS146H08+           TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
rJMFF050G18+          TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
                      ____________________________________________________________
consensus             TTACGTATATTCCTGAGTTGGTATTTTGAGTTGGTATTTTACTCAAATCTTGAGCAAGAA
 
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rJMFF027D07+          GAATAAATGTACTGATTCCAAAGTTTTG                                
JMFN003O22-           GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMSF046K15+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMFF006M13+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMFF020L23+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMSF009N16+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMFF037I03+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
JMFS146H08+           GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
rJMFF050G18+          GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
                      ____________________________________________________________
consensus             GAATAAATGTACTGATTCCAAAGTTTTGTAGGGTTTCATAATTATTGCGTTGATCGTAAA
 
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JMFN003O22-           TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACANATTTCT
rJMSF046K15+          TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTCT
rJMFF006M13+          TTATGGGTTGCGGCT                                             
rJMFF020L23+          TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTG-TTTTTTAACAAATTTCT
rJMSF009N16+          TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTC 
rJMFF037I03+          TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTCT
JMFS146H08+           TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTCT
rJMFF050G18+          TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTCT
                      ____________________________________________________________
consensus             TTATGGGTTGCGGCTAGAACACACATGGACTGAGCCCCCTTGTTTTTTTAACAAATTTCT
 
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JMFN003O22-           AGCCGCTGTCATGCAGGGGCTCTATTGCTTT                             
rJMSF046K15+          AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
rJMFF020L23+          AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
rJMFF037I03+          AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
JMFS146H08+           AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
rJMFF050G18+          AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
                      ____________________________________________________________
consensus             AGCCGCTGTCATGCAGGGGCTCTATTGCTTTTGTTACGCTGGAGAATGCGTTGCCTGCGT
 
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rJMSF046K15+          TCTTCTGAAATATACCAAT                                         
rJMFF020L23+          TCTTCTGAAATATACCAAT                                         
rJMFF037I03+          TCTTCTGAAATATACCAATTTCATTTGTGTTTTA                          
JMFS146H08+           TCTTCTGAAATATACCAATTTCATTTGTGTTTTA                          
rJMFF050G18+          TCTTCTGAAATATACCAATTTCATTTGTGTTTTATTTATATTTTATTTATGCTTCTCTGC
                      ____________________________________________________________
consensus             TCTTCTGAAATATACCAATTTCATTTGTGTTTTATTTATATTTTATTTATGCTTCTCTGC