Contig 004161:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050A16Sequence614000961 (7)ref|XP_009623694.1|2e-100PREDICTED: kynurenine--oxoglutarate transaminase-like [Nicotiana tomentosiformi561004161 (6)emb|CDP15807.1|1e-47unnamed protein product [Coffea canephora]
JMSF006K20Sequence341002089 (2)ref|XP_009763495.1|7e-38PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Nicotiana 202004161 (6)
JMSF012K19Sequence447000961 (7)ref|XP_009623694.1|9e-37PREDICTED: kynurenine--oxoglutarate transaminase-like [Nicotiana tomentosiformi758004161 (6)emb|CDP15807.1|4e-107unnamed protein product [Coffea canephora]
JMSF017A09Sequence219000961 (7)755004161 (6)emb|CDP15807.1|2e-107unnamed protein product [Coffea canephora]
JMSF028B18Sequence716000961 (7)ref|XP_009623694.1|2e-91PREDICTED: kynurenine--oxoglutarate transaminase-like [Nicotiana tomentosiformi744004161 (6)emb|CDP15807.1|3e-103unnamed protein product [Coffea canephora]
JMSF046N05Sequence793000961 (7)ref|XP_009784157.1|2e-114PREDICTED: kynurenine--oxoglutarate transaminase [Nicotiana sylvestris]724004161 (6)emb|CDP15807.1|3e-99unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF012K19+                                                    CTCTTCCAGGAATGTATG
rJMSF017A09+                                                     TCTTCCAGGAATGTATG
rJMSF028B18+                                                                 GTATG
                      ____________________________________________________________
consensus                                                       CTCTTCCAGGAATGTATG
 
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rJMSF012K19+          AAAGGACTGTTACCATGAATTCATTGGGGAAGACATTTTCCCTTACGGGCTGGAAAATAG
rJMSF046N05+                      CCATGAATTCATTGGGGAAGACATTTTCCCTTACGGGCTGGAAAATAG
rJMSF017A09+          AAAGGACTGTTACCATGAATTCATTGGGGAAGACATTTTCCCTTACGGGCTGGAAAATAG
rJMSF028B18+          AAAGGACTGNTACCATGAATTCATTGGGGAAGACATTTTCCCTTACGGGCTGGAAAATAG
                      ____________________________________________________________
consensus             AAAGGACTGTTACCATGAATTCATTGGGGAAGACATTTTCCCTTACGGGCTGGAAAATAG
 
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rJMSF012K19+          GTTGGGCAATAGCTCCCCCACATTTGACCTGGGGAATAAGGCAGGCCCATTCTTTCCTTA
rJMSF046N05+          GTTGGGCAATAGCTCCCCCACATTTGACCTGGGGAATAAGGCAGGCCCATTCTTTCCTTA
rJMSF017A09+          GTTGGGCAATAGCTCCCCCACATTTGACCTGGGGAATAAGGCAGGCCCATTCTTTCCTTA
rJMSF028B18+          GTTGGGCAATAGCTCCCCCACATTTGACCTGGGGAATAAGGCAGGCCCATTCTTTCCTTA
                      ____________________________________________________________
consensus             GTTGGGCAATAGCTCCCCCACATTTGACCTGGGGAATAAGGCAGGCCCATTCTTTCCTTA
 
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rJMSF012K19+          CCTTTGCTACATCTACTCCGATGCAATATGCTGCTGCAACAGCCCTCAGAGCACCGGATT
rJMSF046N05+          CCTTTGCTACATCTACTCCGATGCAATATGCTGCTGCAACAGCCCTCAGAGCACCGGATT
rJMSF017A09+          CCTTTGCTACATCTACTCCGATGCAATATGCTGCTGCAACAGCCCTCAGAGCACCGGATT
rJMSF028B18+          CCTTTGCTACATCTACTCCGATGCAATATGCTGCTGCAACAGCCCTCAGAGCACCGGATT
                      ____________________________________________________________
consensus             CCTTTGCTACATCTACTCCGATGCAATATGCTGCTGCAACAGCCCTCAGAGCACCGGATT
 
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rJMSF012K19+          CTTATTATGTGGAGCTTAAGAGGGATTACTCAGCTAAGAAGGCCATATTGGTGGATGGGT
rJMSF046N05+          CTTATTATGTGGAGCTTAAGAGGGATTACTCAGCTAAGAAGGCCATATTGGTGGATGGGT
rJMSF017A09+          CTTATTATGTGGAGCTTAAGAGGGATTACTCAGCTAAGAAGGCCATATTGGTGGATGGGT
rJMSF028B18+          CTTATTATGTGGAGCTTAAGAGGGATTACTCAGCTAAGAAGGCCATATTGGTGGATGGGT
rJMFF050A16+                                             AAGAAGGCCATATTGGTGGATGGGT
                      ____________________________________________________________
consensus             CTTATTATGTGGAGCTTAAGAGGGATTACTCAGCTAAGAAGGCCATATTGGTGGATGGGT
 
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rJMSF012K19+          TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
rJMSF046N05+          TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
rJMSF017A09+          TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
rJMSF028B18+          TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
rJMFF050A16+          TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
                      ____________________________________________________________
consensus             TGAAGGCTGCAGGCTTCACAGTGTATCCATCAAGTGGAACATACTTTGTGATAGTGGATC
 
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rJMSF012K19+          ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
rJMSF046N05+          ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
rJMSF017A09+          ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
rJMSF028B18+          ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
rJMFF050A16+          ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
                      ____________________________________________________________
consensus             ACACTCCTTTTGGGTTGAAAGATGATGTTGCGTTTTGTGAGTATCTCATAAAGGAGGTTG
 
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rJMSF012K19+          GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
rJMSF046N05+          GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
rJMSF017A09+          GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
rJMSF028B18+          GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
rJMFF050A16+          GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
                      ____________________________________________________________
consensus             GAGTTGTAGCCATCCCAACCAGTGTTTTTTATCTAAATCCTGAAGATGGCAAGAATCTTG
 
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rJMSF012K19+          TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
rJMSF046N05+          TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
rJMSF006K20+                                                     TGTTGAGAGGATGAAAG
rJMSF017A09+          TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
rJMSF028B18+          TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
rJMFF050A16+          TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
                      ____________________________________________________________
consensus             TAAGATTTACCTTCTGCAAAGATGAGCAGACACTCAGAAGTGCTGTTGAGAGGATGAAAG
 
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rJMSF012K19+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACAGCAGGTGCAGGAGCAATAGAAGTGG
rJMSF046N05+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAGAAGTGG
rJMSF006K20+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAGAAGTGG
rJMSF017A09+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAGAAGTGG
rJMSF028B18+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAGAAGTGG
rJMFF050A16+          AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAG-AGTGG
                      ____________________________________________________________
consensus             AAAAGTTGCCAAAGAAATGAAAAGAAGCCCCAACA---GGTGCAGGAGCAATAGAAGTGG
 
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rJMSF012K19+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
rJMSF046N05+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
rJMSF006K20+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGTTACTTGCACATNTGGGT
rJMSF017A09+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
rJMSF028B18+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
rJMFF050A16+          TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
                      ____________________________________________________________
consensus             TGGGTGCGCCTAAAATTCCTAAAAATAATAGGTGACAAGCAGCTACTTGCACATCTGGGT
 
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rJMSF012K19+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
rJMSF046N05+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
rJMSF006K20+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATT         
rJMSF017A09+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
rJMSF028B18+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
rJMFF050A16+          TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
                      ____________________________________________________________
consensus             TAGTTTGCACTTTACAAGTGAAGAATTTACCAGCATCATCATTCTCATATTATTGCTTCT
 
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rJMSF012K19+          ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
rJMSF046N05+          ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
rJMSF017A09+          ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
rJMSF028B18+          ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
rJMFF050A16+          ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
                      ____________________________________________________________
consensus             ATTAGCCTTTTCTATTCTCTCCTTAGTACATGGTTGCTGAAAGCCTATTCTTGGGGTTTT
 
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rJMSF012K19+          CTCACAGAT                                                   
rJMSF046N05+          CTCACAGATTGTACCAAAT                                         
rJMSF017A09+          CTCACAGATTGTACCAAAT                                         
rJMSF028B18+          CTCACAGATTGTACCAAAT                                         
rJMFF050A16+          CTCACAGATTGTACCAAATTGTTTTTTCCTAGAAATATGATTACACACTAGTTGGCTGCC
                      ____________________________________________________________
consensus             CTCACAGATTGTACCAAATTGTTTTTTCCTAGAAATATGATTACACACTAGTTGGCTGCC