Contig 004150:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017H13Sequence564005946 (5)ref|XP_009783020.1|5e-30PREDICTED: endoglucanase 2 [Nicotiana sylvestris]714004150 (6)ref|XP_009610927.1|4e-99PREDICTED: endoglucanase 2-like [Nicotiana tomentosiformis]
JMFF036F14Sequence557005946 (5)ref|XP_009783020.1|8e-29PREDICTED: endoglucanase 2 [Nicotiana sylvestris]713004150 (6)ref|XP_009610927.1|7e-100PREDICTED: endoglucanase 2-like [Nicotiana tomentosiformis]
JMFF048P15Sequence405021715313004150 (6)
JMFF049P02Sequence591005946 (5)ref|XP_009783020.1|9e-37PREDICTED: endoglucanase 2 [Nicotiana sylvestris]597004150 (6)ref|XP_009610927.1|6e-69PREDICTED: endoglucanase 2-like [Nicotiana tomentosiformis]
JMSF041E18Sequence819005946 (5)ref|XP_009783020.1|9e-66PREDICTED: endoglucanase 2 [Nicotiana sylvestris]735004150 (6)ref|XP_009610927.1|6e-108PREDICTED: endoglucanase 2-like [Nicotiana tomentosiformis]
JMSF041G05Sequence814005946 (5)ref|XP_009783020.1|2e-88PREDICTED: endoglucanase 2 [Nicotiana sylvestris]687004150 (6)ref|XP_009610927.1|5e-92PREDICTED: endoglucanase 2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF041E18+                                                     TTGAAGTATAGGAGCAC
                      ____________________________________________________________
consensus                                                        TTGAAGTATAGGAGCAC
 
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rJMSF041E18+          TGCAGAANGCAGTTATGTGTGGGCTCTTACCGAAATCTCCTACAGCCACTTCCAGCAGAA
rJMSF041G05+                                                  TACAGCCACTTTCAGCAGAA
rJMFF017H13+                                                  TACAGCCACTTCCAGCAGAA
rJMFF036F14+                                                  TACAGCCACTTCCAGCAGAA
                      ____________________________________________________________
consensus             TGCAGAANGCAGTTATGTGTGGGCTCTTACCGAAATCTCCTACAGCCACTTCCAGCAGAA
 
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rJMSF041E18+          CCGATTCGGG-TTTAGTATGGATAAGCCAATGGAACGCTTTGCAGCATCCGGTAGCCTCG
rJMSF041G05+          CCGATTCGGGTTTTAGTATGGATAAGCCAATGGAACGCTTTGCAGCATCCGGTAGCCTCG
rJMFF017H13+          CCGATTCGGG-TTTAGTATGGATAAGCCAATGGAACGCTTTGCAGCATCCGGTAGCCTCG
rJMFF036F14+          CCGATTCGGG-TTTAGTATGGATAAGCCAATGGAACGCTTTGCAGCATCCGGTAGCCTCG
                      ____________________________________________________________
consensus             CCGATTCGGG-TTTAGTATGGATAAGCCAATGGAACGCTTTGCAGCATCCGGTAGCCTCG
 
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rJMSF041E18+          GCNTTCTTAGCTGTAGTCTACAGCGATTACATGCTTTCGTCTCGCACTGCAAAGATAACG
rJMSF041G05+          GCCTTCTTAGCTGTAGTCTACAGCGATTACATGCTTTCGTCTCGCACTGCAAAGATAACG
rJMFF017H13+          GCCTTCTTAGCTGTAGTCTACAGCGATTACATGCTTTCGTCTCGCACTGCAAAGATAACG
rJMFF036F14+          GCCTTCTTAGCTGTAGTCTACAGCGATTACATGCTTTCGTCTCGCACTGCAAAGATAACG
rJMFF049P02+                                                        CTGCAAAGATAACG
                      ____________________________________________________________
consensus             GCCTTCTTAGCTGTAGTCTACAGCGATTACATGCTTTCGTCTCGCACTGCAAAGATAACG
 
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rJMSF041E18+          TGCGATGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
rJMSF041G05+          TGCGATGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
rJMFF017H13+          TGCGCTGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
rJMFF036F14+          TGCGATGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
rJMFF049P02+          TGCGATGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
                      ____________________________________________________________
consensus             TGCGATGGGAAATATTATACCCCGTCTGATCTGCGGAAGTTTGCCATGTCACAGGCTGAT
 
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rJMSF041E18+          TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
rJMSF041G05+          TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
rJMFF017H13+          TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
rJMFF036F14+          TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
rJMFF049P02+          TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
                      ____________________________________________________________
consensus             TATGTTTTGGGTGACAATCCAATGAAGATGAGTTATCTCGTTGGGTATGGGGACAACTAC
 
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rJMSF041E18+          CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
rJMSF041G05+          CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
rJMFF017H13+          CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
rJMFF036F14+          CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
rJMFF049P02+          CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
                      ____________________________________________________________
consensus             CCGAAATACGTTCACCATCGAGGAGCCTCGATACCCACCGATGCAACAACCGGGTGCAAA
 
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rJMSF041E18+          GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACGTTGCGGTTGGGGGACTC
rJMSF041G05+          GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACGTTGCGGTTGGGGGACTC
rJMFF017H13+          GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACCTTGCGGTTGGGGGACTC
rJMFF036F14+          GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACGTTGCGGTTGGGGGACTC
rJMFF049P02+          GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACGTTGCGGTTGGGGGACTC
                      ____________________________________________________________
consensus             GATGGCTTCAAGTGGCTCGAATCCACCCAACCTAACCCCAACGTTGCGGTTGGGGGACTC
 
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rJMSF041E18+          GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
rJMSF041G05+          GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
rJMFF017H13+          GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
rJMFF036F14+          GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
rJMFF049P02+          GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
rJMFF048P15+                                                         CTCGATGCAAGCG
                      ____________________________________________________________
consensus             GTCGGTGGACCATTTCTAAACGAGACGTATATTGATTCGAGGAACAACTCGATGCAAGCG
 
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rJMSF041E18+          GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
rJMSF041G05+          GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
rJMFF017H13+          GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
rJMFF036F14+          GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
rJMFF049P02+          GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
rJMFF048P15+          GAGCCCACGGCCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
                      ____________________________________________________________
consensus             GAGCCCACGACCTACAACAGTGCAATCATCGTCGGCCTTCTTTCAGGTTTGGTTACGACC
 
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rJMSF041E18+          TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
rJMSF041G05+          TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAGTCCACCGTTATCTCG
rJMFF017H13+          TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
rJMFF036F14+          TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
rJMFF049P02+          TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
rJMFF048P15+          TCTTCAGTTGTTGGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
                      ____________________________________________________________
consensus             TCTTCAGTTGTTCGCTCTTTCACTTGAGGTAGGCTTCACACGCAATCCACCGTTATCTCG
 
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rJMSF041E18+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
rJMSF041G05+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
rJMFF017H13+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
rJMFF036F14+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
rJMFF049P02+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
rJMFF048P15+          CTCGTGTCATCGTATATATAGCTGTGTGCACACATGTCTGATAGTATATTGCATGTTTTG
                      ____________________________________________________________
consensus             CTCGTGTCATCGTATATATAGCTGTGTGCACACATCTCTGATATGATATTGCATTATTTG
 
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rJMSF041E18+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAAAATG-AGTTTTGTAG
rJMSF041G05+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAAAATG-AGTTTTGTAG
rJMFF017H13+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAA               
rJMFF036F14+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAAAATG-AGTTTTGTAG
rJMFF049P02+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAAAATG-AGTTTTGTAG
rJMFF048P15+          GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAATACGTAGTTTTGTAG
                      ____________________________________________________________
consensus             GATCAACTTCTATGTTGTACCCTTATTAGTTTGTGTTTAAAGCAAAATG-AGTTTTGTAG
 
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rJMSF041G05+          TGTG                                                        
rJMFF036F14+          TGTGTAAAC                                                   
rJMFF049P02+          TGTGTAAACATATAATCTATGTTT                                    
rJMFF048P15+          TGTGTAAACATATAATCTATGTTTGTGCAAGTAAAGGTTTTTATGATCTGCCAAAAAAAC
                      ____________________________________________________________
consensus             TGTGTAAACATATAATCTATGTTTGTGCAAGTAAAGGTTTTTATGATCTGCCAAAAAAAC