Contig 004148:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048M09Sequence625006447 (4)ref|XP_009598882.1|2e-36PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N575004148 (4)gb|ACU19049.1|1e-57unknown [Glycine max]
JMSF010A05Sequence262006447 (4)796004148 (4)ref|XP_009598882.1|2e-144PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N
JMSF014A03Sequence293006447 (4)778004148 (4)ref|XP_009598882.1|3e-130PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N
JMSF049P23Sequence688006447 (4)ref|XP_009598882.1|3e-34PREDICTED: putative peptide chain release factor 1, mitochondrial isoform X2 [N664004148 (4)gb|KDO53115.1|1e-91hypothetical protein CISIN_1g0170092mg, partial [Citrus sinensis] gb|KDO53116.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010A05+ TATGTGAGATGGGGAGAGAAGCAGCNGTACAGAACCAAAGTAGTTGAG
                      ____________________________________________________________
consensus TATGTGAGATGGGGAGAGAAGCAGCNGTACAGAACCAAAGTAGTTGAG
 
. : . : . : . : . : . :
rJMSF010A05+ AAGTCTCCTGGAGAAGAGGCTGGGATTAAATCAGCTACAGTTGAAGNTGAAGGTCGATAT
rJMSF014A03+ GGGATTAANTCAGCTACAGTTGAAGTTGAAGGTCGATAT
                      ____________________________________________________________
consensus AAGTCTCCTGGAGAAGAGGCTGGGATTAAATCAGCTACAGTTGAAGTTGAAGGTCGATAT
 
. : . : . : . : . : . :
rJMSF010A05+ GCATATGGTTATTTATCTGGAGAGAAAGGAACCCATAGAATTGTGCGACAATCTCCTTTC
rJMSF014A03+ GCATATGGTTATTTATCTGGAGAGAAAGGAACCCATAGAATTGTGCGACAATCTCCTTTC
                      ____________________________________________________________
consensus GCATATGGTTATTTATCTGGAGAGAAAGGAACCCATAGAATTGTGCGACAATCTCCTTTC
 
. : . : . : . : . : . :
rJMSF010A05+ AATGCTAAAGGCCTTCGCCAGACAAGCTTCTCTGGTGTCGAGGTCATGCCTCTTCTTCCC
rJMSF014A03+ AATGCTAAAGGCCTTCGCCAGACAAGCTTCTCTGGTGTCGAGGTCATGCCTCTTCTTCCC
                      ____________________________________________________________
consensus AATGCTAAAGGCCTTCGCCAGACAAGCTTCTCTGGTGTCGAGGTCATGCCTCTTCTTCCC
 
. : . : . : . : . : . :
rJMSF010A05+ GAGGACTCAACAGATGTCGAAATACCAGATGAAGACTTGGATATCAGTTTTACCAGAGCA
rJMSF014A03+ GAGGACTCAACAGATGTCGAAATACCAGATGAAGACTTGGATATCAGTTTTACCAGAGCA
rJMSF049P23+ GACTCAACAGATGTCGAAATACCAGATGAAGACTTGGATATCAGTTTTACCAGAGCA
                      ____________________________________________________________
consensus GAGGACTCAACAGATGTCGAAATACCAGATGAAGACTTGGATATCAGTTTTACCAGAGCA
 
. : . : . : . : . : . :
rJMSF010A05+ GGCGGGAAAGGAGGTCAAAATGTTAACAAGGTTGAAACAGCAGTGCGCATTACACATATC
rJMSF014A03+ GGCGGGAAAGGAGGTCAAAATGTTAACAAGGTTGAAACAGCAGTGCGCATTACACATATC
rJMSF049P23+ GGCGGGAAAGGAGGTCAAAATGTTAACAAGGTTGAAACAGCAGTGCGCATTACACATATC
                      ____________________________________________________________
consensus GGCGGGAAAGGAGGTCAAAATGTTAACAAGGTTGAAACAGCAGTGCGCATTACACATATC
 
. : . : . : . : . : . :
rJMSF010A05+ CCCACTGGTGTAGCCGTCCGTTGTACAGAAGAGAGAACACAACTAGCGAACAAGATAAAG
rJMSF014A03+ CCCACTGGTGTAGCCGTCCGTTGTACAGAAGAGAGAACACAACTAGCGAACAAGATAAAG
rJMSF049P23+ CCCACTGGTGTAGCCGTCCGTTGTACAGAAGAGAGAACACAACTAGCGAACAAGATAAAG
rJMFF048M09+ CAGAAGAGAGAACACAACTAGCGAACAAGATAAAG
                      ____________________________________________________________
consensus CCCACTGGTGTAGCCGTCCGTTGTACAGAAGAGAGAACACAACTAGCGAACAAGATAAAG
 
. : . : . : . : . : . :
rJMSF010A05+ GCTCTGAGCCGATTGAAAGCCAAACTGCTAGTCATAGCCGAGGAACAAAGAGCGTCTGAA
rJMSF014A03+ GCTCTGAGCCGATTGAAAGCCAAACTGCTAGTCATAGCCGAGGAACAAAGAGCGTCTGAA
rJMSF049P23+ GCTCTGAGCCGATTGAAAGCCAAACTGCTAGTCATAGCCGAGGAACAAAGAGCGTCTGAA
rJMFF048M09+ GCTCTGAGCCGATTGAAAGCCAAACTGCTAGTCATAGCCGAGGAACAAAGAGCGTCTGAA
                      ____________________________________________________________
consensus GCTCTGAGCCGATTGAAAGCCAAACTGCTAGTCATAGCCGAGGAACAAAGAGCGTCTGAA
 
. : . : . : . : . : . :
rJMSF010A05+ ATAAAGCAAATAAGAGGGGATGCGGTGAAGGCAGAGTGGGGGCAACAAATACGGAACTAC
rJMSF014A03+ ATAAAGCAAATAAGAGGGGATGCGGTGAAGGCAGAGTGGGGGCAACAAATACGGAACTAC
rJMSF049P23+ ATAAAGCAAATAAGAGGGGATGCGGTGAAGGCAGAGTGGGGGCAACAAATACGGAACTAC
rJMFF048M09+ ATAAAGCAAATAAGAGGGGATGCGGTGAAGGCAGAGTGGGGGCAACAAATACGGAACTAC
                      ____________________________________________________________
consensus ATAAAGCAAATAAGAGGGGATGCGGTGAAGGCAGAGTGGGGGCAACAAATACGGAACTAC
 
. : . : . : . : . : . :
rJMSF010A05+ GTGTTTCATCCTTACAAGCTGGTGAAAGATGTTTGGACCGGGTATGAAACTTCAGACATC
rJMSF014A03+ GTGTTTCATCCTTACAAGCTGGTGAAAGATGTTCGGACCGGGTATGAAACTTCAGACATC
rJMSF049P23+ GTGTTTCATCCTTACAAGCTGGTGAAAGATGTTCGGACCGGGTATGAAACTTCAGACATC
rJMFF048M09+ GTGTTTCATCCTTACAAGCTGGTGAAAGATGTTCGGACCGGGTATGAAACTTCAGACATC
                      ____________________________________________________________
consensus GTGTTTCATCCTTACAAGCTGGTGAAAGATGTTCGGACCGGGTATGAAACTTCAGACATC
 
. : . : . : . : . : . :
rJMSF010A05+ ACTTCTGTAATGGATGGGGAGCTAGATCCCTTCATTAGATCCTTCCTCAAGTACAAGTAC
rJMSF014A03+ ACTTCTGTAATGGATGGGGAGCTAGATCCCTTCATTAGATCCTTCCTCAAGTACAAGTAC
rJMSF049P23+ ACTTCTGTAATGGATGGGGAGCTAGATCCCTTCATTAGATCCTTCCTCAAGTACAAGTAC
rJMFF048M09+ ACTTCTGTAATGGATGGGGAGCTAGATCCCTTCATTAGATCCTTCCTCAAGTACAAGTAC
                      ____________________________________________________________
consensus ACTTCTGTAATGGATGGGGAGCTAGATCCCTTCATTAGATCCTTCCTCAAGTACAAGTAC
 
. : . : . : . : . : . :
rJMSF010A05+ AGCATGTCAATGTCCTCTGGTGGAGAATAGATTCTGTGCAAAGTTGAGTAGTCTCATCAG
rJMSF014A03+ AGCATGTCAATGTCCTCTGGTGGAGAATAGATTCTGTGCAAAGTTGAGTAGTCTCATCAG
rJMSF049P23+ AGCATGTCAATGTCCTCTGGTGGAGAATAGATTCTGTGCAAAGTTGAGTAGTCTCATCAG
rJMFF048M09+ AGCATGTCAATGTCCTCTGGTGGAGAATAGATTCTGTGCAAAGTTGAGTAGTCTCATCAG
                      ____________________________________________________________
consensus AGCATGTCAATGTCCTCTGGTGGAGAATAGATTCTGTGCAAAGTTGAGTAGTCTCATCAG
 
. : . : . : . : . : . :
rJMSF010A05+ TCATTAGTACTCCCCAAAAATCCACCAAAATGGGGATGCCATGGAAGTTTTGGTGTATCA
rJMSF014A03+ TCATTAGTACTCCCCAAAAATCCACCAAAATGGGGATGCCATGGAAGTTTTGGTGTATCA
rJMSF049P23+ TCATTAGTACTCCCCAAAAATCCACCAAAATGGGGATGCCATGGAAGTTTTGGTGTATCA
rJMFF048M09+ TCATTAGTACTCCCCAAAAATCCACCAAAATGGGGATGCCATGGAAGTTTTGGTGTATCA
                      ____________________________________________________________
consensus TCATTAGTACTCCCCAAAAATCCACCAAAATGGGGATGCCATGGAAGTTTTGGTGTATCA
 
. : . : . : . : . : . :
rJMSF010A05+ ATCAATTGC
rJMSF014A03+ ATCAATTGCAGTGTGATGAAATAACAATTTATATATAATAGGGAAATCTGCCATTTGTTG
rJMSF049P23+ ATCAATTGCAGTGTGATGAAATAACAATTTATATATAATAGGGAAATCTGCCATTTGTTG
rJMFF048M09+ ATCAATTGCAGTGTGATGAAATAACAATTTATATATAATAGGGAAATCTGCCATTTGTTG
                      ____________________________________________________________
consensus ATCAATTGCAGTGTGATGAAATAACAATTTATATATAATAGGGAAATCTGCCATTTGTTG
 
. : . : . : . : . : . :
rJMSF014A03+ TGTGTTC
rJMSF049P23+ TGTGTTCATGGTGAGATTTCACCCACTCACGACCTGACCCCTTTGATCGATGTTCTCAAA
rJMFF048M09+ TGTGTTCATGGTGAGATTTCACCCACTCACGACCTGACCCCTTTGATCGATGTTCTCAAA
                      ____________________________________________________________
consensus TGTGTTCATGGTGAGATTTCACCCACTCACGACCTGACCCCTTTGATCGATGTTCTCAAA
 
. : . : . : . : . : . :
rJMSF049P23+ AGAAAAA
rJMFF048M09+ AGAAAAACTTATGTCAATTGCATTTTACTTACTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus AGAAAAACTTATGTCAATTGCATTTTACTTACTAAAAAAAAAAAAAAAACTCTCCAGGGT