Contig 004146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F19Sequence172003492 (5)727004146 (5)ref|XP_009602194.1|9e-83PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF017P23Sequence172003492 (5)740004146 (5)ref|XP_009602194.1|3e-85PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF032N08Sequence492011618 (8)dbj|BAO57286.1|6e-62V-type proton ATPase subunit [Ipomoea nil]672004146 (5)ref|XP_009602194.1|2e-70PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi
JMFF048I16Sequence344003492 (5)191004146 (5)
JMSF052P17Sequence694003492 (5)877004146 (5)ref|XP_009602194.1|1e-110PREDICTED: small G protein signaling modulator 2-like [Nicotiana tomentosiformi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052P17+ ACTGCCAGGGTATGAGTGATTTACTTTCTCCAATAATCAGTGTTATAACGGAGGACT
                      ____________________________________________________________
consensus ACTGCCAGGGTATGAGTGATTTACTTTCTCCAATAATCAGTGTTATAACGGAGGACT
 
. : . : . : . : . : . :
rJMSF052P17+ TGAAGCTTTCTGGTGCTTTGTTGGTTTCATGAAGAAGGCTCGACACAACTTCAGGCTCGA
                      ____________________________________________________________
consensus TGAAGCTTTCTGGTGCTTTGTTGGTTTCATGAAGAAGGCTCGACACAACTTCAGGCTCGA
 
. : . : . : . : . : . :
rJMSF052P17+ CGAGGTGGGAATCCGGAGGCAACTCAACATTGTTTCTAAAATCATTAAATCCAAGGATTC
rJMFF017P23+ AAAATCATTAAATCCAAGGATTC
rJMFF008F19+ CAAGGATTC
                      ____________________________________________________________
consensus CGAGGTGGGAATCCGGAGGCAACTCAACATTGTTTCTAAAATCATTAAATCCAAGGATTC
 
. : . : . : . : . : . :
rJMSF052P17+ ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
rJMFF017P23+ ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
rJMFF032N08+ CTGTTTTTTTGTGTATAGGAT
rJMFF008F19+ ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
                      ____________________________________________________________
consensus ACATCTTTACAGACACTTGGAGAAGCTCCAGGCAGAGGACTGTTTTTTTGTGTATAGGAT
 
. : . : . : . : . : . :
rJMSF052P17+ GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF017P23+ GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF032N08+ GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
rJMFF008F19+ GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
                      ____________________________________________________________
consensus GGTGATAGTACTCTTCAGGCGAGAATTGACATTCGACCAAACGCTTTGCTTGTGGGAGGT
 
. : . : . : . : . : . :
rJMSF052P17+ GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF017P23+ GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF032N08+ GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
rJMFF008F19+ GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
                      ____________________________________________________________
consensus GATGTGGGCAGACCAGGCCGCGATTAGGGCCGGGATTGGTAAATCTGCTTGGAGCAGGAT
 
. : . : . : . : . : . :
rJMSF052P17+ CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF017P23+ CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF032N08+ CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
rJMFF008F19+ CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
                      ____________________________________________________________
consensus CAGATTGAGGGCCCCACCAACCGAGGATCTGTTGCTTTATGCAATTGCAGCATCTGTTCT
 
. : . : . : . : . : . :
rJMSF052P17+ GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF017P23+ GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF032N08+ GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
rJMFF008F19+ GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
                      ____________________________________________________________
consensus GCAAAGGAGGAAGCAAATCATAGAGAAATATAGTAGCATGGATGAAATTTTGAGGGAGTG
 
. : . : . : . : . : . :
rJMSF052P17+ CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF017P23+ CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF032N08+ CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
rJMFF008F19+ CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
                      ____________________________________________________________
consensus CAATAACATGGCAGGTCATCTTGATGTATGGAAGCTTCTGGATGATGCCCATGACCTGGT
 
. : . : . : . : . : . :
rJMSF052P17+ GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF017P23+ GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF032N08+ GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
rJMFF008F19+ GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
                      ____________________________________________________________
consensus GGTCACCCTCCATGACAAGATATAGCCACCCAATTCTCCGGTGGCCGCCTGCCACCGCCT
 
. : . : . : . : . : . :
rJMSF052P17+ CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF017P23+ CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF032N08+ CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
rJMFF008F19+ CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
                      ____________________________________________________________
consensus CTCCTCTCCGGTGGGCTTCCGATACTCTCTTCTTCTAGGCTGCCACCCCCTCTCCGGTGG
 
. : . : . : . : . : . :
rJMSF052P17+ GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF017P23+ GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF032N08+ GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
rJMFF008F19+ GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
                      ____________________________________________________________
consensus GGTTCCAATACTTTCTTCTTCTTCTTCCCTAACTAATTTTCATTGCTTAACTAGTTTGTT
 
. : . : . : . : . : . :
rJMSF052P17+ GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF017P23+ GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF032N08+ GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF008F19+ GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
rJMFF048I16+ GAGTCTGTTTA
                      ____________________________________________________________
consensus GCTGTTTCTTGGAATTTTCTTGATTTTCTGCTGAAGCATTGCTGTAATGGAGTCTGTTTA
 
. : . : . : . : . : . :
rJMSF052P17+ TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF017P23+ TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF032N08+ TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF008F19+ TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
rJMFF048I16+ TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
                      ____________________________________________________________
consensus TGTTAATGGTCTCCTGAAGCCTGTGTACCTTTAGATTCATCGGACATTCCTTCAAGAACA
 
. : . : . : . : . : . :
rJMSF052P17+ TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCAT
rJMFF017P23+ TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC
rJMFF032N08+ TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC
rJMFF008F19+ TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACC
rJMFF048I16+ TTTTATTTTAGGGAATTACAAAAAGCGCATCCTACATCTTATTTTACCGGTGCAACCATA
                      ____________________________________________________________
consensus TCTTATCTTAGGGAATTACAAAAAGCACATCCTACATCATATTTTACCGGTGCAACCATA
 
. : . : . : . : . : . :
rJMFF048I16+ AACAAATGGTTTTTAAATAAAAAAAAAAAGAAAAAAAAAAAAAANCTCTCCAGGTGGATG
                      ____________________________________________________________
consensus AACAAATGGTTTTTAAATAAAAAAAAAAAGAAAAAAAAAAAAAANCTCTCCAGGTGGATG