Contig 004128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B06Sequence561010195 (6)ref|XP_006345083.1|1e-34PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos818004128 (5)ref|XP_009596648.1|9e-99PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif
JMFF045P02Sequence449010195 (6)525004128 (5)ref|XP_006345081.1|1e-08PREDICTED: serine protease SPPA, chloroplastic-like isoform X1 [Solanum tuberos
JMSF004I19Sequence320010195 (6)332004128 (5)ref|XP_009596646.1|8e-11PREDICTED: serine protease SPPA, chloroplastic isoform X1 [Nicotiana tomentosif
JMSF051I01Sequence673010195 (6)ref|XP_006345083.1|3e-55PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos726004128 (5)ref|XP_009596648.1|9e-113PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif
JMSF051K07Sequence700010195 (6)ref|XP_006345083.1|8e-69PREDICTED: serine protease SPPA, chloroplastic-like isoform X3 [Solanum tuberos758004128 (5)ref|XP_009596648.1|3e-94PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051I01+ TGGCAGAAACCNTACATTGACTGGTTCAAT
                      ____________________________________________________________
consensus TGGCAGAAACCNTACATTGACTGGTTCAAT
 
. : . : . : . : . : . :
rJMSF051I01+ TGGAGTTGTGACAGGGAAGTTTAATCTTGGGAATTTATATGAAAAGATTGGCTTCAACAA
rJMSF051K07+ CAA
rJMFF016B06+ CAA
                      ____________________________________________________________
consensus TGGAGTTGTGACAGGGAAGTTTAATCTTGGGAATTTATATGAAAAGATTGGCTTCAACAA
 
. : . : . : . : . : . :
rJMSF051I01+ GGAGATAATATCAAGGGGTAGATTTGCAGAGCTTACTGCTGCTGACCAGCGATCATTCAG
rJMSF051K07+ GGAGATAATATCAAGGGGTAGATTTGCAGAGCTTACTGCTGCTGACCAGCGATCATTCAG
rJMFF016B06+ GGAGATAATATCAAGGGGTAGATTTGCAGAGCTTACTGCTGCTGACCAGCGATCATTCAG
                      ____________________________________________________________
consensus GGAGATAATATCAAGGGGTAGATTTGCAGAGCTTACTGCTGCTGACCAGCGATCATTCAG
 
. : . : . : . : . : . :
rJMSF051I01+ GCCTGATGAAGCAGAATTATTTGAGAAATCTGCACAGAACGCATACAAACAATTCCGAGA
rJMSF051K07+ GCCTGATGAAGCAGAATTATTTGAGAAATCTGCACAGAACGCATACAAACAATTCCGAGA
rJMFF016B06+ GCCTGATGAAGCAGAATTATTTGAGAAATCTGCACAGAACGCATACAAACAATTCCGAGA
                      ____________________________________________________________
consensus GCCTGATGAAGCAGAATTATTTGAGAAATCTGCACAGAACGCATACAAACAATTCCGAGA
 
. : . : . : . : . : . :
rJMSF051I01+ TAAGGCAGCATTTTCAAGATCAATGAGTGTAGACAAAATGGAAGAGGTTGCACAAGGGAG
rJMSF051K07+ TAAGGCAGCATTTTCAAGATCAATGAGTGTAGACAAAATGGAAGAGGTTGCACAAGGGAG
rJMFF016B06+ TAAGGCAGCATTTTCAAGATCAATGAGTGTAGACAAAATGGAAGAGGTTGCACAAGGGAG
                      ____________________________________________________________
consensus TAAGGCAGCATTTTCAAGATCAATGAGTGTAGACAAAATGGAAGAGGTTGCACAAGGGAG
 
. : . : . : . : . : . :
rJMSF051I01+ GGTTTGGACCGGCAATGATGCTGCTTCACGAGGCCTTGTTGACGCAATTGGTGGTATTTC
rJMSF051K07+ GGTTTGGACCGGCAATGATGCTGCTTCACGAGGCCTTGTTGACGCAATTGGTGGTATTTC
rJMFF016B06+ GGTTTGGACCGGCAATGATGCTGCTTCACGAGGCCTTGTTGACGCAATTGGTGGTATTTC
                      ____________________________________________________________
consensus GGTTTGGACCGGCAATGATGCTGCTTCACGAGGCCTTGTTGACGCAATTGGTGGTATTTC
 
. : . : . : . : . : . :
rJMSF051I01+ TCGTGCTGTCGCAATAGCAAAACAAAAGGCCAACATACCTCAGGAAAGACAGGTTGATGT
rJMSF051K07+ TCGTGCTGTCGCAATAGCAAAACAAAAGGCCAACATACCTCAGGAAAGACAGGTTGATGT
rJMFF016B06+ TCGTGCTGTCGCAATAGCAAAACAAAAGGCCAACATACCTCAGGAAAGACAGGTTGATGT
                      ____________________________________________________________
consensus TCGTGCTGTCGCAATAGCAAAACAAAAGGCCAACATACCTCAGGAAAGACAGGTTGATGT
 
. : . : . : . : . : . :
rJMSF051I01+ TGTTGAGATGTCAAAGCCTTCCCCGACGTTGCCAGAAATATTGAGCGGTGTAGGGAGCAG
rJMSF051K07+ TGTTGAGATGTCAAAGCCTTCCCCGACGTTGCCAGAAATATTGAGCGGTGTAGGGAGCAG
rJMFF016B06+ TGTTGAGATGTCAAAGCCTTCCCCGACGTTGCCAGAAATATTGAGCGGTGTAGGGAGCAG
                      ____________________________________________________________
consensus TGTTGAGATGTCAAAGCCTTCCCCGACGTTGCCAGAAATATTGAGCGGTGTAGGGAGCAG
 
. : . : . : . : . : . :
rJMSF051I01+ TTTAGCTGGAGCTGACAGAAGTTTGAAAGAATTGTTAAATGAGTTGGCATCTAGTGATGG
rJMSF004I19+ GGAGCTGACAGAAGTNCGAAAGAATTGTTAAANGAGTTGGCATCTAGTGATGG
rJMSF051K07+ TTTAGCTGGAGCTGACAGAAGTTTGAAAGAATTGTTAAATGAGTTGGCATCTAGTGATGG
rJMFF016B06+ TTTAGCTGGAGCTGACAGAAGTTTGAAAGAATTGTTAAATGAGTTGGCATCTAGTGATGG
rJMFF045P02+ TTAGCAGGAGTTGACAGAAGTTTGAAAGAATCGTTAAATGAGTTGGCATCTAGTGATGG
                      ____________________________________________________________
consensus TTTAGCTGGAGCTGACAGAAGTTTGAAAGAATTGTTAAATGAGTTGGCATCTAGTGATGG
 
. : . : . : . : . : . :
rJMSF051I01+ AATCCAAGCTCGAATGGACGGAATCATGTTTGAGAAGTTGGAAGGAGCTGCTGCTCATGG
rJMSF004I19+ AATCCAAGCTCGAATGGACGGAATCATGTTTGAGAAGTTGGAAGGAGCTGCTGCTCATGG
rJMSF051K07+ AATCCAAGCTCGAATGGACGGAATCATGTTTGAGAAGTTGGAAGGAGCTGCTGCTCATGG
rJMFF016B06+ AATCCAAGCTCGAATGGACGGAATCATGTTTGAGAAGTTGGAAGGAGCTGCTGCTCATGG
rJMFF045P02+ AATGCAAGCTCGAATGAAGGGAATCATGTCTGAGAAGTGGGAAGGAGCTGATGCTCATGG
                      ____________________________________________________________
consensus AATCCAAGCTCGAATGGACGGAATCATGTTTGAGAAGTTGGAAGGAGCTGCTGCTCATGG
 
. : . : . : . : . : . :
rJMSF051I01+ AAACCCCTTACTCATGTTGATAAAAGATTGCCTCAGTTCCCTATAAATTTCAATTAGCCT
rJMSF004I19+ AAACCCCTTACTCATGTTGATAAAAGATTGCCTCAGTTCCCTATAAATTTCAATTAGCCT
rJMSF051K07+ AAACCCCTTACTCATGTTGATAAAAGATTGCCTCAGTTCCCTATAAATTTCAATTAGCCT
rJMFF016B06+ AAACCCCTTACTCATGTTGATAAAAGATTGCCTCAGTTACCTATAAATTTCAATTAGCCT
rJMFF045P02+ AACCCCCTTAGTCATGTTGATAAAAGATAGCCTCAGTTTCATATAAATTTCAATTAGCCT
                      ____________________________________________________________
consensus AAACCCCTTACTCATGTTGATAAAAGATTGCCTCAGTTCCCTATAAATTTCAATTAGCCT
 
. : . : . : . : . : . :
rJMSF051I01+ CTCATTTCACCTTCATTACGATTTGACCATTCTTTACTACTCCGTATAAAGTTTCTTATA
rJMSF004I19+ CTCATNTCACCTTCATTACGATTTGACCATTCTTTACTACTCCGTATAAAGTTTCTTATA
rJMSF051K07+ CTCATTTCACCTTCATTACGATTTGACCATTCTTTACTACTCCGTATAAAGTTTCTTATA
rJMFF016B06+ CTCATTTCACCTTCATTACGATTTGACCATTCTTTACTACTCCGTATAAAGTTTCTTATA
rJMFF045P02+ CTCATTTCACGTTCAATTCGATCCGACCATTCTTTATTGGGGGGTATAAAGTTTCTTATA
                      ____________________________________________________________
consensus CTCATTTCACCTTCATTACGATTTGACCATTCTTTACTACTCCGTATAAAGTTTCTTATA
 
. : . : . : . : . : . :
rJMSF051I01+ CAGTAAAGCAGCATTTCCACGGCCTTTATCTAATGC
rJMSF004I19+ CAGTAAAGCAGCATTTCCACGGCCTTTATCTAATGCTGGCCGCNGGATAGTCAAATTAAG
rJMSF051K07+ CAGTAAAGCAGCATTTCCACGGCCTTTATCTAATGCTGGCCGCTGGATAGTCAAATTAAG
rJMFF016B06+ CAGTAAAGCAGCATTTCCACGGCCTTTATCTAATGCTGGCCGCTGGATAGTCAAATTAAG
rJMFF045P02+ CAGTAAAGCAGCATTTCCACGGCCGGAATTTAATGCGGGCCGCTGGATAGTCAAATTAAG
                      ____________________________________________________________
consensus CAGTAAAGCAGCATTTCCACGGCCTTTATCTAATGCTGGCCGCTGGATAGTCAAATTAAG
 
. : . : . : . : . : . :
rJMSF004I19+ GGAAAATTGTATTTATCATCCTNAAGNTATAGGGTAATT
rJMSF051K07+ GGAAAATTGTATTTATCATCCTTAAGTTATAGGGTAATTGTAGAATTTGTTCTTATTGTT
rJMFF016B06+ GGAAAATTGTATTTATCATCCTTAAGTTATAGGGTAATTGTAGAATTTGTTCTTATTGTT
rJMFF045P02+ GGAAAATGGTCTTAATCATCCTCAAGTTATAGGGTAATTGTAGAATTTGTTTTTATTGTT
                      ____________________________________________________________
consensus GGAAAATTGTATTTATCATCCTTAAGTTATAGGGTAATTGTAGAATTTGTTCTTATTGTT
 
. : . : . : . : . : . :
rJMSF051K07+ GGTTATGCTCACT
rJMFF016B06+ GGTTATGCTCACTTTTCATTCTTAAGATATCTTTAGCATTGTACT
rJMFF045P02+ GGTTATGCTCACTTTTCATTCGTAAGATATGGTCAGCATTGTACTCAGTGTCCAAATATT
                      ____________________________________________________________
consensus GGTTATGCTCACTTTTCATTCTTAAGATATGTTTAGCATTGTACTCAGTGTCCAAATATT
 
. : . : . : . : . : . :
rJMFF045P02+ AAATTTTTAGCGTCGACTTTTTGTTCATAAGCTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus AAATTTTTAGCGTCGACTTTTTGTTCATAAGCTAAAAAAAAAAAAAAAACTCTCCAGGGT