| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016M16 | Sequence | 587 | 005170 (3) | emb|CDP09803.1| | 2e-56 | unnamed protein product [Coffea canephora] | 765 | 004119 (3) | ref|XP_009782605.1| | 2e-67 | PREDICTED: uncharacterized protein LOC104231332 isoform X2 [Nicotiana sylvestri |
| JMFF045A24 | Sequence | 646 | 005170 (3) | emb|CDP09803.1| | 8e-62 | unnamed protein product [Coffea canephora] | 644 | 004119 (3) | ref|XP_011072184.1| | 173 | PREDICTED: uncharacterized protein LOC105157473 [Sesamum indicum] |
| JMSF031P06 | Sequence | 654 | 005170 (3) | emb|CDP09803.1| | 5e-62 | unnamed protein product [Coffea canephora] | 721 | 004119 (3) | ref|XP_009782605.1| | 2e-97 | PREDICTED: uncharacterized protein LOC104231332 isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF031P06+ CTTGACAATATACAGCACAATGGAGCTGATTACCCCACT
____________________________________________________________
consensus CTTGACAATATACAGCACAATGGAGCTGATTACCCCACT
. : . : . : . : . : . :
rJMSF031P06+ GATGAGTGGGGTGGCATCTCATCTGAGGAACATGATGAAGCTGTCATGCTTGAGGCTGCA
____________________________________________________________
consensus GATGAGTGGGGTGGCATCTCATCTGAGGAACATGATGAAGCTGTCATGCTTGAGGCTGCA
. : . : . : . : . : . :
rJMSF031P06+ ATGTTTGGCGGTATACCTGAAGGGAGTGGGTTTCGTCTACCACATGTGGCACATCAGTTT
rJMFF016M16+ TACCACATGTGGCACATCAGTTT
____________________________________________________________
consensus ATGTTTGGCGGTATACCTGAAGGGAGTGGGTTTCGTCTACCACATGTGGCACATCAGTTT
. : . : . : . : . : . :
rJMSF031P06+ ATGCAGAACGGTTCAGATAGATCTGTGGGGCCTTATCCTTGGCAAATGCCTCGTCCACCA
rJMFF016M16+ ATGCAGAACGGTTCAGATAGATCTGTGGGGCCTTATCCTTGGCAAATGCCTCGTCCACCA
____________________________________________________________
consensus ATGCAGAACGGTTCAGATAGATCTGTGGGGCCTTATCCTTGGCAAATGCCTCGTCCACCA
. : . : . : . : . : . :
rJMSF031P06+ TCTCCATCTCTTGTGGCTCAGCGTTTATTACGAGAACAGCAGGATGATGAATACCTTGCT
rJMFF016M16+ TCTCCATCTCTTGTGGCTCAGCGTTTATTACGAGAACAGCAGGATGATGAATACCTTGCT
____________________________________________________________
consensus TCTCCATCTCTTGTGGCTCAGCGTTTATTACGAGAACAGCAGGATGATGAATACCTTGCT
. : . : . : . : . : . :
rJMSF031P06+ TCGCTGCAAGCTGATAGAGAAAAGGAATTGAAGGCAAAGCAAGAAGCTGAAGCTGCTCTT
rJMFF016M16+ TCGCTGCAAGCTGATAGAGAAAAGGAATTGAAGGCAAAGCAAGAAGCTGAAGCTGCTCTT
rJMFF045A24+ GAGAAAAGGAATTGAAGGCAAAGCAAGAAGCTGAAGCTGCTCTT
____________________________________________________________
consensus TCGCTGCAAGCTGATAGAGAAAAGGAATTGAAGGCAAAGCAAGAAGCTGAAGCTGCTCTT
. : . : . : . : . : . :
rJMSF031P06+ GTGGAAGAGAGGCGTAAGGAGGAGGAATTACTAAAGAAACTGGAGGAGGAGCAGGAAGCT
rJMFF016M16+ GTGGAAGAGAGGCGTAAGGAGGAGGAATTACTAAAGAAACTGGAGGAGGAGCAGGAAGCT
rJMFF045A24+ GTGGAAGAGAGGCGTAAGGAGGAGGAATTACTAAAGAAACTGGAGGAGGAGCAGGAAGCT
____________________________________________________________
consensus GTGGAAGAGAGGCGTAAGGAGGAGGAATTACTAAAGAAACTGGAGGAGGAGCAGGAAGCT
. : . : . : . : . : . :
rJMSF031P06+ GAGAGACAATTAGCAGCCAAAGAAGGTTCCTTGCCTCAGGAGCCAACCCCTGATGATGAG
rJMFF016M16+ GAGAGACAATTAGCAGCCAAAGAAGGTTCCTTGCCTCAGGAGCCAACCCCTGATGATGAG
rJMFF045A24+ GAGAGACAATTAGCAGCCAAAGAAGGTTCCTTGCCTCAGGAGCCAACCCCTGATGATGAG
____________________________________________________________
consensus GAGAGACAATTAGCAGCCAAAGAAGGTTCCTTGCCTCAGGAGCCAACCCCTGATGATGAG
. : . : . : . : . : . :
rJMSF031P06+ AATGCTGTTAACCTTGTTGTAAGGATGCCTGATGGCAGCCGGAGAGGTCGGCGATTTCTT
rJMFF016M16+ AATGCTGTTAACCTTGTTGTAAGGATGCCTGATGGCAGCCGGAGAGGTCGGCGATTTCTT
rJMFF045A24+ AATGCTGTTAACCTTGTTGTAAGGATGCCTGATGGCAGCCGGAGAGGTCGGCGATTTCTT
____________________________________________________________
consensus AATGCTGTTAACCTTGTTGTAAGGATGCCTGATGGCAGCCGGAGAGGTCGGCGATTTCTT
. : . : . : . : . : . :
rJMSF031P06+ AACTCTGATAGACTGCAGTGTCTTTTTGATTTCATTGATGTGGGAAGGGTGGTGAAGCCT
rJMFF016M16+ AACTCTGATAGACTGCAGTGTCTTTTTGATTTCATTGATGTGGGAAGGGTGGTGAAGCCT
rJMFF045A24+ AACTCTGATAGACTGCAGTGTCTTTTTGATTTCATTGATGTGGGAAGGGTGGTGAAGCCT
____________________________________________________________
consensus AACTCTGATAGACTGCAGTGTCTTTTTGATTTCATTGATGTGGGAAGGGTGGTGAAGCCT
. : . : . : . : . : . :
rJMSF031P06+ GGCACCTACAGATTGGTGAGACCATACCCCAGGCGTGCTTTTAGCAGCGGAGAGACTTCC
rJMFF016M16+ GGCACCTACAGATTGGTGAGACCATACCCCAGGCGTGCTTTTAGCAGCGGAGAGACTTCC
rJMFF045A24+ GGCACCTACAGATTGGTGAGACCATACCCCAGGCGTGCTTTTAGCAGCGGAGAGACTTCC
____________________________________________________________
consensus GGCACCTACAGATTGGTGAGACCATACCCCAGGCGTGCTTTTAGCAGCGGAGAGACTTCC
. : . : . : . : . : . :
rJMSF031P06+ TCAACTCTGAATGAACTAGGCTTGACGAGCAAACAGGAAGCATTGTTTCTGGAGCTGATA
rJMFF016M16+ TCAACTCTGAATGAACTAGGCTTGACGAGCAAACAGGAAGCATTGTTTCTGGAGCTGATA
rJMFF045A24+ TCAACTCTGAATGAACTAGGCTTGACGAGCAAACAGGAAGCATTGTTTCTGGAGCTGATA
____________________________________________________________
consensus TCAACTCTGAATGAACTAGGCTTGACGAGCAAACAGGAAGCATTGTTTCTGGAGCTGATA
. : . : . : . : . : . :
rJMSF031P06+ TAGGTTGTAAAGTTCTTCAACA
rJMFF016M16+ TAGGTTGTAAAGTTCTTCAACATTGCATTTACAAGATTTAGTTTCAGTGGGTTAATATAT
rJMFF045A24+ TAGGTTGTAAAGTTCTTCAACATTGCATTTACAAGATTTAGTTTCAGTGGGTTAATATAT
____________________________________________________________
consensus TAGGTTGTAAAGTTCTTCAACATTGCATTTACAAGATTTAGTTTCAGTGGGTTAATATAT
. : . : . : . : . : . :
rJMFF016M16+ AGGAGGTTAAAAAAGATGGGGACTATATTGGTGGGTGAACATGGAGTGGGTGGCTGCTGG
rJMFF045A24+ AGGAGGTTAAAAAAGATGGGGACTATATTGGTGGGTGAACATGGAGTGGGTGGCTGCTGG
____________________________________________________________
consensus AGGAGGTTAAAAAAGATGGGGACTATATTGGTGGGTGAACATGGAGTGGGTGGCTGCTGG
. : . : . : . : . : . :
rJMFF016M16+ GTGCAGGTTGATGATAATGATGATTACAATGGATTGTTTTTGGTGCTTTGTGATAACTAT
rJMFF045A24+ GTGCAGGTTGATGATAATGATGATTACAATGGATTGTTTTTGGTGCTTTGTGATAACTAT
____________________________________________________________
consensus GTGCAGGTTGATGATAATGATGATTACAATGGATTGTTTTTGGTGCTTTGTGATAACTAT
. : . : . : . : . : . :
rJMFF016M16+ TCTTCTCCAAGTCAAAATCAAA
rJMFF045A24+ TCTTCTCCAAGTCAAAATCAAATCAAAAAAATTTATAAAAAAAAAAAAAAAACTCTCCAG
____________________________________________________________
consensus TCTTCTCCAAGTCAAAATCAAATCAAAAAAATTTATAAAAAAAAAAAAAAAACTCTCCAG