Contig 004107:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043I15Sequence646002240 (3)ref|XP_002514303.1|1e-74sugar transporter, putative [Ricinus communis] gb|EEF48257.1| sugar transporter,633004107 (4)ref|XP_009774532.1|4e-60PREDICTED: polyol transporter 5-like [Nicotiana sylvestris]
JMFF045D09Sequence635002240 (3)ref|XP_002514303.1|4e-57sugar transporter, putative [Ricinus communis] gb|EEF48257.1| sugar transporter,605004107 (4)gb|KDP33673.1|8e-37hypothetical protein JCGZ_07244 [Jatropha curcas]
JMSF024D22Sequence658002240 (3)755004107 (4)ref|XP_009774532.1|7e-118PREDICTED: polyol transporter 5-like [Nicotiana sylvestris]
JMSF039M08Sequence611012115 (4)ref|XP_006356478.1|2e-81PREDICTED: rhodanese-like domain-containing protein 7-like [Solanum tuberosum]847004107 (4)ref|XP_009774532.1|4e-107PREDICTED: polyol transporter 5-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF024D22+                                                    CNTCCGGCGAGTGGCGCG
                      ____________________________________________________________
consensus                                                       CNTCCGGCGAGTGGCGCG
 
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rJMSF024D22+          GACAAGGTGCATGGAGAGAGCTGCTCTGCCCGACGGCGCCGATCCGCCGCATGTTGGTTA
rJMSF039M08+                                                 CGATCCGCCGCATGTTGGTTA
                      ____________________________________________________________
consensus             GACAAGGTGCATGGAGAGAGCTGCTCTGCCCGACGGCGCCGATCCGCCGCATGTTGGTTA
 
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rJMSF024D22+          CGGCCATCGGAATAAACTTCTTCATGCAAGCCTCCGGGAACGACGCGGTGGTTTACTACA
rJMSF039M08+          CGGCCATCGGAATAAACTTCTTCATGCAAGCCTCCGGGAACGACGCGGTGGTTTACTACA
                      ____________________________________________________________
consensus             CGGCCATCGGAATAAACTTCTTCATGCAAGCCTCCGGGAACGACGCGGTGGTTTACTACA
 
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rJMSF024D22+          CGCCGTTGGTGTTCAAATCCGCCGGAATAACTAACCGGAAAGGCCAAATCGGAGTAACAA
rJMSF039M08+          CGCCGTTGGTGTTCAAATCCGCCGGAATAACTAACCGGAAAGGCCAAATCGGAGTAACAA
                      ____________________________________________________________
consensus             CGCCGTTGGTGTTCAAATCCGCCGGAATAACTAACCGGAAAGGCCAAATCGGAGTAACAA
 
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rJMSF024D22+          TCATCATGGGCATGGCTAAAACCACCTTTGTTTTGGTCTCAGCACTTTTCCTCGACAATT
rJMSF039M08+          TCATCATGGGCATGGCTAAAACCACCTTTGTTTTGGTCTCAGCACTTTTCCTCGACAATT
                      ____________________________________________________________
consensus             TCATCATGGGCATGGCTAAAACCACCTTTGTTTTGGTCTCAGCACTTTTCCTCGACAATT
 
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rJMSF024D22+          TCGGGAGACGGCCCATGTTACTATTGGGCACAGTGGGCCAGGCCCTATCCCTTGCTGGGC
rJMSF039M08+          TCGGGAGACGGCCCATGTTACTATTGGGCACAGTGGGCCAGGCCCTATCCCTTGCTGGGC
                      ____________________________________________________________
consensus             TCGGGAGACGGCCCATGTTACTATTGGGCACAGTGGGCCAGGCCCTATCCCTTGCTGGGC
 
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rJMSF024D22+          TCGGGCTGGGCTCAACATATCTCCTCCACGCCCATCACAAGCCCATTTGGGCCATCGCAT
rJMSF039M08+          TCGGGCTGGGCTCAACATATCTCCTCCACGCCCATCACAAGCCCATTTGGGCCATCGCAT
rJMFF045D09+                                                 AGCCCATTTGGGCCATCGCAT
rJMFF043I15+                                     ACGCCCATCACAAGCCCATTTGGGCCATCGCAT
                      ____________________________________________________________
consensus             TCGGGCTGGGCTCAACATATCTCCTCCACGCCCATCACAAGCCCATTTGGGCCATCGCAT
 
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rJMSF024D22+          TGTGTGTTCTCGCGGTTTGCGCCGACGTCTCGTTCTTCTCAATCGGGCTCGGGCCGGTCA
rJMSF039M08+          TGTGTGTTCTCGCGGTTTGCGCCGACGTCTCGTTCTTCTCAATCGGGCTCGGGCCGGTCA
rJMFF045D09+          GTGTTGTTCTCGCGGTTTGCGCCGACGTCTCGTTCTTCTCAATCGGGCTCGGGCCGGTCA
rJMFF043I15+          TGTGTGTTCTCGCGGTTTGCGCCGACGTCTCGTTCTTCTCAATCGGGCTCGGGCCGGTCA
                      ____________________________________________________________
consensus             TGTGTGTTCTCGCGGTTTGCGCCGACGTCTCGTTCTTCTCAATCGGGCTCGGGCCGGTCA
 
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rJMSF024D22+          CATGGGTCTACTCAGCTGAGATTTTCCCACTCAGACTCAGGGCCCAAGGCTCGGCCCTAG
rJMSF039M08+          CATGGGTCTACTCAGCTGAGATTTTCCCACTCAGACTCAGGGCCCAAGGCTCGGCCCTAG
rJMFF045D09+          CATGGGTCTACTCAGCTGAGATTTTCCCACTCAGACTCAGGGCCCAAGGCTCGGCCCTAG
rJMFF043I15+          CATGGGTCTACTCAGCTGAGATTTTCCCACTCAGACTCAGGGCCCAAGGCTCGGCCCTAG
                      ____________________________________________________________
consensus             CATGGGTCTACTCAGCTGAGATTTTCCCACTCAGACTCAGGGCCCAAGGCTCGGCCCTAG
 
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rJMSF024D22+          CAGTTTCAGTGAATAGGTTGGTGAGTGGAGTTGTCTCAGCCACATTTCTTAGTATTTCCC
rJMSF039M08+          CAGTTTCAGTGAATAGGTTGGTGAGTGGAGTTGTCTCAGCCACATTTCTTAGTATTTCCC
rJMFF045D09+          CAGTTTCAGTGAATAGGTTGGTGAGTGGAGTTGTCTCAGCCACATTTCTTAGTATTTCCC
rJMFF043I15+          CAGTTTCAGTGAATAGGTTGGTGAGTGGAGTTGTCTCAGCCACATTTCTTAGTATTTCCC
                      ____________________________________________________________
consensus             CAGTTTCAGTGAATAGGTTGGTGAGTGGAGTTGTCTCAGCCACATTTCTTAGTATTTCCC
 
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rJMSF024D22+          AAAAAATAACGTTTGGAGGAATGTTTTTTGTGCTTTCTGGGGTTATGGTGGTGGCTACAC
rJMSF039M08+          AAAAAATAACGTTTGGAGGAATGTTTTTTGTGCTTTCTGGGGTTATGGTGGTGGCTACAC
rJMFF045D09+          AAAAA--AACGTTTGGAGGAATGTTTTTTGTGCTTTCTGGGGTTATGGTGGTGGCTACAC
rJMFF043I15+          AAAAAATAACGTTTGGAGGAATGTTTTTTGTGCTTTCTGGGGTTATGGTGGTGGCTACAC
                      ____________________________________________________________
consensus             AAAAAATAACGTTTGGAGGAATGTTTTTTGTGCTTTCTGGGGTTATGGTGGTGGCTACAC
 
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rJMSF024D22+          TATTCTTTTACTTGCTATTGCCAGAGACCAAAGGCATGAGCCTAGAGGAAATAGGGTCAC
rJMSF039M08+          TATTCTTTTACTTGCTATTGCCAGAGACCAAAGGCATGAGCCTAGAGGAAATAGGGTCAC
rJMFF045D09+          TATTCTTTTACTTGCTATTGCCAGAGACCAAAGGCATGAGCCTAGAGGAAATAGGGTCAC
rJMFF043I15+          TATTCTTTTACTTGCTATTGCCAGAGACCAAAGGCATGAGCCTAGAGGAAATAGGGTCAC
                      ____________________________________________________________
consensus             TATTCTTTTACTTGCTATTGCCAGAGACCAAAGGCATGAGCCTAGAGGAAATAGGGTCAC
 
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rJMSF024D22+          TATTTGAGGACAAACAAGATAATGGTGAAAAGGATAAAGATATTGAATTGGAGAGATAGA
rJMSF039M08+          TATTTGAGGACAAACAAGATAATGGTGAAAAGGATAAAGATATTGAATTGGAGAGATAGA
rJMFF045D09+          TATTTGAGGACAAACAAGATAATGGTGAAAAGGATAAAGATATTGAATTGGAGAGATAGA
rJMFF043I15+          TATTTGAGGACAAACAAGATAATGGTGAAAAGGATAAAGATATTGAATTGGAGAGATAGA
                      ____________________________________________________________
consensus             TATTTGAGGACAAACAAGATAATGGTGAAAAGGATAAAGATATTGAATTGGAGAGATAGA
 
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rJMSF024D22+          TAGGGCATGGAGCAATT                                           
rJMSF039M08+          TAGGGCATGGAGCAATTTCTTGTATGGTTTTATTAGTTATATATAGTGTGCTAATCCATA
rJMFF045D09+          TAGGGCATGGAGCAATTTCTTGTATGGTTTTATTAGTTATATATAGTGTGCTAATCCATA
rJMFF043I15+          TAGGGCATGGAGCAATTTCTTGTATGGTTTTATTAGTTATATATAGTGTGCTAATCCATA
                      ____________________________________________________________
consensus             TAGGGCATGGAGCAATTTCTTGTATGGTTTTATTAGTTATATATAGTGTGCTAATCCATA
 
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rJMSF039M08+          ATATTTAGGAGTTTGATGTGATTATTTAGTATATTTAATTAAGAATATTTGTGTTTCATT
rJMFF045D09+          ATATTTAGGAGTTTGATGTGATTATTTAGTATATTTAATTAAGAATATTTGTGTTTCATT
rJMFF043I15+          ATATTTAGGAGTTTGATGTGATTATTTAGTATATTTAATTAAGAATATTTGTGTTTCATT
                      ____________________________________________________________
consensus             ATATTTAGGAGTTTGATGTGATTATTTAGTATATTTAATTAAGAATATTTGTGTTTCATT
 
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rJMSF039M08+          ATGTAATTGAGTGAGTTAGTGGCATAAGCCACCTGTATTGTAATGA              
rJMFF045D09+          ATGTAATTGAGTGAGTTAGTGGCATAAGCCACCTGTATTGTAATGATTATTTCAAACATA
rJMFF043I15+          ATGTAATTGAGTGAGTTAGTGGCATAAGCCACCTGTATTGTAATGATTATTTCAAACATA
                      ____________________________________________________________
consensus             ATGTAATTGAGTGAGTTAGTGGCATAAGCCACCTGTATTGTAATGATTATTTCAAACATA
 
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rJMFF045D09+          ATGAAAAACGTAATGATGCGTGTTAGTTGTCAAAAAAAAAAAAAA               
rJMFF043I15+          ATGAAAAACGTAATGATGCGTGTTAGTTGTCTCGAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             ATGAAAAACGTAATGATGCGTGTTAGTTGTCTCGAAAAAAAAAAAAAAACTCTCCAGGGT