Contig 004105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001P14Sequence611008710 (4)gb|EYU37517.1|2e-07hypothetical protein MIMGU_mgv11b017514mg [Erythranthe guttata]622004105 (2)ref|XP_006361242.1|1e-38PREDICTED: cyclin-dependent kinase F-4-like isoform X1 [Solanum tuberosum]
JMFF043G04Sequence618008710 (4)gb|EYU37517.1|3e-07hypothetical protein MIMGU_mgv11b017514mg [Erythranthe guttata]598004105 (2)ref|XP_006361244.1|4e-28PREDICTED: cyclin-dependent kinase F-4-like isoform X3 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF001P14+ TAAAGGC
                      ____________________________________________________________
consensus TAAAGGC
 
. : . : . : . : . : . :
rJMFF001P14+ AATAGGTGGTCCTCAGGTGCTCTCTCCCACCCAAAGCCCACTAGTAACTTCTCTCCTGCC
                      ____________________________________________________________
consensus AATAGGTGGTCCTCAGGTGCTCTCTCCCACCCAAAGCCCACTAGTAACTTCTCTCCTGCC
 
. : . : . : . : . : . :
rJMFF001P14+ AAGTCCCATGTGTCCTTGAATACTGCGGGTGTGCAAAGAAGGTTGGATATGAACTACCAA
rJMFF043G04+ GTCCCATGTGTCCTTGAATACTGCGGGTGTGCAAAGAAGGTTGGATATGAACTACCAA
                      ____________________________________________________________
consensus AAGTCCCATGTGTCCTTGAATACTGCGGGTGTGCAAAGAAGGTTGGATATGAACTACCAA
 
. : . : . : . : . : . :
rJMFF001P14+ CAGGATGCGATGAAGAATGATAAACCTGTTAAGGCTTCGATAAAGCAACAACTGAAAAAC
rJMFF043G04+ CAGGATGCGATGAAGAATGATAAACCTGTTAAGGCTTCGATAAAGCAACAACTGAAAAAC
                      ____________________________________________________________
consensus CAGGATGCGATGAAGAATGATAAACCTGTTAAGGCTTCGATAAAGCAACAACTGAAAAAC
 
. : . : . : . : . : . :
rJMFF001P14+ CGGGCTTTAGCAAGGGACAACCAACGTGCAAGTGAAAAACCTAGTGTAGTCTCTGGTGCA
rJMFF043G04+ CGGGCTTTAGCAAGGGACAACCAACGTGCAAGTGAAAAACCTAGTGTAGTCTCTGGTGCA
                      ____________________________________________________________
consensus CGGGCTTTAGCAAGGGACAACCAACGTGCAAGTGAAAAACCTAGTGTAGTCTCTGGTGCA
 
. : . : . : . : . : . :
rJMFF001P14+ ACAGAAAAGCTAGCCAACATGACAATTGGGTCTACTAGAAGAGTAGCCACAAAACCTGTG
rJMFF043G04+ ACAGAAAAGCTAGCCAACATGACAATTGGGTCTACTAGAAGAGTAGCCACAAAACCTGTG
                      ____________________________________________________________
consensus ACAGAAAAGCTAGCCAACATGACAATTGGGTCTACTAGAAGAGTAGCCACAAAACCTGTG
 
. : . : . : . : . : . :
rJMFF001P14+ CCTCAACCTATGAAGGCTGGAGGATGGCACGCACAACCTGATGCGTTTCTTGTGAAATCT
rJMFF043G04+ CCTCAACCTATGAAGGCTGGAGGATGGCACGCACAACCTGATGCGTTTCTTGTGAAATCT
                      ____________________________________________________________
consensus CCTCAACCTATGAAGGCTGGAGGATGGCACGCACAACCTGATGCGTTTCTTGTGAAATCT
 
. : . : . : . : . : . :
rJMFF001P14+ CAGGATATTCTTCCCGGAAGAAGTTACACAAGGAAAGTGGCGGGATGAACCAATTTCTTG
rJMFF043G04+ CAGGATATTCTTCCCGGAAGAAGTTACACAAGGAAAGTGGCGGGATGAACCAATTTCTTG
                      ____________________________________________________________
consensus CAGGATATTCTTCCCGGAAGAAGTTACACAAGGAAAGTGGCGGGATGAACCAATTTCTTG
 
. : . : . : . : . : . :
rJMFF001P14+ CTCTGTTGCTTTTATAGTGTGTGCTATTGCTGGTCCTTTTTTCTGTGGCTAAAATATGTT
rJMFF043G04+ CTCTGTTGCTTTTATAGTGTGTGCTATTGCTGGTCCTTTTTTCTGTGGCTAAAATATGTT
                      ____________________________________________________________
consensus CTCTGTTGCTTTTATAGTGTGTGCTATTGCTGGTCCTTTTTTCTGTGGCTAAAATATGTT
 
. : . : . : . : . : . :
rJMFF001P14+ TTGTTGAGTGGGTGATCCCAGCCACTTCTATGGTATCTTTCGTTTTGTTTCGTTTTATTG
rJMFF043G04+ TTGTTGAGTGGGTGATCCCAGCCACTTCTATGGTATCTTTCGTTTTGTTTCGTTTTATTG
                      ____________________________________________________________
consensus TTGTTGAGTGGGTGATCCCAGCCACTTCTATGGTATCTTTCGTTTTGTTTCGTTTTATTG
 
. : . : . : . : . : . :
rJMFF001P14+ ACATTACTTGTCTCAAACGCAAGTTTCTCGTGTGTGTGTGTGTTTTTTTCCCGTTTCGAC
rJMFF043G04+ ACATTACTTGTCTCAAACGCAAGTTTCTCGTGTGTGTGTGTGTTTTTTTCCCGTTTCGAC
                      ____________________________________________________________
consensus ACATTACTTGTCTCAAACGCAAGTTTCTCGTGTGTGTGTGTGTTTTTTTCCCGTTTCGAC
 
. : . : . : . : . : . :
rJMFF001P14+ TTGGTTAATAAAATA
rJMFF043G04+ TTGGTTAATAAAATACTGGTTTGTGTTTTTGATAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TTGGTTAATAAAATACTGGTTTGTGTTTTTGATAAAAAAAAAAAAAAAACTCTCCAGGGT