Contig 004104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M05Sequence563004104 (7)ref|XP_004251104.1|4e-26PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4 isof747004104 (7)ref|XP_009629475.1|6e-71PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4 [Nic
JMFF042O09Sequence667004104 (7)ref|XP_009629475.1|2e-63PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4 [Nic454004104 (7)
JMSF007I08Sequence290020982714004104 (7)ref|XP_009801235.1|2e-21PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like
JMSF010E07Sequence287004104 (7)
JMSF027M13Sequence349004104 (7)ref|XP_009801235.1|2e-04PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016M05- GCAATCGCACAATCCCCCGGTGAACGTCGGACCTCAGGCGACA
                      ____________________________________________________________
consensus GCAATCGCACAATCCCCCGGTGAACGTCGGACCTCAGGCGACA
 
. : . : . : . : . : . :
JMFF016M05- GGTAAACCTCACCAGACACTAATCAAATTCCAGCTTCGACGCTTTACCCATTGTAGACTC
                      ____________________________________________________________
consensus GGTAAACCTCACCAGACACTAATCAAATTCCAGCTTCGACGCTTTACCCATTGTAGACTC
 
. : . : . : . : . : . :
JMFF016M05- GTAGTAGACATTCAAGTTTTTCAGTAACCGACATAATCGACCGAAACCAATGGTCCGCTA
                      ____________________________________________________________
consensus GTAGTAGACATTCAAGTTTTTCAGTAACCGACATAATCGACCGAAACCAATGGTCCGCTA
 
. : . : . : . : . : . :
JMSF010E07- AACTCTTCAGCATTGGCAGCTAAGCT
JMFF016M05- TATCATTTACTTTGGTCGGTTATGAAGGTTCAAAAACTCTTCAGCATTGGCGGCTAAGCT
JMFF042O09- AACTCTTCAGCATTGGCGGCTAAGCT
                      ____________________________________________________________
consensus TATCATTTACTTTGGTCGGTTATGAAGGTTCAAAAACTCTTCAGCATTGGCGGCTAAGCT
 
. : . : . : . : . : . :
JMSF010E07- ATCGTCACTTTTACTCCGAAGAATTTCACCTTTGAATCGAAACTGTTTCT---------G
JMFF016M05- ATCGTCACTTTTACTCTGAAGAATCTCACCTTTGAATCGAAACTGTTTCTGCCGCCGGAG
JMFF042O09- ATCGTCACTTTTACTCTGAAGAATCTCACCTTTGAATCGAAACTGTTTCTGCCGCCGGAG
rJMFF016M05+ G
                      ____________________________________________________________
consensus ATCGTCACTTTTACTCTGAAGAATCTCACCTTTGAATCGAAACTGTTTCTGCCGCCGGAG
 
. : . : . : . : . : . :
JMSF010E07- CCGCCATGAGTTCCGACCCTGAAAATGATCCCCAAAACGCGTCGTCCTCGAGCTCCCAAG
JMFF016M05- CCGCCATGAGTGCCGACAGTGAAAATGGTCCCCAAAATGTGTCGTCCTCGAGCTCCCAAG
JMFF042O09- CCGCCATGAGTGCCGACAGTGAAAATGGTCCCCAAAATGTGTCGTCCTCGAGCTCCCAAG
rJMFF016M05+ CCGCCATGAGTGCCGACAGTGAAAATGGTCCCCAAAATGTGTCGTCCTCGAGCTCCCAAG
                      ____________________________________________________________
consensus CCGCCATGAGTGCCGACAGTGAAAATGGTCCCCAAAATGTGTCGTCCTCGAGCTCCCAAG
 
. : . : . : . : . : . :
JMSF010E07- AAGCCGATAAGCCACCGATCGAACCCATTCGCC
JMFF016M05- AAGCCGATAAGCCACCGATCGAACCCATTCGCCTCCCAACAGTCGAGGAAATTCGAGGCC
JMFF042O09- AAGCCGATAAGCCACCGATCGAACCCATTCGCCTCCCAACAGTCGAGGAAATTCGAGGCC
rJMFF016M05+ AAGCCGATAAGCCACCGATCGAACCCATTCGCCTCCCAACAGTCGAGGAAATTCGAGGCC
                      ____________________________________________________________
consensus AAGCCGATAAGCCACCGATCGAACCCATTCGCCTCCCAACAGTCGAGGAAATTCGAGGCC
 
. : . : . : . : . : . :
JMFF016M05- AGGACATTTGGAACAACTGCGCCGTTCGCAGCGTCTCCAGCGGCGTCATGGGAGGGGGAC
JMFF042O09- AGGACATTTGGAACAACTGCGCCGTTCGCAGCGTCTCCAGCGGCGTCATGGGAGGGGGAC
rJMFF016M05+ AGGACATTTGGAACAACTGCGCCGTTNCGAGCGTCTCCAGCGGCGTCATGGGAGGGGGAC
                      ____________________________________________________________
consensus AGGACATTTGGAACAACTGCGCCGTTCGCAGCGTCTCCAGCGGCGTCATGGGAGGGGGAC
 
. : . : . : . : . : . :
JMFF016M05- TAGGATTGTTCATGGGTCTGTTCTTAGGTGCACTGGACAATCCTATAATGCAAGATGAAA
JMFF042O09- TAGGATTGTTCATGGGTCTGTTCTTAGGTGCACTGGACAATCCTATAATGCAAGATGAAA
rJMFF016M05+ TAGGATTGTTCATGGGTCTGTTCTTAGGTGCACTGGACAATCCTATAATGCAAGATGAAA
                      ____________________________________________________________
consensus TAGGATTGTTCATGGGTCTGTTCTTAGGTGCACTGGACAATCCTATAATGCAAGATGAAA
 
. : . : . : . : . : . :
JMFF016M05- TGACTACCAGGCAACAAATTGTGTTCCAAGCAAAGCAGAT
JMFF042O09- TGACTACCAGGCAACAAATTGTGTTCCAAGCAAAGCAGATGGGTCGGAGGAGTTGGAGCT
rJMFF016M05+ TGACTACCAGGCAACAAATTGTGTTCCAAGCAAAGCAGATGGGTCGGAGGAGTTGGAGCT
                      ____________________________________________________________
consensus TGACTACCAGGCAACAAATTGTGTTCCAAGCAAAGCAGATGGGTCGGAGGAGTTGGAGCT
 
. : . : . : . : . : . :
JMFF042O09- CCTGCAAGACCTTTGCGGTTATGGGTTTCATTTTCTCAGCTGCTGAATGTGTTATTGAGA
rJMFF016M05+ CCTGCAAGACCTTTGCGGTTATGGGTTTCATTTTCTCAGCTGCTGAATGTGTTATTGAGA
rJMSF007I08+ GGTTTCATTTTCTCAGCTGCTGAATGTGNTATTGAGA
                      ____________________________________________________________
consensus CCTGCAAGACCTTTGCGGTTATGGGTTTCATTTTCTCAGCTGCTGAATGTGTTATTGAGA
 
. : . : . : . : . : . :
JMFF042O09- AGGCACGAGCGAAGCATGATACTACAAACACAGCAGTTGCTGGATGTGTAACAGGAGGCA
rJMFF016M05+ AGGCACGAGCGAAGCATGATACTACAAACACAGCAGTTGCTGGATGTGTAACAGGAGGCA
rJMSF027M13+ GTAACAGGAGGCA
rJMSF007I08+ AGGCACGAGCGAAGCATGATACTACAAACACAGCAGTTGCTGGATGTGTAACAGGAGGCA
                      ____________________________________________________________
consensus AGGCACGAGCGAAGCATGATACTACAAACACAGCAGTTGCTGGATGTGTAACAGGAGGCA
 
. : . : . : . : . : . :
JMFF042O09- CACTATCAGCCAGAGGAGGTCCAAAGGCCGCGTGTGCTGGTTGTGCTGGCTTTGCT
rJMFF016M05+ CACTATCAGCCAGAGGAGGTCCAAAGGCCGCGTGTGCTGGTTGTGCTGGCTTTGCTGCAT
rJMSF027M13+ CACTATCAGCCAGAGGAGGTCCAAAGGCCGCGTGTGCTGGTTGTGCTGGCTTTGCTGCAT
rJMSF007I08+ CACTATCAGCCAGAGGAGGTCCAAAGGCCGCGTGTGCTGGTTGTGCTGGCTTTGCTGCAT
                      ____________________________________________________________
consensus CACTATCAGCCAGAGGAGGTCCAAAGGCCGCGTGTGCTGGTTGTGCTGGCTTTGCTGCAT
 
. : . : . : . : . : . :
rJMFF016M05+ TCTCAGTCGTGATAGAGAAGTTCTTAGAAAGGTACCATTAACAAGTTGCAGATTCATACA
rJMSF027M13+ TCTCAGTCGTGATAGAGAAGTTCTTAGAAAGGTACCATTANCAAGTTGCAGATTCATACA
rJMSF007I08+ TCTCAGTCGTGATAGAGAAGTTCTTAGAAAGGTACCATTAACAAGTTGCAGATTCATACA
                      ____________________________________________________________
consensus TCTCAGTCGTGATAGAGAAGTTCTTAGAAAGGTACCATTAACAAGTTGCAGATTCATACA
 
. : . : . : . : . : . :
rJMFF016M05+ AGGACACAGAGAGTTGTAGCCAAGCGAGATATCGTGACTAGCATCATTCTTTTTGCCCCA
rJMSF027M13+ AGGACACAGAGAGTTGTAGCCAAGCGAGATATCGTGACTAGCATCATTCTTTTNGCCCCA
rJMSF007I08+ AGGACACAGAGAGTTGTAGCCAAGCGAGATATCGTGACTAGCATCATTCTTTTTGCCCCA
                      ____________________________________________________________
consensus AGGACACAGAGAGTTGTAGCCAAGCGAGATATCGTGACTAGCATCATTCTTTTTGCCCCA
 
. : . : . : . : . : . :
rJMFF016M05+ ACATTATCGTTGATTAATTTTTCTCTCCTTAGAAAAGGGACCTCATTGAAAGTGTTATGT
rJMSF027M13+ ACATTATCGTTGATTAATTTTTCTCTCCTTAGAAAAGGGACCTCATTGAAAGTGTTATGT
rJMSF007I08+ ACATTATCGTTGATTAATTTTTCTCTCCTTAGAAAAGGGACCTCATTGAAAGTGTTATGT
                      ____________________________________________________________
consensus ACATTATCGTTGATTAATTTTTCTCTCCTTAGAAAAGGGACCTCATTGAAAGTGTTATGT
 
. : . : . : . : . : . :
rJMFF016M05+ ACCTTAAAGATCTCGTTTTGACTCTACCATTAGCACAACTTCTCCCTGGTCTGGGGAAAG
rJMSF027M13+ ACCTTAAAGATCTCGTTTTGACTTTACCANTAGCACAACTTCTCCCTGGTCTGGGGAAAG
rJMSF007I08+ ACCTTAAAGATCTCGTTTTGACTCTACCATTAGCACAACTTCTCCCTGGTCTGGGGAAAG
                      ____________________________________________________________
consensus ACCTTAAAGATCTCGTTTTGACTCTACCATTAGCACAACTTCTCCCTGGTCTGGGGAAAG
 
. : . : . : . : . : . :
rJMFF016M05+ T
rJMSF027M13+ TTGAGGTGATCAAATAAAGCTTNGATAAACCAGTTT
rJMSF007I08+ TTGAGGTGATCAAATAAAGCTTTGATAAACCAGTTTGGTTGGCGTGAGTGGCTGTGCACT
rJMFF042O09+ CCAGTTTGGTTGGCGTGAGTGGCTGTGCACT
                      ____________________________________________________________
consensus TTGAGGTGATCAAATAAAGCTTTGATAAACCAGTTTGGTTGGCGTGAGTGGCTGTGCACT
 
. : . : . : . : . : . :
rJMSF007I08+ CTCGTCCCTTAAGAGAGGTCGGGAGTTCGAATTCCTTCTTGTATGAAAAAACCAATCTGG
rJMFF042O09+ CTCGTCCCTTAAGAGAGGTCGGGAGTTCGAATTCCTTCTTGTATGAAAAAACCAATCTGG
                      ____________________________________________________________
consensus CTCGTCCCTTAAGAGAGGTCGGGAGTTCGAATTCCTTCTTGTATGAAAAAACCAATCTGG
 
. : . : . : . : . : . :
rJMSF007I08+ CCAGCATTTTGCCCCTTAATTG
rJMFF042O09+ CCAGCATTTTGCCCCTTAATTGGGCCGGTCCGGTGCGACGGGGATTAGTCTGAATATGGT
                      ____________________________________________________________
consensus CCAGCATTTTGCCCCTTAATTGGGCCGGTCCGGTGCGACGGGGATTAGTCTGAATATGGT
 
. : . : . : . : . : . :
rJMFF042O09+ ACGGGCTTAAAGGTGCCTCTTACATTTAGGGTCCGCTCAGGATATCTCGTGAAAGCTTTG
                      ____________________________________________________________
consensus ACGGGCTTAAAGGTGCCTCTTACATTTAGGGTCCGCTCAGGATATCTCGTGAAAGCTTTG
 
. : . : . : . : . : . :
rJMFF042O09+ ATATCTTTACAAACGTTCATTAGGTATTACAAAAAAGTTGTATTCATGTCCCATTTCTTT
                      ____________________________________________________________
consensus ATATCTTTACAAACGTTCATTAGGTATTACAAAAAAGTTGTATTCATGTCCCATTTCTTT
 
. : . : . : . : . : . :
rJMFF042O09+ ACTCTTCTGCTGCAGTTGTTCCCATGAATATCTTCTTAGCTTAGCTTGTAATCTACTAGC
                      ____________________________________________________________
consensus ACTCTTCTGCTGCAGTTGTTCCCATGAATATCTTCTTAGCTTAGCTTGTAATCTACTAGC
 
. : . : . : . : . : . :
rJMFF042O09+ TATTTCATTTTTCGAGGGTACGAGTGTCTGCTTGGATTGCTATGAGCCTTATGGCGAAGT
                      ____________________________________________________________
consensus TATTTCATTTTTCGAGGGTACGAGTGTCTGCTTGGATTGCTATGAGCCTTATGGCGAAGT
 
. : . : . : . : . : . :
rJMFF042O09+ TTTGGACAATTTATCATGGACTACAATTATGTTGGATAAAGCGTATTCAACTATTGAACT
                      ____________________________________________________________
consensus TTTGGACAATTTATCATGGACTACAATTATGTTGGATAAAGCGTATTCAACTATTGAACT