Contig 004097:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M05Sequence549005979 (7)gb|AAD32141.1|AF123503_12e-81Nt-gh3 deduced protein [Nicotiana tabacum]583004097 (9)gb|ABN05326.1|4e-74GH3 protein [Rhodiola sachalinensis]
JMFF018M18Sequence571005979 (7)gb|AAD32141.1|AF123503_13e-87Nt-gh3 deduced protein [Nicotiana tabacum]688004097 (9)gb|ABN05326.1|3e-88GH3 protein [Rhodiola sachalinensis]
JMFF025O09Sequence620005979 (7)emb|CDO97242.1|9e-98unnamed protein product [Coffea canephora]730004097 (9)gb|ABN05326.1|3e-83GH3 protein [Rhodiola sachalinensis]
JMFF039H15Sequence470000486 (2)gb|AAD32141.1|AF123503_15e-95Nt-gh3 deduced protein [Nicotiana tabacum]617004097 (9)gb|ABN05326.1|5e-74GH3 protein [Rhodiola sachalinensis]
JMFF042C19Sequence650005979 (7)emb|CDO97242.1|7e-106unnamed protein product [Coffea canephora]620004097 (9)gb|ABN05326.1|2e-65GH3 protein [Rhodiola sachalinensis]
JMFF043L14Sequence637005979 (7)gb|AAD32141.1|AF123503_13e-103Nt-gh3 deduced protein [Nicotiana tabacum]395004097 (9)gb|EPS68048.1|2e-14hypothetical protein M569_06726, partial [Genlisea aurea]
JMFN003P11Sequence497004097 (9)gb|ABN05326.1|1e-43GH3 protein [Rhodiola sachalinensis]
JMFN020M19Sequence387004097 (9)ref|XP_004230721.1|4e-55PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycope
JMFN038P18Sequence608004097 (9)ref|XP_004230721.1|2e-108PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycope

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-                                                         GCCGCAGTTCCACT
JMFN038P18-                                          GTTCCACAACTCGGCGCCGCAGTTCCACT
rJMFF025O09+                                                        GCCGCAGTTCCACT
                      ____________________________________________________________
consensus                                            GTTCCACAACTCGGCGCCGCAGTTCCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           TCGTTAGGAGAAAGAACGTTCTACTCAGCATCGACTCGGACAAAACCGACGAGG-CCGAG
JMFN038P18-           TCGTTAGGAGAAAGAACGTTCTACTCAGCATCGACTCGGACAAAACCGACGAGG-CCGAG
rJMFF018M18+                               TACTCAGCATCGACTCGGACAAAACCGACGAGG-CCGAG
rJMFF025O09+          TNGTTAGGAGAAAGAACGTTTTACTCAGCATCGACTCGGACAAAACCGACGAGGCCCGAG
                      ____________________________________________________________
consensus             TCGTTAGGAGAAAGAACGTTCTACTCAGCATCGACTCGGACAAAACCGACGAGG-CCGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           TT-CAGGGCGCCGTGGAGAACGCCTCGAAGCTCCTAACTCAGTTCAACACCAGCGTGGTC
JMFN038P18-           TTACAGGGCGCCGTGGAGAACGCCTCGAAGCTCCTAACTCAGTTCAACACCAGCGTGGTC
rJMFF039H15+                                            TAACTCAGTTCAACNCCAGNGTGGTC
rJMFF018M18+          TTACAGGGCGCCGTGGAGAACGCCTCGAAGCTCCTAACTCAGTTCAACACCAGCGTGGTC
rJMFF005M05+                                         TCCTAACTCAGTTCAACACCAGCGTGGTC
rJMFF025O09+          TTACAGGGCGCCGTGGAGAACGCCTNGAAGCTCCTAACTCAGTTCAACACCAGCGTGGTC
                      ____________________________________________________________
consensus             TTACAGGGCGCCGTGGAGAACGCCTCGAAGCTCCTAACTCAGTTCAACACCAGCGTGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           GAGTACACGAGTTACGCCGACGCGAACACCATCCCGGGACATTACGTCATATATTGGGAG
JMFN038P18-           GAGTACACGAGTTACGCCGACGCGAACACCATCCCGGGACATTACGTCATATATTGGGAG
rJMFF039H15+          GAGTACACGAGTTACGCCGACGCGAACACCATCCCGGGACATTACGTCATATATTGGGAG
rJMFF018M18+          GAGTACACGAGTTACGCCGACGNGAACACCATCCCGGGACATTACGTCATATATTGGGAG
rJMFF005M05+          GAGTACACGAGTTACGCCGACGCGAACNCCATCCCGGGACATTACGTCATATATTGGGAG
rJMFF025O09+          GAGTACACGAGTTACGCCGACGCGAACACCATCCCGGGACATTACGTCATATATTGGGAG
rJMFF042C19+                                                 CATTACGTCATATATTGGGAG
                      ____________________________________________________________
consensus             GAGTACACGAGTTACGCCGACGCGAACACCATCCCGGGACATTACGTCATATATTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
JMFN038P18-           CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
rJMFF039H15+          CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
rJMFF018M18+          CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
rJMFF005M05+          CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
rJMFF025O09+          CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
rJMFF042C19+          CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
                      ____________________________________________________________
consensus             CTGTTAATGAGAGACCCGTCGAACTCGCCCAGCAAGGAGGTGTTGGACCAGTGCTGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
JMFN038P18-           GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
rJMFF039H15+          GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
rJMFF018M18+          GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
rJMFF005M05+          GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
rJMFF025O09+          GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
JMFN003P11-                                   GTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
rJMFF042C19+          GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
                      ____________________________________________________________
consensus             GCCATGGAAGAGTCGCTGAACTCGGTGTACCGACAAGGCCGAGTCGAGTGCAACTCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
JMFN038P18-           GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
rJMFF039H15+          GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTNGAAGAACTGATGGACTACGCG
rJMFF018M18+          GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTNGAAGAACTGATGGACTACGCG
rJMFF005M05+          GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTNGAAGAACTGATGGACTACGCG
rJMFF025O09+          GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
JMFN003P11-           GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
rJMFF042C19+          GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
                      ____________________________________________________________
consensus             GGGCCCCTGGAAATCCGAGTCGTGAAAAGCGGCACGTTCGAAGAACTGATGGACTACGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN020M19-           ATCT                                                        
JMFN038P18-           ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
rJMFF039H15+          ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCT
rJMFF018M18+          ATNTNTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
rJMFF005M05+          ATCTNTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
rJMFF025O09+          ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
JMFN003P11-           ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
rJMFF043L14+                           GATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
rJMFF042C19+          ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
                      ____________________________________________________________
consensus             ATCTCTCGAGGCGCGTCGATTAACCAGTACAAGGTTCCCAGATGTGTTAGCTTCGCACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038P18-           ATCATGGAACTCCTCGACTCACGGGTGGTTTCGTCGCACTTCAGCCCCTCTCTGCCACGT
rJMFF039H15+          ATCATGGAACTCCTCGACTCACGGGTGGTTTCGTCGCACTTCAGCCCCTNTNTGCCACGT
rJMFF018M18+          ATCATGGAACTCCTNGACTCACGGGTGGTTTNGTCGCACTTCAGCCCCTNTNTGCCACGT
rJMFF005M05+          ATCATGGAACTCCTCGACTCACGGGTGGTTTNGTCGCACTTCAGCCCCTNTNTGCCACGT
rJMFF025O09+          ATCATGGAACTCCTCGACTCACGGGTGGTTTNGTCGCACTTCAGCCCCTNTNTGCCACGT
JMFN003P11-           ATCATGGAACTCCTCGACTCACGGGTGGTTTCGTCGCACTTCAGCCCCTCTCTGCCACGT
rJMFF043L14+          ATCATGGAACTCCTCGACTCACGGGTGGTTTTGTCGCACTTCAGCCCCTTTTTGCCACGT
rJMFF042C19+          ATCATGGAACTCCTCGACTCACGGGTGGTTTCGTCGCACTTCAGCCCCTCTCTGCCACGT
                      ____________________________________________________________
consensus             ATCATGGAACTCCTCGACTCACGGGTGGTTTCGTCGCACTTCAGCCCCTCTCTGCCACGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038P18-           TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF039H15+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF018M18+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF005M05+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF025O09+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
JMFN003P11-           TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF043L14+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
rJMFF042C19+          TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
                      ____________________________________________________________
consensus             TGGACTCCTGAACGAAAATGTTGACCCGACCCAGTCAACCCAAGTCATTTAGGAACCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN038P18-           CCCCCTCTTCAGNTTTTTTTTTCTTTTTTATTTTTATTTT                    
rJMFF039H15+          CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
rJMFF018M18+          CCCCCTNTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
rJMFF005M05+          CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
rJMFF025O09+          CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
JMFN003P11-           CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
rJMFF043L14+          CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
rJMFF042C19+          CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
                      ____________________________________________________________
consensus             CCCCCTCTTCAGTTTTTTTTTTCTTTTTTATTTTTATTTTCTCTGTCACCTTTTGTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039H15+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
rJMFF018M18+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
rJMFF005M05+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
rJMFF025O09+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
JMFN003P11-           AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
rJMFF043L14+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTTTGCTGTCTCATG
rJMFF042C19+          AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
                      ____________________________________________________________
consensus             AGATTTTTTATTGTATCTAGATTAGGACGTTTGGGAAGAATTAGGTTCTGCTGTCTCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039H15+          AATGCTTTAACATGTGAAAAGGATGTAAT-ATCCCATGCT                    
rJMFF018M18+          AATGCTTTAACATGNGAAAAGGATGTAAT-ATCCCATGCTTGTNCAAATCA         
rJMFF005M05+          AATGCTTTAACATG                                              
rJMFF025O09+          AATGCTTTAACATGTGAAAAGGATGTAATAATCCCATGCTTGTTCAAATCAAC       
JMFN003P11-           AATGCTTTAACATGTGAAAAGGATGTAAT-ATCCCATGCTTGTTCAAATCAACTGTTTCT
rJMFF043L14+          AATGCTTTAACATGTGAAAAGGATGTAAT-ATCCCATGCTTGTTCAAATCAACTGTTTCT
rJMFF042C19+          AATGCTTTAACATGTGAAAAGGATGTAAT-ATCCCATGCTTGTTCAAATCAACTGTTTCT
                      ____________________________________________________________
consensus             AATGCTTTAACATGTGAAAAGGATGTAAT-ATCCCATGCTTGTTCAAATCAACTGTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN003P11-           TTCGTCCAAGCAACTAATGCATTATGGCACTATTGACTAAGA                  
rJMFF043L14+          TTCGTCCAAGCAACTAATGCATTATGGCACTATTGACTAAGATAATTATTTAT       
rJMFF042C19+          TTCGTCCAAGCAACTAATGCATTATGGCACTATTGACTAAGATAATTATTTATCTTCTAT
                      ____________________________________________________________
consensus             TTCGTCCAAGCAACTAATGCATTATGGCACTATTGACTAAGATAATTATTTATCTTCTAT