Contig 004079:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037P17Sequence585010640 (2)ref|XP_004243384.1|8e-28PREDICTED: NAC domain-containing protein 8 [Solanum lycopersicum]717004079 (2)ref|XP_009587632.1|83.6PREDICTED: NAC domain-containing protein 8-like [Nicotiana tomentosiformis]
JMSF016C14Sequence357010640 (2)714004079 (2)ref|XP_011047704.1|197PREDICTED: NAC domain-containing protein 8-like [Populus euphratica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016C14+ TTATACGACCGGTACANGAAAGAGAAGGAAAGTGCACACGGACGTGGACGGGAAC
                      ____________________________________________________________
consensus TTATACGACCGGTACANGAAAGAGAAGGAAAGTGCACACGGACGTGGACGGGAAC
 
. : . : . : . : . : . :
rJMSF016C14+ GAAACCCGGTGGCACAAGACCGGGAAGACGAGGCCGGTGGCGGCGAAAGGCATGGTGAAA
                      ____________________________________________________________
consensus GAAACCCGGTGGCACAAGACCGGGAAGACGAGGCCGGTGGCGGCGAAAGGCATGGTGAAA
 
. : . : . : . : . : . :
rJMSF016C14+ GGGTACAAGAAAATACTGGTGCTGTACACCAACTACGGGAAGCAAAGGAAACCCGAGAAA
                      ____________________________________________________________
consensus GGGTACAAGAAAATACTGGTGCTGTACACCAACTACGGGAAGCAAAGGAAACCCGAGAAA
 
. : . : . : . : . : . :
rJMSF016C14+ NCCAACTGGGTGATGCACCAGTACCACCTGGGAGACGACGAGGACGAGAAAGAAGGCGAG
                      ____________________________________________________________
consensus NCCAACTGGGTGATGCACCAGTACCACCTGGGAGACGACGAGGACGAGAAAGAAGGCGAG
 
. : . : . : . : . : . :
rJMSF016C14+ CTCGTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
rJMFF037P17+ GTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
                      ____________________________________________________________
consensus CTCGTGGTGTCAAAGGTTTTCTACCAAACACAACCTAGACAATGCGGTTCTCTCCTCAGG
 
. : . : . : . : . : . :
rJMSF016C14+ GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
rJMFF037P17+ GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
                      ____________________________________________________________
consensus GATTCTCCTCCTCTACTTCAGGCGGGGCCGCCCGCCGGACGAAAGCCCGGCTCTCATCTT
 
. : . : . : . : . : . :
rJMSF016C14+ AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
rJMFF037P17+ AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
                      ____________________________________________________________
consensus AGGGAAGCTTCAACAATGGTGGAATCCTTCAACCCAACTCTCATCTCCTTCGATCAATTC
 
. : . : . : . : . : . :
rJMSF016C14+ GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
rJMFF037P17+ GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
                      ____________________________________________________________
consensus GACCATAATCGTCCCACTTCTCGACTCCTCCCAACTTTCAACATGCATGACACTTCTTTC
 
. : . : . : . : . : . :
rJMSF016C14+ ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
rJMFF037P17+ ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
                      ____________________________________________________________
consensus ATTCCTTAATTATTAGCTTACTTAATTTTAACTGTCTCTGATCTTTTCTTAAGGTCTTAA
 
. : . : . : . : . : . :
rJMSF016C14+ AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
rJMFF037P17+ AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
                      ____________________________________________________________
consensus AATATATGTTGATGGGATAGATGATGATGATGAAGAAGTTAACTTGAAGCAGTTATGGTG
 
. : . : . : . : . : . :
rJMSF016C14+ GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
rJMFF037P17+ GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
                      ____________________________________________________________
consensus GTGAATAAGTTAACTTACTGGGGTGGTTAGGGGGGGAAGAATAAGGGGGAGTGAGCAGAA
 
. : . : . : . : . : . :
rJMSF016C14+ TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAA
rJMFF037P17+ TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAAT
                      ____________________________________________________________
consensus TAAACTTCTGATTTAAGGTTGGAATTGAAGTTGAGGCTCAACCCTAATAGATCGAGTAAT
 
. : . : . : . : . : . :
rJMFF037P17+ TATGATATCTTAAACTTTCTGAAATGGAATTTTTTTTTAATTATAATGCATGTTTTAATT
                      ____________________________________________________________
consensus TATGATATCTTAAACTTTCTGAAATGGAATTTTTTTTTAATTATAATGCATGTTTTAATT
 
. : . : . : . : . : . :
rJMFF037P17+ ACTTTGTACAGTAGTAATGCAGAAGTGGTTATGTACACGGCTCAGGATTTATGATCCATT
                      ____________________________________________________________
consensus ACTTTGTACAGTAGTAATGCAGAAGTGGTTATGTACACGGCTCAGGATTTATGATCCATT
 
. : . : . : . : . : . :
rJMFF037P17+ GACTGGCAGAGTTATCATAAAAGATCAAGTTCAAGTGTACAAAGATACTCCAGATGATAT
                      ____________________________________________________________
consensus GACTGGCAGAGTTATCATAAAAGATCAAGTTCAAGTGTACAAAGATACTCCAGATGATAT
 
. : . : . : . : . : . :
rJMFF037P17+ ATAACTTAATGTATTATTACTTTTAATGTTCGTTGTTTCATTTCTGGGTAACCATTATAT
                      ____________________________________________________________
consensus ATAACTTAATGTATTATTACTTTTAATGTTCGTTGTTTCATTTCTGGGTAACCATTATAT