Contig 004070:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034M16Sequence510004809 (8)ref|XP_006436144.1|2e-32hypothetical protein CICLE_v10030782mg [Citrus clementina] ref|XP_006485994.1| P649004070 (5)gb|AAS76671.1|3e-115WBC1 ABC transporter [Nicotiana tabacum]
JMFF043P14Sequence632004809 (8)ref|XP_003633443.1|5e-52PREDICTED: ABC transporter G family member 6-like [Vitis vinifera]465004070 (5)gb|AAS76671.1|8e-94WBC1 ABC transporter [Nicotiana tabacum]
JMFN008A24Sequence615004070 (5)emb|CDP00016.1|1e-106unnamed protein product [Coffea canephora]
JMFN043D19Sequence597004070 (5)ref|XP_009626224.1|3e-91PREDICTED: ABC transporter G family member 6 [Nicotiana tomentosiformis]
JMSF035J06Sequence707004809 (8)ref|XP_009626224.1|3e-52PREDICTED: ABC transporter G family member 6 [Nicotiana tomentosiformis]706004070 (5)ref|XP_009796484.1|1e-133PREDICTED: ABC transporter G family member 1-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN008A24- CTGAAGGAAGCCATCAGCGCC
                      ____________________________________________________________
consensus CTGAAGGAAGCCATCAGCGCC
 
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JMFN008A24- AGTATTTCCCGGGGAAAACTAGTCCCCGGAGCGACGAATGACGCCAGCACTACGTCACTG
                      ____________________________________________________________
consensus AGTATTTCCCGGGGAAAACTAGTCCCCGGAGCGACGAATGACGCCAGCACTACGTCACTG
 
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JMFN008A24- GTCCCCACTTTCGCCAACCCGTTCTGGACGGAAATGGTGGTTCTCTCCAAACGGTCCTTT
                      ____________________________________________________________
consensus GTCCCCACTTTCGCCAACCCGTTCTGGACGGAAATGGTGGTTCTCTCCAAACGGTCCTTT
 
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JMFN008A24- AAAAACTCGAGCCGGATGCCCGCACTTTTCGGGACACGGTTAGGAGCGGTTATGGTGACC
                      ____________________________________________________________
consensus AAAAACTCGAGCCGGATGCCCGCACTTTTCGGGACACGGTTAGGAGCGGTTATGGTGACC
 
. : . : . : . : . : . :
JMFN008A24- GGATTCATCCTAGCTACAATGTTCTGGCGACTCGATAATTCCCCCAAAGGAGTACAGGAA
                      ____________________________________________________________
consensus GGATTCATCCTAGCTACAATGTTCTGGCGACTCGATAATTCCCCCAAAGGAGTACAGGAA
 
. : . : . : . : . : . :
JMFN008A24- CGGCTAGGATTCTTCGCCTTCGCGATGTCCACAACCTTCTACACGTGCGCCGACGCGCTG
JMFN043D19- GCTG
rJMSF035J06+ GCTG
                      ____________________________________________________________
consensus CGGCTAGGATTCTTCGCCTTCGCGATGTCCACAACCTTCTACACGTGCGCCGACGCGCTG
 
. : . : . : . : . : . :
JMFN008A24- CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
JMFN043D19- CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
rJMSF035J06+ CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
                      ____________________________________________________________
consensus CCGGTGTTCATCCAGGAACGGTATATTTTCCTGAGAGAAACGGCGTACAACGCCTACCGG
 
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JMFN008A24- AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
JMFN043D19- AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
rJMSF035J06+ AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
                      ____________________________________________________________
consensus AGATCCTCCTACTGTCTCTCCCACGCGCTGGTCTCCTTCCCGTCGCTAGTCTTCCTCGCG
 
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JMFN008A24- TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
JMFN043D19- TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
rJMSF035J06+ TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
rJMFF034M16+ GGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
                      ____________________________________________________________
consensus TTCGCCTTCGCGGCGCTGACTTTCTGGGCGGTAGGGCTCGACGGCGGAACTTCTGGATTC
 
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JMFN008A24- TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
JMFN043D19- TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
rJMSF035J06+ TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
rJMFF034M16+ TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
                      ____________________________________________________________
consensus TTCTTCTACTTCGGCATCATCGTGGCCTCATTCTGGGCCGGAAACTCCTTCGTCACGTTC
 
. : . : . : . : . : . :
JMFN008A24- CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATGGTCGTCGCCATC
JMFN043D19- CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMSF035J06+ CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMFF043P14+ TCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
rJMFF034M16+ CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
                      ____________________________________________________________
consensus CTCTCCGGCGTCGTCCCGCACGTGATGCTCGGATACACCATCGTCGTCGCCATCCTCGCC
 
. : . : . : . : . : . :
JMFN043D19- TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMSF035J06+ TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMFF043P14+ TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
rJMFF034M16+ TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
                      ____________________________________________________________
consensus TACTTCCTCCTCTTCTCCGGCTTCTTCATGAACCGCGACCGGATTCCGCCGTACTGGATC
 
. : . : . : . : . : . :
JMFN043D19- TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMSF035J06+ TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMFF043P14+ TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
rJMFF034M16+ TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
                      ____________________________________________________________
consensus TGGTTCCACTATCTCTCCCTCGTCAAATACCCCTACGAGGCCGTGCTTCAGAACGAATTC
 
. : . : . : . : . : . :
JMFN043D19- GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMSF035J06+ GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMFF043P14+ GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
rJMFF034M16+ GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
                      ____________________________________________________________
consensus GACGATCCGACCAAATGCTTCGTCCGGGGGATCCAAATGTTCGACAACTCGCCGCTGAGC
 
. : . : . : . : . : . :
JMFN043D19- GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGAT-AGCAGCACGCTGAACATT
rJMSF035J06+ GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
rJMFF043P14+ GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
rJMFF034M16+ GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
                      ____________________________________________________________
consensus GCGGTGTCGACGCCGCTCAAGGAGCGGCTGCTGAGCACGATGAGCAGCACGCTGAACATT
 
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JMFN043D19- AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCG
rJMSF035J06+ AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
rJMFF043P14+ AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
rJMFF034M16+ AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
                      ____________________________________________________________
consensus AAGATCACGGCGACCACGTGCGTCACCACCGGCGCCGACATTCTGGCGCAGCAGGGAGTG
 
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rJMSF035J06+ ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
rJMFF043P14+ ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
rJMFF034M16+ ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
                      ____________________________________________________________
consensus ACGGACCTCAGCAAGTGGGGGTGCTTGTGGGTGACGATTGCATGGGGATTTTTCTTTAGG
 
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rJMSF035J06+ ATTTTATTTTATTTCTGCCTG
rJMFF043P14+ ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCC
rJMFF034M16+ ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCCAA
                      ____________________________________________________________
consensus ATTTTATTTTATTTCTGCCTGTTACTGGGAAGCAAGAACAAGAGAAGGTAATAAGTCCAA
 
. : . : . : . : . : . :
rJMFF034M16+ AAAAAGAAAAAAACACTACTATACGGAGTATTAATTACTCACTGTAAAACTAAAGTTTCT
                      ____________________________________________________________
consensus AAAAAGAAAAAAACACTACTATACGGAGTATTAATTACTCACTGTAAAACTAAAGTTTCT