Contig 004052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F04Sequence548003202 (9)ref|XP_009338145.1|1e-57PREDICTED: proliferation-associated protein 2G4-like, partial [Pyrus x bretschn714004052 (2)ref|XP_011095038.1|5e-97PREDICTED: proliferation-associated protein 2G4-like [Sesamum indicum]
JMFF030M10Sequence418003202 (9)ref|XP_009338145.1|8e-25PREDICTED: proliferation-associated protein 2G4-like, partial [Pyrus x bretschn748004052 (2)ref|XP_011095038.1|3e-104PREDICTED: proliferation-associated protein 2G4-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF030M10+                                          GAAGCAGTTTGTGATTGACGGGANCAAA
                      ____________________________________________________________
consensus                                             GAAGCAGTTTGTGATTGACGGGANCAAA
 
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rJMFF002F04+                      GTGTCTAACGCTGAAACTAGAGTTGATGAAGCGGAATTTGAAGAAAAC
rJMFF030M10+          GTTGTATTGAGTGTGTCTAACGCTGAAACTAGAGTTGATGAAGCGGAATTTGAAGAAAAC
                      ____________________________________________________________
consensus             GTTGTATTGAGTGTGTCTAACGCTGAAACTAGAGTTGATGAAGCGGAATTTGAAGAAAAC
 
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rJMFF002F04+          GAGGTTTATTCAATTGACATTGTGACCAGCACGGGCGAAGGAAAGCCGAAGATACTGGAT
rJMFF030M10+          GAGGTTTATTCAATTGACATTGTGACCAGCACGGGCGAAGGAAAGCCGAAGATACTGGAT
                      ____________________________________________________________
consensus             GAGGTTTATTCAATTGACATTGTGACCAGCACGGGCGAAGGAAAGCCGAAGATACTGGAT
 
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rJMFF002F04+          GAGAAACAAACGACTATTTATAAGAGAGCGGTGGACAAAAATTATAACTTGAAGATGAAA
rJMFF030M10+          GAGAAACAAACGACTATTTATAAGAGAGCGGTGGACAAAAATTATAACTTGAAGATGAAA
                      ____________________________________________________________
consensus             GAGAAACAAACGACTATTTATAAGAGAGCGGTGGACAAAAATTATAACTTGAAGATGAAA
 
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rJMFF002F04+          GCATCAAGATTCATCTATAGCGAAATCAGTCAGAAGTTCCCGCTCATGCCCTTCACCGCA
rJMFF030M10+          GCATCAAGATTCATCTATAGCGAAATCAGTCAGAAGTTCCCGCTCATGCCCTTCACCGCA
                      ____________________________________________________________
consensus             GCATCAAGATTCATCTATAGCGAAATCAGTCAGAAGTTCCCGCTCATGCCCTTCACCGCA
 
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rJMFF002F04+          AGGGAATTGGAGGAAAAGCGGGCCCGTCTTGGACTCGTTGAATGTGTTAACCACGACCTA
rJMFF030M10+          AGGGAATTGGAGGAAAAGCGGGCCCGTCTTGGACTCGTTGAATGTGTTAACCACGACCTA
                      ____________________________________________________________
consensus             AGGGAATTGGAGGAAAAGCGGGCCCGTCTTGGACTCGTTGAATGTGTTAACCACGACCTA
 
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rJMFF002F04+          TTGCAGCCATATCCTGTTCTACACGAGAAACCCGGTGATTTGGTTGCTCATATAAAATTC
rJMFF030M10+          TTGCAGCCATATCCTGTTCTACACGAGAAACCCGGTGATTTGGTTGCTCATATAAAATTC
                      ____________________________________________________________
consensus             TTGCAGCCATATCCTGTTCTACACGAGAAACCCGGTGATTTGGTTGCTCATATAAAATTC
 
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rJMFF002F04+          ACGGTTCTCTTAATGCCCAATGGGTCTGATAGGATCACCGCCCATCCACTCCAGGAGCTG
rJMFF030M10+          ACGGTTCTCTTAATGCCCAATGGGTCTGATAGGATCACCGCCCATCCACTCCAGGAGCTG
                      ____________________________________________________________
consensus             ACGGTTCTCTTAATGCCCAATGGGTCTGATAGGATCACCGCCCATCCACTCCAGGAGCTG
 
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rJMFF002F04+          AACGTGACAAAACCAATAGATGATCCCGAGATAAAGGCATGGCTAGCCCTTCCAACAAAG
rJMFF030M10+          AACGTGACAAAACCAATAGATGATCCCGAGATAAAGGCATGGCTAGCCCTTCCAACAAAG
                      ____________________________________________________________
consensus             AACGTGACAAAACCAATAGATGATCCCGAGATAAAGGCATGGCTAGCCCTTCCAACAAAG
 
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rJMFF002F04+          ACCAAGAAGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGAGAGAAGGCAGAAGAG
rJMFF030M10+          ACCAAGAAGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGAGAGAAGGCAGAAGAG
                      ____________________________________________________________
consensus             ACCAAGAAGAAAGGCGGGGGGAAGAAAAAGAAAGGCAAGAAAGGAGAGAAGGCAGAAGAG
 
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rJMFF002F04+          GCAGCACAGACCGAGCCAACGGGTGAAGAAGCTACAAACAGATCCAAGCCTTAGCGAAAC
rJMFF030M10+          GCAGCACAGACCGAGCCAACGGGTGAAGAAGCTACAAACAGATCCAAGCCTTAGCGAAAC
                      ____________________________________________________________
consensus             GCAGCACAGACCGAGCCAACGGGTGAAGAAGCTACAAACAGATCCAAGCCTTAGCGAAAC
 
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rJMFF002F04+          GCCTCTTATATTATTATTGGTCATAACCAAATCACTTTTGAAAAAAGCTCGGTTCTTTGA
rJMFF030M10+          GCCTCTTATATTATTATTGGTCATAACCAAATCACTTTTGAAAAAAGCTCGGTTCTTTGA
                      ____________________________________________________________
consensus             GCCTCTTATATTATTATTGGTCATAACCAAATCACTTTTGAAAAAAGCTCGGTTCTTTGA
 
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rJMFF002F04+          ACGATCATAGTGACATGTTGAGCTGATTGTGCTTCCTTCTTTCGATATTCTTATACAAA 
rJMFF030M10+          ACGATCATAGTGACATGTTGAGCTGATTGTGCTTCCTTCTTTCGATATTCTTATACAAAG
                      ____________________________________________________________
consensus             ACGATCATAGTGACATGTTGAGCTGATTGTGCTTCCTTCTTTCGATATTCTTATACAAAG