Contig 004042:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049G24+                                            CTCCATACCCCTCCAGTGATCATAGA
                      ____________________________________________________________
consensus                                               CTCCATACCCCTCCAGTGATCATAGA
 
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rJMSF049G24+          ACAATGGCTTTAAATGAGTCCAAGCTAGCAGGAGCAGATTCTCCTATAATGAAAGATAAT
                      ____________________________________________________________
consensus             ACAATGGCTTTAAATGAGTCCAAGCTAGCAGGAGCAGATTCTCCTATAATGAAAGATAAT
 
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rJMSF049G24+          GCAGTAGTATCATCTCCTCCATTATCACCTATTTCTGTGTCAAACATTTCAACTCTTTCA
                      ____________________________________________________________
consensus             GCAGTAGTATCATCTCCTCCATTATCACCTATTTCTGTGTCAAACATTTCAACTCTTTCA
 
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rJMSF049G24+          GTAGTGGGCACCAGTTCTGGGCAGATCAGAGTGGACGCAGGTGGAAGATGATATGAGCGT
rJMFF027D04+                                        GTGGACGCAGGTGGAAGATGATATGAGCGT
                      ____________________________________________________________
consensus             GTAGTGGGCACCAGTTCTGGGCAGATCAGAGTGGACGCAGGTGGAAGATGATATGAGCGT
 
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rJMSF049G24+          CCCTTGCCAATGTCCCACTGTACCCTTCTGCTGAGTTCAGACCTCTTGTGGTTCTTCACA
rJMFF027D04+          CCCTTGCCAATGTCCCACTGTACCCTTCTGCTGAGTTCAGACCTCTTGTGGTTCTTCACA
                      ____________________________________________________________
consensus             CCCTTGCCAATGTCCCACTGTACCCTTCTGCTGAGTTCAGACCTCTTGTGGTTCTTCACA
 
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rJMSF049G24+          GTCCACAGAGCAGAGTTTGTTGACACAAGGTTGTGCTGGTATAGGGCTGTAAATGATATA
rJMFF027D04+          GTCCACAGAGCAGAGTTTGTTGACACAAGGTTGTGCTGGTATAGGGCTGTAAATGATATA
                      ____________________________________________________________
consensus             GTCCACAGAGCAGAGTTTGTTGACACAAGGTTGTGCTGGTATAGGGCTGTAAATGATATA
 
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rJMSF049G24+          ATTTTGTTGGATTTACATTTAATTATTCCGCCCCCGTTGAGTATTATATTATACATCAGT
rJMFF027D04+          ATTTTGTTGGATTTACATTTAATTATTCCGCCCCCGTTGAGTATTATATTATACATCAGT
                      ____________________________________________________________
consensus             ATTTTGTTGGATTTACATTTAATTATTCCGCCCCCGTTGAGTATTATATTATACATCAGT
 
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rJMSF049G24+          TTTGACCATATGATGATGTCTCTTGATAACACAAAAATCCTCTCCCCTTGCCCTGCTGCT
rJMFF027D04+          TTTGACCATATGATGATGTCTCTTGATAACACAAAAATCCTCTCCCCTTGCCCTGCTGCT
                      ____________________________________________________________
consensus             TTTGACCATATGATGATGTCTCTTGATAACACAAAAATCCTCTCCCCTTGCCCTGCTGCT
 
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rJMSF049G24+          GTGCCCAAATGAACACTCCATTCCACAAGGAATAGAGAAAGGGAAGAGTATAAAACATTG
rJMFF027D04+          GTGCCCAAATGAACACTCCATTCCACAAGGAATAGAGAAAGGGAAGAGTATAAAACATTG
                      ____________________________________________________________
consensus             GTGCCCAAATGAACACTCCATTCCACAAGGAATAGAGAAAGGGAAGAGTATAAAACATTG
 
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rJMSF049G24+          TTTCTTTTATGTGTATTTTGTAAAGGGTAGGAACTGAGTGGTCTTCATTTGAAGAGGTGT
rJMFF027D04+          TTTCTTTTATGTGTATTTTGTAAAGGGTAGGAACTGAGTGGTCTTCATTTGAAGAGGTGT
                      ____________________________________________________________
consensus             TTTCTTTTATGTGTATTTTGTAAAGGGTAGGAACTGAGTGGTCTTCATTTGAAGAGGTGT
 
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rJMSF049G24+          TTTTGTTTATAGTACATAGCGAATAGGTATTTTGGGTTAAGGAACCTGTCGTGCTCGTTC
rJMFF027D04+          TTTTGTTTATAGTACATAGCGAATAGGTATTTTGGGTTAAGGAACCTGTCGTGCTCGTTC
                      ____________________________________________________________
consensus             TTTTGTTTATAGTACATAGCGAATAGGTATTTTGGGTTAAGGAACCTGTCGTGCTCGTTC
 
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rJMSF049G24+          ACGTCACCTGTATCACGTTTTTGTTGCTTGTGGCTCTGTCTGTGTCTTTCGGTTTTCCTT
rJMFF027D04+          ACGTCACCTGTATCACGTTTTTGTTGCTTGTGGCTCTGTCTGTGTCTTTCGGTTTTCCTT
                      ____________________________________________________________
consensus             ACGTCACCTGTATCACGTTTTTGTTGCTTGTGGCTCTGTCTGTGTCTTTCGGTTTTCCTT
 
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rJMSF049G24+          GTAAGTTAATGTTCCAGGTTATGGACTTATGGTACACCATT                   
rJMFF027D04+          GTAAGTTAATGTTCCAGGTTATGGACTTATGGTACACCATTCTTTTGTTTCTTAAGAAAG
                      ____________________________________________________________
consensus             GTAAGTTAATGTTCCAGGTTATGGACTTATGGTACACCATTCTTTTGTTTCTTAAGAAAG