clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006A16 | Sequence | 568 | 004040 (5) | ref|XP_009591146.1| | 99.4 | PREDICTED: uncharacterized protein LOC104088207 [Nicotiana tomentosiformis] | 719 | 004040 (5) | ref|XP_004241974.1| | 228 | PREDICTED: uncharacterized protein LOC101245175 [Solanum lycopersicum] ref|XP_00 |
JMFF027B04 | Sequence | 721 | 004040 (5) | ref|XP_009591146.1| | 229 | PREDICTED: uncharacterized protein LOC104088207 [Nicotiana tomentosiformis] | |||||
JMFF027B15 | Sequence | 373 | 004040 (5) | ref|XP_004241974.1| | 89.7 | PREDICTED: uncharacterized protein LOC101245175 [Solanum lycopersicum] ref|XP_00 | |||||
JMFS073B11 | Sequence | 642 | 004040 (5) | ref|XP_009591146.1| | 243 | PREDICTED: uncharacterized protein LOC104088207 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF006A16- AATCACCACCAGATACAAAGTTTGAGAGGAGAGAGAGAGAAGCTAAAAGAGTTT
____________________________________________________________
consensus AATCACCACCAGATACAAAGTTTGAGAGGAGAGAGAGAGAAGCTAAAAGAGTTT
. : . : . : . : . : . :
JMFF006A16- TTGGGAGAGAGAGAAGCTAAAAGAGTTTTTGGAGAGAGAGAGAGAGAGATAGAAAGATGA
____________________________________________________________
consensus TTGGGAGAGAGAGAAGCTAAAAGAGTTTTTGGAGAGAGAGAGAGAGAGATAGAAAGATGA
. : . : . : . : . : . :
JMFF006A16- AGCTCTCACTGAAGGTCCAAGACTCCCAATGCTCTCCGCCGCCGCAACCACCGCCGTCGC
JMFS073B11- CCGCCGTCGC
____________________________________________________________
consensus AGCTCTCACTGAAGGTCCAAGACTCCCAATGCTCTCCGCCGCCGCAACCACCGCCGTCGC
. : . : . : . : . : . :
JMFF006A16- AGCTGTTGAGCAGCCACCAAAAACAGCCGGAGACGCGGCCGCTTCTCCTCGGAGCTAAAA
JMFS073B11- AGCTGTTGAGCAGCCACCAAAAACAGCCGGAGACGCGGCCGCTTCTCCTCGGAGCTAAAA
____________________________________________________________
consensus AGCTGTTGAGCAGCCACCAAAAACAGCCGGAGACGCGGCCGCTTCTCCTCGGAGCTAAAA
. : . : . : . : . : . :
JMFF006A16- TCCCGATCACCATCTTCAACCTTCCGTTTCTCTCCGGCTTCTCCACCACTACACACCACC
JMFS073B11- TCCCGATCACCATCTTCAACCTTCCGTTTCTCTCCGGCTTCTCCACCACTACACACCACC
____________________________________________________________
consensus TCCCGATCACCATCTTCAACCTTCCGTTTCTCTCCGGCTTCTCCACCACTACACACCACC
. : . : . : . : . : . :
JMFF006A16- CCTCCGACCTCTCCCTCTCCCTCGCCACCAACTTCTCCTCCGGCCCGACTCTTAAGCTCG
JMFS073B11- CCTCCGACCTCTCCCTCTCCCTCGCCACCAACTTCTCCTCCGGCCCGACTCTTAAGCTCG
____________________________________________________________
consensus CCTCCGACCTCTCCCTCTCCCTCGCCACCAACTTCTCCTCCGGCCCGACTCTTAAGCTCG
. : . : . : . : . : . :
JMFF006A16- CCTACACCGCCACCTCTTCCTCCTCATCGACCTCCGCCCCCGCTGCGCCTCCGCTAACGC
JMFS073B11- CCTACACCGCCACCTCTTCCTCCTCATCGACCTCCGCCCCCGCTGCGCCTCCGCTAACGC
____________________________________________________________
consensus CCTACACCGCCACCTCTTCCTCCTCATCGACCTCCGCCCCCGCTGCGCCTCCGCTAACGC
. : . : . : . : . : . :
JMFF006A16- TCACCCTCAAATCGGGGATTGGCGTCTACGGCTCGCCTAAGAACTCTCCTCTTATCATCT
JMFS073B11- TCACCCTCAAATCGGGGATTGGCGTCTACGGCTCGCCTAAGAACTCTCCTCTTATCATCT
____________________________________________________________
consensus TCACCCTCAAATCGGGGATTGGCGTCTACGGCTCGCCTAAGAACTCTCCTCTTATCATCT
. : . : . : . : . : . :
JMFF006A16- CCGCCAATTTCTCTTTCTCCCCTCATAGCCCCCATTCTAATCCCACTTTCTCTTTGCTCC
JMFS073B11- CCGCCAATTTCTCTTTCTCCCCTCATAGCCCCCATTCTAATCCCACTTTCTCTTTGCTCC
____________________________________________________________
consensus CCGCCAATTTCTCTTTCTCCCCTCATAGCCCCCATTCTAATCCCACTTTCTCTTTGCTCC
. : . : . : . : . : . :
JMFF006A16- TCAAACCCCAGCTCGG
JMFS073B11- TCAAACCCCAGCTCGGCTCCTTCTCTCTGAAGAAGGCCACTTCTTCGAACCCTAACCCTA
____________________________________________________________
consensus TCAAACCCCAGCTCGGCTCCTTCTCTCTGAAGAAGGCCACTTCTTCGAACCCTAACCCTA
. : . : . : . : . : . :
JMFS073B11- ATCCCAAACAGAACGCGGAGGCAAATTCGTTTGGGTTTGTTCCGTTGGAGAGGCCTATGA
rJMFF006A16+ ATCCCAAACAGAACGCGGAGGCAAATTCGTTTGGGTTTGTTCCGTTGGAGAGGCCTATGA
rJMFF027B04+ ATCCCAAACAGAACGCGGAGGCAAATTCGTTTGGGTTTGTTCCGTTGGAGAGGCCTATGA
____________________________________________________________
consensus ATCCCAAACAGAACGCGGAGGCAAATTCGTTTGGGTTTGTTCCGTTGGAGAGGCCTATGA
. : . : . : . : . : . :
JMFS073B11- GCTTAAAGGACTTTTCCTTTGAGGATTATGGTAAAGACTCGATCTTTACGGGGATTTCGG
rJMFF006A16+ GCTTAAAGGCCTTTTCCTTTGAGGATTATGGTAAAGACTCGATCTTTACGGGGATTTCGG
rJMFF027B04+ GCTTAAAGGACTTTTCCTTTGAGGATTATGGTAAAGACTCGATCTTTACGGGGATTTCGG
____________________________________________________________
consensus GCTTAAAGGACTTTTCCTTTGAGGATTATGGTAAAGACTCGATCTTTACGGGGATTTCGG
. : . : . : . : . : . :
JMFS073B11- TGATGGCCAGGACTGAAATGCCAGTAACGAAGACGGTTTTGATGAATTGCCGATGGGGTG
rJMFF006A16+ TGATGGCCAGGACTGAAATGCCAGTAACGAAGACGGTTTTGATGAATTGCCGATGGGGTG
rJMFF027B04+ TGATGGCCAGGACTGAAATGCCAGTAACGAAGACGGTTTTGATGAATTGCCGATGGGGTG
____________________________________________________________
consensus TGATGGCCAGGACTGAAATGCCAGTAACGAAGACGGTTTTGATGAATTGCCGATGGGGTG
. : . : . : . : . : . :
JMFS073B11- TGAATTTTCCGGAGGATTTGGGGAAACGAATG
rJMFF006A16+ TGAATTTTCCGGAGGATTTGGGGAAACGAATGCCGCATCTGACTCTGAATAAGATTGGGA
rJMFF027B04+ TGAATTTTCCGGAGGATTTGGGGAAACGAATGCCGCATCTGACTCTGAATAAGATTGGGA
____________________________________________________________
consensus TGAATTTTCCGGAGGATTTGGGGAAACGAATGCCGCATCTGACTCTGAATAAGATTGGGA
. : . : . : . : . : . :
rJMFF006A16+ TTGAGAGGGTTGATGAGGTTATTAAGGAGGTGAAGGAGAAGAAGAGTGAGAGCAGTGGGG
rJMFF027B04+ TTGAGAGGGTTGATGAGGTTATTAAGGAGGTGAAGGAGAAGAAGAGTGAGAGCAGTGGGG
____________________________________________________________
consensus TTGAGAGGGTTGATGAGGTTATTAAGGAGGTGAAGGAGAAGAAGAGTGAGAGCAGTGGGG
. : . : . : . : . : . :
rJMFF006A16+ GTGAGGTGGAGTTGTTGAAAGGAATGTGTTTTTGGATGAAGAGGGAATTGGATACACTGC
rJMFF027B15+ CTGC
rJMFF027B04+ GTGAGGTGGAGTTGTTGAAAGGAATGTGTTTTTGGATGAAGAGGGAATTGGATACACTGC
____________________________________________________________
consensus GTGAGGTGGAGTTGTTGAAAGGAATGTGTTTTTGGATGAAGAGGGAATTGGATACACTGC
. : . : . : . : . : . :
rJMFF006A16+ AGGGAGAGAACCGAGAGATGAAGGCTAAGTTGGAAGAAATGAAAATGGGGCATTTGCTGA
rJMFF027B15+ AGGGAGAGACCCGAGAGATGAAGGCTAAGTTGGAAGAAATGAAAATGGGGCATTTGTTGA
rJMFF027B04+ AGGGAGAGAACCGAGAGATGAAGGCTAAGTTGGAAGAAATGAAAATGGGGCATTTGCTGA
____________________________________________________________
consensus AGGGAGAGAACCGAGAGATGAAGGCTAAGTTGGAAGAAATGAAAATGGGGCATTTGCTGA
. : . : . : . : . : . :
rJMFF006A16+ GAACTGGTGGTTCTCATGGTCGGAGAGAAGAGAGTGTTGGGAAGAAGGTGGTTAGTCCAA
rJMFF027B15+ GAACTGGTGGTTCTCATGGTCGGAGAGAAGAGAGTGTTGGGAAGAAGGTGGTTAGTCCAA
rJMFF027B04+ GAACTGGTGGTTCTCATGGTCGGAGAGAAGAGAGTGTTGGGAAGAAGGTGGTTAGTCCAA
____________________________________________________________
consensus GAACTGGTGGTTCTCATGGTCGGAGAGAAGAGAGTGTTGGGAAGAAGGTGGTTAGTCCAA
. : . : . : . : . : . :
rJMFF006A16+ TTGTTGAGAGTTCGAGTGGTTTTGAGCAATGGAGGAACAAGAAGAATCCCGGGGGAGACG
rJMFF027B15+ TTGTTGAGAGTTCGAGTGGTTTTGAGCAATGGAGGAACAAGAAGAATCCCGGNGGAGCCG
rJMFF027B04+ TTGTTGAGAGTTCGAGTGGTTTTGAGCAATGGAGGAACAAGAAGAATCCCGGGGGAGACG
____________________________________________________________
consensus TTGTTGAGAGTTCGAGTGGTTTTGAGCAATGGAGGAACAAGAAGAATCCCGGGGGAGACG
. : . : . : . : . : . :
rJMFF006A16+ TTGTGAAGAAAGAGGCCAAGAAGAATGTGTCCAATGGAAACCGGGATGTCGAGAGTGAAT
rJMFF027B15+ TTGTGAAGAAAGAGGCCAAGAAGAATGTGTCCAATGGAAACCGGGATGTCGAGAGTGANT
rJMFF027B04+ TTGTGAAGAAAGAGGCCAAGAAGAATGTGTCCAATGGAAACCGGGATGTCGAGAGTGAAT
____________________________________________________________
consensus TTGTGAAGAAAGAGGCCAAGAAGAATGTGTCCAATGGAAACCGGGATGTCGAGAGTGAAT
. : . : . : . : . : . :
rJMFF006A16+ TGCAGAAAGCCATTGCAGCTGCTTCTTCTTCCCTCTGAGGTTAGAATTAGCTCCAGTAAC
rJMFF027B15+ TGCAGAAAGCCATTGCAGCTGCTTNTTCTTCCCTCTGAGGCTAGAATTAGCTCCAGTAAC
rJMFF027B04+ TGCAGAAAGCCATTGCAGCTGCTTCTTCTTCCCTCTGAGGTTAGAATTAGCTCCAGTAAC
____________________________________________________________
consensus TGCAGAAAGCCATTGCAGCTGCTTCTTCTTCCCTCTGAGGTTAGAATTAGCTCCAGTAAC
. : . : . : . : . : . :
rJMFF006A16+ TAACTAGTAAATATGCTCTGCTACTGTATATATGCCACTTGCTT
rJMFF027B15+ TAACTAGTAAATATGCTCTGCTACTGTATATATGCCACTTGCTT
rJMFF027B04+ TAACTAGTAAATATGCTCTGCTACTGTATATATGCCACTTGCTTTAAACTCAACTCAATT
____________________________________________________________
consensus TAACTAGTAAATATGCTCTGCTACTGTATATATGCCACTTGCTTTAAACTCAACTCAATT