Contig 004031:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025M10Sequence519000548 (2)emb|CDP19846.1|2e-54unnamed protein product [Coffea canephora]819004031 (2)ref|XP_002278821.1|237PREDICTED: uncharacterized protein LOC100240785 [Vitis vinifera] emb|CBI26581.3|
JMSF002A21Sequence360000548 (2)emb|CDP19846.1|2e-26unnamed protein product [Coffea canephora]784004031 (2)ref|XP_011076453.1|267PREDICTED: uncharacterized protein LOC105160671 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002A21+ AACTTTTTTGTCAGCTTTTGTTG
rJMFF025M10+ GGAGCTGTCCGTTCAACAACTTTTTNGTCAGCTTTTGTTG
                      ____________________________________________________________
consensus GGAGCTGTCCGTTCAACAACTTTTTTGTCAGCTTTTGTTG
 
. : . : . : . : . : . :
rJMSF002A21+ GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
rJMFF025M10+ GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
                      ____________________________________________________________
consensus GGATCTTTCAGGCAGTCATATGCTTGCATAGAAAGGTTGCAACGAAGGACCATAAGCTTG
 
. : . : . : . : . : . :
rJMSF002A21+ TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
rJMFF025M10+ TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
                      ____________________________________________________________
consensus TATATTGGGTTGCGGGAGGAGCATCTGGCCTCTCTGTGCTATTAGAGAAAAAAGCAAGAC
 
. : . : . : . : . : . :
rJMSF002A21+ GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
rJMFF025M10+ GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
                      ____________________________________________________________
consensus GTTCTGAGCTTGCCTTGTATGTTCTTCCACGAGCTGGGGAATCTTTATGGGGTATTCTAG
 
. : . : . : . : . : . :
rJMSF002A21+ TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
rJMFF025M10+ TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
                      ____________________________________________________________
consensus TAAATCGCCATTTGATGCCTGATGTCAAGAATACAGAGGTGGCCTTGTTCTGTGCTTGCA
 
. : . : . : . : . : . :
rJMSF002A21+ TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
rJMFF025M10+ TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
                      ____________________________________________________________
consensus TGGGGGGAATCATGTACTACCTGGAGCACGAACCAGACACGATGGCTCCATTCCTGAGGG
 
. : . : . : . : . : . :
rJMSF002A21+ GCCTGATTCGCCGATTCCTTGCCAGCAAAATTAGCAACCTTAGTCCTTCATCAAATAGGA
rJMFF025M10+ GCCTGATTCGCCGATTCCTTGCCAGC-AAATTAGCAACCTTAGTCCTTCATCAAATAGGA
                      ____________________________________________________________
consensus GCCTGATTCGCCGATTCCTTGCCAGCAAAATTAGCAACCTTAGTCCTTCATCAAATAGGA
 
. : . : . : . : . : . :
rJMSF002A21+ GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
rJMFF025M10+ GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
                      ____________________________________________________________
consensus GTGCATCTTATACATATCTGCAAGCTCTTGATGCCATGAAGAAACCAAAAGAAAATCAAG
 
. : . : . : . : . : . :
rJMSF002A21+ ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
rJMFF025M10+ ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
                      ____________________________________________________________
consensus ACGCTGAAACTTCAACTACAGAAAAATATAATCTTGAATCCATACCAGGACTCTGAGCTA
 
. : . : . : . : . : . :
rJMSF002A21+ TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
rJMFF025M10+ TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
                      ____________________________________________________________
consensus TATTCATGTTCGTAAACCCGGCCTGCAGCTCTATTTATATACTCCATATAATTTATAATC
 
. : . : . : . : . : . :
rJMSF002A21+ TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
rJMFF025M10+ TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
                      ____________________________________________________________
consensus TGTCACCGGCAGCAGCAGTGATGCTTAACCCATTCTCATTCAAAGAAAGAGGGTATCAAC
 
. : . : . : . : . : . :
rJMSF002A21+ AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
rJMFF025M10+ AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
                      ____________________________________________________________
consensus AACGACACCAGCGCCTCTTACCTTCCAGAACTGATGGCTCGTTTTGTTGTATTCTGATAG
 
. : . : . : . : . : . :
rJMSF002A21+ AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
rJMFF025M10+ AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
                      ____________________________________________________________
consensus AACGGTTGTTTTAACAGCTCAAGACTACGTACTTTACATGATTTATTCCTTCTTCTGACG
 
. : . : . : . : . : . :
rJMSF002A21+ TAGTACATTGTCTTTGGATAAAC
rJMFF025M10+ TAGTACATTGTCTTTGGATAAACAGGTATTGTTCATTAAAATGTTTGACTGTATACTAGT
                      ____________________________________________________________
consensus TAGTACATTGTCTTTGGATAAACAGGTATTGTTCATTAAAATGTTTGACTGTATACTAGT