Contig 004027:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024P10Sequence493011912 (5)ref|XP_008465521.1|2e-52PREDICTED: metal-nicotianamine transporter YSL1-like [Cucumis melo]676004027 (4)ref|XP_009762638.1|1e-105PREDICTED: metal-nicotianamine transporter YSL1-like isoform X3 [Nicotiana sylv
JMFS059A06Sequence635004027 (4)ref|XP_009587674.1|2e-101PREDICTED: metal-nicotianamine transporter YSL1-like isoform X1 [Nicotiana tome
JMFS059G08Sequence565004027 (4)ref|XP_009762638.1|3e-51PREDICTED: metal-nicotianamine transporter YSL1-like isoform X3 [Nicotiana sylv
JMSF008C14Sequence337011912 (5)ref|XP_010658081.1|2e-21PREDICTED: YS1-like protein-like isoform X1 [Vitis vinifera]772004027 (4)ref|XP_009587676.1|2e-119PREDICTED: metal-nicotianamine transporter YSL1-like isoform X2 [Nicotiana tome

Alignment

This contig is upended


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JMFS059A06-                                                           CTACGGCAAACT
rJMSF008C14+                                                           TACGGCAAACT
                      ____________________________________________________________
consensus                                                             CTACGGCAAACT
 
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JMFS059A06-           TGGGCTGTTCATGATGGCGGCGATGGCCGGAAAACAGCACGGCGTGGTGGCGGGACTCGC
rJMSF008C14+          TGGGCTGTTCATGATGGCGGCGATGGCCGGAAAACAGCACGGCGTGGTGGCGGGACTCGC
                      ____________________________________________________________
consensus             TGGGCTGTTCATGATGGCGGCGATGGCCGGAAAACAGCACGGCGTGGTGGCGGGACTCGC
 
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JMFS059A06-           CGGCTGCGGCTTGGTCAAGTCCATCGCTAATGTCTCCTGCAATTTAATGCAGGATTTCAA
rJMSF008C14+          CGGCTGCGGCTTGGTCAAGTCCATCGCTAATGTCTCCTGCAATTTAATGCAGGATTTCAA
                      ____________________________________________________________
consensus             CGGCTGCGGCTTGGTCAAGTCCATCGCTAATGTCTCCTGCAATTTAATGCAGGATTTCAA
 
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JMFS059G08-                                      CAGGGCCATGTTCCTGAGCCAGGCCATCGTCAC
JMFS059A06-           GACGGGCCATCTCACTATGACCTCTCCCAGGGCCATGTTTCTGAGCCAGGCCATCGGCAC
rJMSF008C14+          GACGGGCCATCTCACTATGACCTCTCCCAGGGCCATGTTTCTGAGCCAGGCCATCGGCAC
rJMFF024P10+                                     CAGGGCCATGTTTCTGAGCCAGGCCATCGGCAC
                      ____________________________________________________________
consensus             GACGGGCCATCTCACTATGACCTCTCCCAGGGCCATGTTTCTGAGCCAGGCCATCGGCAC
 
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JMFS059G08-           CGTAGCATCGGCTGCGTGGTGGCGCCCATCAGCTCCTTCCTGTTCTACACGGCGATCGAC
JMFS059A06-           CGTG--ATCGGCTGCGTGGTGGCGCCGCTCAGCTTCTTCCTGTTCTACACGGCGTTCGAC
rJMSF008C14+          CGTG--ATCGGCTGCGTGGTGGCGCCGCTCAGCTTCTTCCTGTTCTACACGGCGTTCGAC
rJMFF024P10+          CGTG--ATCGGCTGCGTGGTGGCGCCGCTCAGCTTCTTCCTGTTCTACACGGCGTTCGAC
                      ____________________________________________________________
consensus             CGTG--ATCGGCTGCGTGGTGGCGCCGCTCAGCTTCTTCCTGTTCTACACGGCGTTCGAC
 
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JMFS059G08-           ATCGGAAACCCCGCCAGACAGTACACGGCGCCGTACGCGCTCATTTACAGAAACATGGCG
JMFS059A06-           ATCGGAAACCCCGCCGGAGAGTTCAAGGCGCCGTACGCGCTCATTTACAGAAACATGGCG
rJMSF008C14+          ATCGGAAACCCCGCCGGAGAGTTCAAGGCGCCGTACGCGCTCATTTACAGAAACATGGCG
rJMFF024P10+          ATCGGAAACCCCGCCGGAGAGTTCAAGGCGCCGTACGCGCTCATTTACAGAAACATGGCG
                      ____________________________________________________________
consensus             ATCGGAAACCCCGCCGGAGAGTTCAAGGCGCCGTACGCGCTCATTTACAGAAACATGGCG
 
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JMFS059G08-           ATTCTCATCGTGAAAGGCCCATCGGCTTTGACCAAACACTGCTTGCAGATCTGGTACGGC
JMFS059A06-           ATTCTCAGCGTGGAAGGCGTCTCGGCTTTGCCCAAACACTGCTTGCAGCTCTGCTACGGC
rJMSF008C14+          ATTCTCAGCGTGGAAGGCGTCTCGGCTTTGCCCAAACACTGCTTGCAGCTCTGCTACGGC
rJMFF024P10+          ATTCTCAGCGTGGAAGGCGTCTCGGCTTTGCCCAAACACTGCTTGCAGCTCTGCTACGGC
                      ____________________________________________________________
consensus             ATTCTCAGCGTGGAAGGCGTCTCGGCTTTGCCCAAACACTGCTTGCAGCTCTGCTACGGC
 
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JMFS059G08-           TTCTTCGGCTTCTGCATTGTCGTCAACTTCGTCAAGGACCTTTCCCCGCCGAGGATCAAG
JMFS059A06-           TTCTTCGGCTTCGCCATTGTCGTCAACTTCGTCAAGGACCTTTCCCCGCCGAGGATCAAG
rJMSF008C14+          TTCTTCGGCTTCGCCATTGTCGTCAACTTCGTCAAGGACCTTTCCCCGCCGAGGATCAAG
rJMFF024P10+          TTCTTCGGCTTCGCCATTGTCGTCAACTTCGTCAAGGACCTTTCCCCGCCGAGGATCAAG
                      ____________________________________________________________
consensus             TTCTTCGGCTTCGCCATTGTCGTCAACTTCGTCAAGGACCTTTCCCCGCCGAGGATCAAG
 
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JMFS059G08-           AAATTTATGCCGCTCCCCATGGCGATGGCGGTGCCGTTCCTCATCGGAGGCTACTTCGCC
JMFS059A06-           AAATTTATGCCGCTCCCCATGGCGATGGCGGTGCCGTTCCTCATCGGAGGCTACTTCGCC
rJMSF008C14+          AAATTTATGCCGCTCCCCATGGCGATGGCGGTGCCGTTCCTCATCGGAGGCTACTTCGCC
rJMFF024P10+          AAATTTATGCCGCTCCCCATGGCGATGGCGGTGCCGTTCCTCATCGGAGGCTACTTCGCC
                      ____________________________________________________________
consensus             AAATTTATGCCGCTCCCCATGGCGATGGCGGTGCCGTTCCTCATCGGAGGCTACTTCGCC
 
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JMFS059G08-           GCAGATATGTGTGTTGGGAGTTTGGCTGTGTTCTTGTGGCAGAAACTGAACGCCGTGAAG
JMFS059A06-           GTAGATATGTGTGTTGGGAGTTTGGCTGTGTTCTTGTGGCAGAAACTGAACGCCGTGAAG
rJMSF008C14+          GTAGATATGTGTGTTGGGAGTTTGGCTGTGTTCTTGTGGCAGAAACTGAACGCCGTGAAG
rJMFF024P10+          GTAGATATGTGTGTTGGGAGTTTGGCTGTGTTCTTGTGGCAGAAACTGAACGCCGTGAAG
                      ____________________________________________________________
consensus             GTAGATATGTGTGTTGGGAGTTTGGCTGTGTTCTTGTGGCAGAAACTGAACGCCGTGAAG
 
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JMFS059G08-           GCGGAAGTTATGGTTCCGGCGGTGGCGGCGGAGATGATCT                    
JMFS059A06-           GCGGAAGTTATGGTTCCGGCGGTGGCGGCGGNGATGATCTGTGGAGAGGGTTTGTGGATT
rJMSF008C14+          GCGGAAGTTATGGTTCCGGCGGTGGCGGCGGGGATGATCTGTGGAGAGGGTTTGTGGATT
rJMFF024P10+          GCGGAAGTTATGGTTCCGGCGGTGGCGGCGGGGATGATCTGTGGAGAGGGTTTGTGGATT
                      ____________________________________________________________
consensus             GCGGAAGTTATGGTTCCGGCGGTGGCGGCGGGGATGATCTGTGGAGAGGGTTTGTGGATT
 
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JMFS059A06-           CTCCCGGCGTCGATTCTTGCCTTGG                                   
rJMSF008C14+          CTCCCGGCGTCGATTCTTGCCTTGGCCAAAATCAGTCCCCCTATTTGCATGAAGTTCTTG
rJMFF024P10+          CTCCCGGCGTCGATTCTTGCCTTGGCCAAAATCAGTCCCCCTATTTGCATGAAGTTCTTG
                      ____________________________________________________________
consensus             CTCCCGGCGTCGATTCTTGCCTTGGCCAAAATCAGTCCCCCTATTTGCATGAAGTTCTTG
 
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rJMSF008C14+          CCTTCTTGAAAGAGTCTTGATTTTTAAGGGTTTAGAAATATAGGATGTTAGAGTAACAAA
rJMFF024P10+          CCTTCTTGAAAGAGTCTTGATTTTTAAGGGTTTAGAAATATAGGATGTTAGAGTAACAAA
                      ____________________________________________________________
consensus             CCTTCTTGAAAGAGTCTTGATTTTTAAGGGTTTAGAAATATAGGATGTTAGAGTAACAAA
 
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rJMSF008C14+          TGTTAATAGAGTTGAATCCGCAGGACTAGCGCAGCTCATCCCA                 
rJMFF024P10+          TGTTAATAGAGTTGAATCCGCAGGACTAGCGCAGCTCATCCCATATACCACATTTTATTA
                      ____________________________________________________________
consensus             TGTTAATAGAGTTGAATCCGCAGGACTAGCGCAGCTCATCCCATATACCACATTTTATTA