Contig 004013:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021L12Sequence431000116 (3)ref|XP_009774026.1|7e-37PREDICTED: LOW QUALITY PROTEIN: metal transporter Nramp6-like [Nicotiana sylves613004013 (3)emb|CDO98224.1|1e-59unnamed protein product [Coffea canephora]
JMSF020F19Sequence723000116 (3)ref|XP_011082369.1|9e-95PREDICTED: metal transporter Nramp6-like isoform X4 [Sesamum indicum]740004013 (3)ref|XP_011082362.1|5e-81PREDICTED: metal transporter Nramp1-like isoform X3 [Sesamum indicum]
JMSF032C10Sequence697000116 (3)ref|XP_009594426.1|3e-90PREDICTED: LOW QUALITY PROTEIN: metal transporter Nramp6-like [Nicotiana toment770004013 (3)ref|XP_011082362.1|3e-77PREDICTED: metal transporter Nramp1-like isoform X3 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF032C10+ AGTTCC
                      ____________________________________________________________
consensus AGTTCC
 
. : . : . : . : . : . :
rJMSF020F19+ ATTGCGTTGCTAGCATCAGGACAGAGTTCTACCATAACGGGGACTTAC
rJMSF032C10+ NAGCTCTTTGCGATTGCGTTGCTAGCATCAGGACAGAGTTCTACCATAACGGGGACTTAC
                      ____________________________________________________________
consensus NAGCTCTTTGCGATTGCGTTGCTAGCATCAGGACAGAGTTCTACCATAACGGGGACTTAC
 
. : . : . : . : . : . :
rJMSF020F19+ GCTGGGCAATACGTTATGCAGGGTTTTCTTGATTTAAGGTTGAAGCCTTGGATTAGGAAC
rJMSF032C10+ GCTGGGCAATACGTTATGCAGGGTTTTCTTGATTTAAGGTTGAAGCCTTGGATTAGGAAC
                      ____________________________________________________________
consensus GCTGGGCAATACGTTATGCAGGGTTTTCTTGATTTAAGGTTGAAGCCTTGGATTAGGAAC
 
. : . : . : . : . : . :
rJMSF020F19+ ATGCTTACTCGGGGCTTAGCCATCGTTCCAAGTCTAATTGTTTCAATTATCGGTGGCTCT
rJMSF032C10+ ATGCTTACTCGGGGCTTAGCCATCGTTCCAAGTCTAATTGTTTCAATTATCGGTGGCTCT
rJMFF021L12+ TATCTGTGGCTCT
                      ____________________________________________________________
consensus ATGCTTACTCGGGGCTTAGCCATCGTTCCAAGTCTAATTGTTTCAATTATCGGTGGCTCT
 
. : . : . : . : . : . :
rJMSF020F19+ GCTGGGGCTGGAAATTTAATCATTATTGCATCGATGATCTTATCATTTGAACTCCCCTTT
rJMSF032C10+ GCTGGGGCTGGAAATTTAATCATTATTGCATCGATGATCTTATCATTTGAACTCCCCTTT
rJMFF021L12+ GCTGGGGCTGGAAATTTAATCATTATTGCATCGATGATCTTATCATTTGAACTCCCCTTT
                      ____________________________________________________________
consensus GCTGGGGCTGGAAATTTAATCATTATTGCATCGATGATCTTATCATTTGAACTCCCCTTT
 
. : . : . : . : . : . :
rJMSF020F19+ GCTCTCATTCCGTTGCTCAAATTCACGAGCAGCAAAACCAAGATGGGTGTACACGCCAAC
rJMSF032C10+ GCTCTCATTCCGTTGCTCAAATTCACGAGCAGCAAAACCAAGATGGGTGTACACGCCAAC
rJMFF021L12+ GCTCTCATTCCGTTGCTCAAATTCACGAGCAGCAAAACCAAGATGGGTGTACACGCCAAC
                      ____________________________________________________________
consensus GCTCTCATTCCGTTGCTCAAATTCACGAGCAGCAAAACCAAGATGGGTGTACACGCCAAC
 
. : . : . : . : . : . :
rJMSF020F19+ TCAAAAATAATTTCTGCGATCACTTGGATAATCGGGTCATTGATCATGGGAATCAACATC
rJMSF032C10+ TCAAAAATAATTTCTGCGATCACTTGGATAATCGGGTCATTGATCATGGGAATCAACATC
rJMFF021L12+ TCAAAAATAATTTCTGCGATCACTTGGATAATCGGGTCATTGATCATGGGAATCAACATC
                      ____________________________________________________________
consensus TCAAAAATAATTTCTGCGATCACTTGGATAATCGGGTCATTGATCATGGGAATCAACATC
 
. : . : . : . : . : . :
rJMSF020F19+ TATTACCTTGCAGAGAAGTTAGTTACTTCCCTCAAGAACAGTGATTTGAAGATGGTGGGC
rJMSF032C10+ TATTACCTTGCAGAGAAGTTAGTTACTTCCCTCAAGAACAGTGATTTGAAGATGGTGGGC
rJMFF021L12+ TATTACCTTGCAGAGAAGTTAGTTACTTCCCTCAAGAACAGTGATTTGAAGATGGTGGGC
                      ____________________________________________________________
consensus TATTACCTTGCAGAGAAGTTAGTTACTTCCCTCAAGAACAGTGATTTGAAGATGGTGGGC
 
. : . : . : . : . : . :
rJMSF020F19+ AAGGTGTTGTGTGGAATCTTGGGGTTCACGGGATTGTTGGTCTACTTGGGAAGCATCGCA
rJMSF032C10+ AAGGTGTTGTGTGGAATCTTGGGGTTCACGGGATTGTTGGTCTACTTGGGAAGCATCGCA
rJMFF021L12+ AAGGTGTTGTGTGGAATCTTGGGGTTCACGGGATTGTTGGTCTACTTGGGAAGCATCGCA
                      ____________________________________________________________
consensus AAGGTGTTGTGTGGAATCTTGGGGTTCACGGGATTGTTGGTCTACTTGGGAAGCATCGCA
 
. : . : . : . : . : . :
rJMSF020F19+ TACCTAGTCATCCGAAAAAACAAGGAACGCACCCACCTTCTCGCACTCGCTGCCGTCGAT
rJMSF032C10+ TACCTAGTCATCCGAAAAAACAAGGAACGCACCCACCTTCTCGCACTCGCTGCCGTCGAT
rJMFF021L12+ TACCTAGTCATCCGAAAAAACAAGGAACGCACCCACCTTCTCGCACTCGCTGCCGTCGAT
                      ____________________________________________________________
consensus TACCTAGTCATCCGAAAAAACAAGGAACGCACCCACCTTCTCGCACTCGCTGCCGTCGAT
 
. : . : . : . : . : . :
rJMSF020F19+ GGGTCACCAAACGGCAACGAGCCAAGTCTACCCCGAGAGGACATTCGGAGCATGCAACTG
rJMSF032C10+ GGGTCACCAAACGGCAACGAGCCAAGTCTACCCCGAGAGGACATTCGGAGCATGCAACTG
rJMFF021L12+ GGGTCACCAAACGGCAACGAGCCAAGTCTACCCCGAGAGGACATTCGGAGCATGCAACTG
                      ____________________________________________________________
consensus GGGTCACCAAACGGCAACGAGCCAAGTCTACCCCGAGAGGACATTCGGAGCATGCAACTG
 
. : . : . : . : . : . :
rJMSF020F19+ CCGGAGAAGAGGTCTACTTTAGATGTGGAGTGAAGGAGTGATAGTATAGGTCGGAAGATA
rJMSF032C10+ CCGGAGAAGAGGTCTACTTTAGATGTGGAGTGAAGGAGTGATAGTATAGGTCGGAAGATA
rJMFF021L12+ CCGGAGAAGAGGTCTACTTTAGATGTGGAGTGAAGGAGTGATAGTATAGGTCGGAAGATA
                      ____________________________________________________________
consensus CCGGAGAAGAGGTCTACTTTAGATGTGGAGTGAAGGAGTGATAGTATAGGTCGGAAGATA
 
. : . : . : . : . : . :
rJMSF020F19+ TAAATGACAACCTAACTAGGTGGAAATACAGGTAGCAACATGGATAGTGGTTGGTGTTTT
rJMSF032C10+ TAAATGACAACCTAACTAGGTGGAAATAGAGGTAGCAACATGGATAGTGGTTGGTGTTTT
rJMFF021L12+ TAAATGACAACCTAACTAGGTGGAAATAGAGGTAGCAACATGGATAGTGGTTGGTGTTTT
                      ____________________________________________________________
consensus TAAATGACAACCTAACTAGGTGGAAATAGAGGTAGCAACATGGATAGTGGTTGGTGTTTT
 
. : . : . : . : . : . :
rJMSF020F19+ CTTTCCATTTTGATGTTAAGGTTTTAGATATC
rJMSF032C10+ CTTTCCATTTTGATGTTAAGGTTTTAGATATC
rJMFF021L12+ CTTTCCATTTTGATGTTAAGGTTTTAGATATCATAAGCTGTACGTGTGTGACGTGCTATT
                      ____________________________________________________________
consensus CTTTCCATTTTGATGTTAAGGTTTTAGATATCATAAGCTGTACGTGTGTGACGTGCTATT