Contig 003980:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013M19Sequence587003117 (2)gb|EYU38040.1|4e-74hypothetical protein MIMGU_mgv1a009112mg [Erythranthe guttata] gb|EYU38041.1| hy613003980 (2)ref|XP_006486579.1|2e-53PREDICTED: CMP-sialic acid transporter 4-like isoform X2 [Citrus sinensis]
JMFF032E23Sequence592003117 (2)gb|EYU38040.1|1e-75hypothetical protein MIMGU_mgv1a009112mg [Erythranthe guttata] gb|EYU38041.1| hy617003980 (2)ref|XP_006486579.1|6e-46PREDICTED: CMP-sialic acid transporter 4-like isoform X2 [Citrus sinensis]

Alignment

This contig is upended


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rJMFF032E23+                                                     GTNTTTGGGATGATCTT
rJMFF013M19+                                                         TTGGGATGATNTT
                      ____________________________________________________________
consensus                                                        GTNTTTGGGATGATCTT
 
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rJMFF032E23+          CAATGCCATTGCAATAGTCATTCAAGATTTTGATCAAGTCGTGAACAAGGGTTTNTTTCA
rJMFF013M19+          CAATGCCATTGCAATAGTCATTCAAGATTTTGATCAAGTCGTGAACAAGGGTTTCTTTCA
                      ____________________________________________________________
consensus             CAATGCCATTGCAATAGTCATTCAAGATTTTGATCAAGTCGTGAACAAGGGTTTCTTTCA
 
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rJMFF032E23+          TGGATATTCATTGATTACAGTTNTCATGATTNTCAACCATGCACTAAGTGGTATAGCTGT
rJMFF013M19+          TGGATATTCATTGATTACAGTTNTCATGATTCTCAACCATGCACTAAGTGGTATAGCTGT
                      ____________________________________________________________
consensus             TGGATATTCATTGATTACAGTTNTCATGATTCTCAACCATGCACTAAGTGGTATAGCTGT
 
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rJMFF032E23+          ATCAATGGTAATGAAGTACGCAGACAATATTGTGAAGGTGTATGCTACATNTGTTGCAAT
rJMFF013M19+          ATCAATGGTAATGAAGTACGCAGACAATATTGTGAAGGTGTATGCTACATNTGTTGCAAT
                      ____________________________________________________________
consensus             ATCAATGGTAATGAAGTACGCAGACAATATTGTGAAGGTGTATGCTACATNTGTTGCAAT
 
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rJMFF032E23+          GCTGCTAACAGCTGTTGTATCTGTGTTCCTTTTCGGATTTCATCTTTCTCTCGCGTTCTT
rJMFF013M19+          GCTGCTAACAGCTGTTGTATCTGTGTTCCTTTTCGGATTTCATCTTTCTCTCGCGTTCTT
                      ____________________________________________________________
consensus             GCTGCTAACAGCTGTTGTATCTGTGTTCCTTTTCGGATTTCATCTTTCTCTCGCGTTCTT
 
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rJMFF032E23+          TNTTGGATCAACTGTTGTATCTGTCTCGGNGTATTTACNCTNTGCAGGAAAGCTCCAGAG
rJMFF013M19+          TCTTGGATCAACTGTTGTATCTGTCTCGGNGTATTTACACTNTGCAGGAAAGCTCCAGAG
                      ____________________________________________________________
consensus             TCTTGGATCAACTGTTGTATCTGTCTCGGNGTATTTACACTNTGCAGGAAAGCTCCAGAG
 
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rJMFF032E23+          GTAGCGGTACAATATTCCTTCACCCAACTNTTCCCGCTATTGTTTCATTNTTTTCCCCNC
rJMFF013M19+          GTAGCGGTACAATATTCCTTCACCCAACTNTTCCCGCTATTGTTTCATTNTTTTCCCCAC
                      ____________________________________________________________
consensus             GTAGCGGTACAATATTCCTTCACCCAACTNTTCCCGCTATTGTTTCATTNTTTTCCCCAC
 
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rJMFF032E23+          CCCAACTCCAGAATTGTTACTCGAAAGTTTAGATTCATTGTTGATGCAGAGATGAACGTT
rJMFF013M19+          CCCAACTCCAGAATTGTTACTCGAAAGTTTAGATTCATTGTTGATGCAGAGATGAACGTT
                      ____________________________________________________________
consensus             CCCAACTCCAGAATTGTTACTCGAAAGTTTAGATTCATTGTTGATGCAGAGATGAACGTT
 
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rJMFF032E23+          TTCTTGATGGACCGTTGCGGTNTGCAAGAAATTTTTTTTTTTTAATGATTTCGACAAGAT
rJMFF013M19+          TTNTTGATGGACCGTTGCGGTNTGCAAGAAATTTTTTTTTTTTAATGATTTCGACAAGAT
                      ____________________________________________________________
consensus             TTCTTGATGGACCGTTGCGGTNTGCAAGAAATTTTTTTTTTTTAATGATTTCGACAAGAT
 
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rJMFF032E23+          TATGCTAATAGCAATCCAATGATTATGCACATGGAATTAAACAGGCTCATTACTATACCC
rJMFF013M19+          TATGCTAATAGCAATCCAATGATTATGCACATGGAATTAAACAGGCTCATTACTATACCC
                      ____________________________________________________________
consensus             TATGCTAATAGCAATCCAATGATTATGCACATGGAATTAAACAGGCTCATTACTATACCC
 
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rJMFF032E23+          CGAGAATTATTATACGATACATCTTAGTTTGTTGTACTATTAATGAGAGACAATCAGGCA
rJMFF013M19+          CGAGAATTATTATACGATACATCTTAGTTTGTTGTACTATTAATGAGAGACAATCAGGCA
                      ____________________________________________________________
consensus             CGAGAATTATTATACGATACATCTTAGTTTGTTGTACTATTAATGAGAGACAATCAGGCA