Contig 003948: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMFF006M17- AGCTGACCTCCAAAATATATTTGGAGTAGCAAAGTAGCTCGATCGACACTAAACCCT
JMSF052P14- GACACTAAACCCT
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consensus AGCTGACCTCCAAAATATATTTGGAGTAGCAAAGTAGCTCGATCGACACTAAACCCT
. : . : . : . : . : . :
JMFF006M17- AGCATTCGCCGCGAGGCAGGAATCTTCAACAATGGAGAGGAAGGAAAAGAAGAAGAAGCT
JMSF052P14- AGCATTCGCCGCGAGGCAGGAATCTTCAACAATGGAGAGGAAGGAAAAGAAGAAGAAGCT
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consensus AGCATTCGCCGCGAGGCAGGAATCTTCAACAATGGAGAGGAAGGAAAAGAAGAAGAAGCT
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JMFF006M17- GGATGTGGAAAACCCTATACCATATGAAGAAGCTGAAAACGAGAAGCAGAAAGGAGAGGA
JMSF052P14- GGATGTGGAAAACCCTATACCATATGAAGAAGCTGAAAACGAGAAGCAGAAAGGAGAGGA
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consensus GGATGTGGAAAACCCTATACCATATGAAGAAGCTGAAAACGAGAAGCAGAAAGGAGAGGA
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JMFF006M17- GGAGACGCTGACTGTGAAGATGCAAACTTTGAGCTCAGACCCAGATAAAATCTCCCCGAT
JMSF052P14- GGAGACGCTGACTGTGAAGATGCAAACTTTGAGCTCAGACCCAGATAAAATCTCCCCGAT
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consensus GGAGACGCTGACTGTGAAGATGCAAACTTTGAGCTCAGACCCAGATAAAATCTCCCCGAT
. : . : . : . : . : . :
JMFF006M17- TGTCGGGTACTTTGCGTCCGGTTCCGATCCGTTTACAAAAAATTCTGCCGAGCAATCGGA
JMSF052P14- TGTCGGGTACTTTGCGTCCGGTTCCGATCCGTTTACAAAAAATTCTGCCGAGCAATCGGA
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consensus TGTCGGGTACTTTGCGTCCGGTTCCGATCCGTTTACAAAAAATTCTGCCGAGCAATCGGA
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JMFF006M17- TGCCACGGTCAGGGTTTACAGACATACAAAAAGGAGTAATAGGTTACAGCTCGCCGTGAG
JMSF052P14- TGCCACGGTCAGGGTTTACAGACATACAAAAAGGAGTAATAGGTTACAGCTCGCCGTGAG
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consensus TGCCACGGTCAGGGTTTACAGACATACAAAAAGGAGTAATAGGTTACAGCTCGCCGTGAG
. : . : . : . : . : . :
JMFF006M17- CCAGAATGACTCCCCGGTGGATTTCGTTGGGACGAATTATTCCGGCGAGGCTACGGCTCC
JMSF052P14- CCAGAATGACTCCCCGGTGGATTTCGTTGGGACGAATTATTCCGGCGAGGCTACGGCTCC
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consensus CCAGAATGACTCCCCGGTGGATTTCGTTGGGACGAATTATTCCGGCGAGGCTACGGCTCC
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JMFF006M17- TCAGCTCTGTAATTACGCGATTGGAGTGTTGGACAAGGAGACCCAAACGCTTAAGATTGT
JMSF052P14- TCAGCTCTGTAATTACGCGATTGGAGTGTTGGACAAGGAGACCCAAACGCTTAAGATTGT
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consensus TCAGCTCTGTAATTACGCGATTGGAGTGTTGGACAAGGAGACCCAAACGCTTAAGATTGT
. : . : . : . : . : . :
JMFF006M17- TCCTATTGCTGGAAACAAGG
JMSF052P14- TCCTATTGCTGGAAACAAGGTTATTAGATTGGATCCTAAGGTTGCAGGAGTTGACATACC
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consensus TCCTATTGCTGGAAACAAGGTTATTAGATTGGATCCTAAGGTTGCAGGAGTTGACATACC
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JMSF052P14- AGAAGATGAAAATATGGATAAGAAACAGCTCACTGCAGAGGAAAAGGCTCTCAAAACCAG
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consensus AGAAGATGAAAATATGGATAAGAAACAGCTCACTGCAGAGGAAAAGGCTCTCAAAACCAG
. : . : . : . : . : . :
JMSF052P14- AGCTTTAACTGAAATGTACTCTAACAAGAAATCTATTCGAAAGGCTAAGAAACTTGATAC
rJMSF052P14+ GGCTAAGAAACTTGATAC
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consensus AGCTTTAACTGAAATGTACTCTAACAAGAAATCTATTCGAAAGGCTAAGAAACTTGATAC
. : . : . : . : . : . :
JMSF052P14- TTTGCGGGAACAAGCAAATGCCGGTGCCGAGCATGTTGAAGGGAACGAGCTCATA
rJMSF052P14+ TTTGCGGGAACAAGCAAATGCCGGTGCCGAGCATGTTGAAGGGAACGAGCTCATAAATCA
rJMFF006M17+ CCGGTGCCGAGCATGTTGAAGGGAACGAGCTCATAAATCA
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consensus TTTGCGGGAACAAGCAAATGCCGGTGCCGAGCATGTTGAAGGGAACGAGCTCATAAATCA
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rJMSF052P14+ AGAAGCTCTTAACGTTGCCATCGCCACC-GCAACAGATGGTGGTGGCCGCAATATCCCAC
rJMFF006M17+ AGAAGCTCTTAACGTTGCCATCGCCACCGGCANCAGATGGTGGTGGCCGCAATATCCCAC
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consensus AGAAGCTCTTAACGTTGCCATCGCCACCGGCAACAGATGGTGGTGGCCGCAATATCCCAC
. : . : . : . : . : . :
rJMSF052P14+ CACATGATTTGGATGCCACTACACCTCAGGCAGCATATCCACTGGACAAGATTATTGCCA
rJMFF006M17+ CACATGATTTGGATGCCACTACACCTNAGGCAGCATATCCACTGGACAAGATTATTGCCA
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consensus CACATGATTTGGATGCCACTACACCTCAGGCAGCATATCCACTGGACAAGATTATTGCCA
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rJMSF052P14+ AGGGAGAGTGGGATTATCTCTCAGATATCTTTGATGTTTTGGAAACTGGAGAGCGCATTC
rJMFF006M17+ AGGGAGAGTGGGATTATCTCTCAGATATCTTTGATGTTTTGGAAACTGGAGAGCGCATTC
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consensus AGGGAGAGTGGGATTATCTCTCAGATATCTTTGATGTTTTGGAAACTGGAGAGCGCATTC
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rJMSF052P14+ CACTTGATGCTTTTCCAAGCTTTGTATGCAACAGAACGTATAAATTGGCAGATATTAAGG
rJMFF006M17+ CACTTGATGCTTTTCCAAGCTTTGTATGCAACAGAACGTATAAATTGGCAGATATTAAGG
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consensus CACTTGATGCTTTTCCAAGCTTTGTATGCAACAGAACGTATAAATTGGCAGATATTAAGG
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rJMSF052P14+ ATGAGACACAGAAGCGAAGAATGGCTGGGATTTTTTCATACATTACTCATCTTGTTAAGT
rJMFF006M17+ ATGAGACACAGAAGCGAAGAATGGCTGGGATTTTTTCATACATTACTCATCTTGTTAAGT
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consensus ATGAGACACAGAAGCGAAGAATGGCTGGGATTTTTTCATACATTACTCATCTTGTTAAGT
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rJMSF052P14+ TCAAGGATAAGCATTCTATGGATGGCTTTTCTTCTGCAAAGCATCACAAAATTCCAGGCA
rJMFF006M17+ TCAAGGATAAGCATTCTATGGATGGCTTTTCTTCTGCAAAGCATCACAAAATTCCAGGCA
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consensus TCAAGGATAAGCATTCTATGGATGGCTTTTCTTCTGCAAAGCATCACAAAATTCCAGGCA
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rJMSF052P14+ TGTTAGTCCAGAAATTCTCGTCACTGTTTGGTGTTTCAGAGTCGAAGAGACTTCCTGCTG
rJMFF006M17+ TGTTAGTCCAGAAATTCTCGTCACTGTTTGGTGTTTCAGAGTCGAAGAGACTTCCTGCTG
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consensus TGTTAGTCCAGAAATTCTCGTCACTGTTTGGTGTTTCAGAGTCGAAGAGACTTCCTGCTG
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rJMSF052P14+ AAAAAATTGATCTCCTCATCAGTTACGTACTTGTTCTCACTTTATACGCTGACAATTTCC
rJMFF006M17+ AAAAAATTGATCTCCTCATCAGTTACGTACTTGTTCTCACTTTATACGCTGACAATTTCC
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consensus AAAAAATTGATCTCCTCATCAGTTACGTACTTGTTCTCACTTTATACGCTGACAATTTCC
. : . : . : . : . : . :
rJMSF052P14+ GAAGTGATCCATCAGACATAGCCAAAGATCTCAGAATGAGTGCTGGAGATTTAAGGCCTC
rJMFF006M17+ GAAGTGATCCATCAGACATAGCCAAAGATCTCAGAATGAGTGCTGGAGATTTAAGGCCTC
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consensus GAAGTGATCCATCAGACATAGCCAAAGATCTCAGAATGAGTGCTGGAGATTTAAGGCCTC
. : . : . : . : . : . :
rJMSF052P14+ GTTTGGAGTTACTGGGTTGCAAATTCGTTAAGGAGAAGCGAGCGTTTCTAGCCACACTCC
rJMFF006M17+ GTTTGGAGTTACTGGGTTGCAAATTCGTTAAGGAGAAGCGAGCGTTTCTAGCCACACTCC
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consensus GTTTGGAGTTACTGGGTTGCAAATTCGTTAAGGAGAAGCGAGCGTTTCTAGCCACACTCC
. : . : . : . : . : . :
rJMSF052P14+ CTGTCCCTCTGAAATTCACAACAAAAAGGAAAAGGCGAAAGTAAAGAAGCATTTGAATAT
rJMFF006M17+ CTGTCCCTCTGAAATTCACAACAAAAAGGAAAAGGCGAAAGTAAAGAAGCATTTGAATAT
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consensus CTGTCCCTCTGAAATTCACAACAAAAAGGAAAAGGCGAAAGTAAAGAAGCATTTGAATAT
. : . : . : . : . : . :
rJMSF052P14+ TTTTCTTGTGTTTTAAAAACCATAGCCAGTTTCAGGCATTTTTGTTTAGACATTTCTGCA
rJMFF006M17+ TTTTCTTGTGTTTTAAAAACCATAGCCAGTTTCAGGCATTTTTGTTTAGACATTTCTGCA
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consensus TTTTCTTGTGTTTTAAAAACCATAGCCAGTTTCAGGCATTTTTGTTTAGACATTTCTGCA
. : . : . : . : . : . :
rJMSF052P14+ TGTGACTGGGCAGCTTGTACTCCATCT
rJMFF006M17+ TGTGACTGGGCAGCTTGTACTCCATCTTATACAATCATGGTTTATTCTATCAATTTACAA
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consensus TGTGACTGGGCAGCTTGTACTCCATCTTATACAATCATGGTTTATTCTATCAATTTACAA