asagaodb

Contig 003947: Sequence
BLAST Hits against nr-aa DB Show

clone	5'-sequence						3'-sequence
clone	Seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFF006J10	Sequence	574	003947 (7)	ref\|XP_003550159.1\|	7e-69	PREDICTED: uncharacterized protein LOC100807125 isoform X1 [Glycine max]	744	003947 (7)	ref\|XP_003550159.1\|	6e-67	PREDICTED: uncharacterized protein LOC100807125 isoform X1 [Glycine max]
JMFN012N17	Sequence	609	003947 (7)	ref\|XP_003550159.1\|	4e-67	PREDICTED: uncharacterized protein LOC100807125 isoform X1 [Glycine max]
JMSF014J06	Sequence	559	003947 (7)	ref\|XP_006601125.1\|	1e-53	PREDICTED: uncharacterized protein LOC100807125 isoform X2 [Glycine max]	737	003947 (7)	ref\|XP_006601125.1\|	1e-52	PREDICTED: uncharacterized protein LOC100807125 isoform X2 [Glycine max]
JMSF022J06	Sequence						138	003947 (7)	ref\|XP_009401825.1\|	70.1	PREDICTED: uncharacterized protein LOC103985740 [Musa acuminata subsp. malaccen
JMSF042O16	Sequence	759	003947 (7)	ref\|XP_003550159.1\|	5e-68	PREDICTED: uncharacterized protein LOC100807125 isoform X1 [Glycine max]

Alignment

This contig is upended


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JMSF014J06-                                                                GTAGCAT
rJMSF014J06+                                                               GTAGCAT
JMFF006J10-                                                         GCAGACAGTAGCAT
JMSF042O16-                                           GGGTGGATCAGAAAGCAGACAGTAGCAT
                      ____________________________________________________________
consensus                                             GGGTGGATCAGAAAGCAGACAGTAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014J06-           GGCTGCCACGAACCTGGCAGTGCCCACCACATTCCGGCCGCCACAATTTACACCTACCAT
rJMSF014J06+          GGCTGCCACGAACCTGGCAGTGCCCACCACATTCCGGCCGCCACAATTTACACCTACCAT
JMFF006J10-           GGCTGCCACGAACCTGGCAGTGCCCACCACATTCCGGCCGCCACAATTTACACCTACCAT
JMSF042O16-           GGCTGCCACGAACCTGGCAGTGCCCACCACATTCCGGCCGCCACAATTTACACCTACCAT
rJMFF006J10+                                             GGCCGCCACAATTTACACCTACCAT
                      ____________________________________________________________
consensus             GGCTGCCACGAACCTGGCAGTGCCCACCACATTCCGGCCGCCACAATTTACACCTACCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014J06-           CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
rJMSF014J06+          CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
JMFF006J10-           CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
JMSF042O16-           CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
rJMFF006J10+          CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
                      ____________________________________________________________
consensus             CGCCGTTAACCACCGCAGACCCACCACCAGCACCACCAGAAAGAAACGCATTTCCATCTC
 
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JMSF014J06-           TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
rJMSF014J06+          TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
JMFF006J10-           TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
JMSF042O16-           TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
JMFN012N17+                                                 CTGAAAAGCCTCTAATCGAGCT
rJMFF006J10+          TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
                      ____________________________________________________________
consensus             TTGCACCGCGGCGTCGCTGGAATCTTCCTCGCCCACAACTGAAAAGCCTCTAATCGAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014J06-           AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
rJMSF022J06+                         AAAAGCAGAGGCGGATGGGAAGTANNCNGTCGATAANGNCGNGGC
rJMSF014J06+          AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
JMFF006J10-           AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
JMSF042O16-           AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
JMFN012N17+           AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
rJMFF006J10+          AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
                      ____________________________________________________________
consensus             AGAGTTCATAGGGCCAAAAGCAGAGGCGGATGGGAAGTACCCAGTCGATAAAGCCACGGC
 
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JMSF014J06-           AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
rJMSF022J06+          AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGTGGATAACAAGATTGAGCTCTACGC
rJMSF014J06+          AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
JMFF006J10-           AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
JMSF042O16-           AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
JMFN012N17+           AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
rJMFF006J10+          AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
                      ____________________________________________________________
consensus             AGTTAGTGGTGAGAAGCTTCTTAGGAATATAATGGCGGATAACAAGATTGAGCTTTACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014J06-           TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
rJMSF022J06+          TGCCTATGGGAAAGTGATGAATNGTGGAGGTGG                           
rJMSF014J06+          TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
JMFF006J10-           TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
JMSF042O16-           TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
JMFN012N17+           TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
rJMFF006J10+          TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
                      ____________________________________________________________
consensus             TGCCTATGGGAAAGTGATGAATTGTGGAGGTGGTGGAAGTTGTGGTACTTGTATTGTGGA
 
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JMSF014J06-           GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
rJMSF014J06+          GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
JMFF006J10-           GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
JMSF042O16-           GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
JMFN012N17+           GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
rJMFF006J10+          GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
                      ____________________________________________________________
consensus             GATTATAGATGGAAAAGATCTCTTAAACGAGAGGACAAATACAGAACTCCGATATCTAAA
 
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JMSF014J06-           GAAGAAAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
rJMSF014J06+          GAAGAAAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
JMFF006J10-           GAAG-AAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
JMSF042O16-           GAAG-AAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
JMFN012N17+           GAAG-AAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
rJMFF006J10+          GAAG-AAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
                      ____________________________________________________________
consensus             GAAG-AAACCAGAGTCATGGAGGCTAGCATGCCAGACAATAGTTGGAAATAAAGAGAACT
 
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JMSF014J06-           CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
rJMSF014J06+          CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
JMFF006J10-           CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
JMSF042O16-           CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
JMFN012N17+           CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
rJMFF006J10+          CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
                      ____________________________________________________________
consensus             CTGGCAAGGTAGTAGTCCAGAGGCTGCCTCAATGGAAGAAGTGAAAGCAAATAAAATACC
 
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JMSF014J06-           ATTCTGAAAA                                                  
rJMSF014J06+          ATTCTGAAAACAGCAAACAACCCAGTGAAGAAATTCAAAGAAACATAAATATACAACAAC
JMFF006J10-           ATTCTGAAA                                                   
JMSF042O16-           ATTCTGAAAACAGCAAACAACCCAGTGAAGAAATTCAAAGAAACATAAATATACAACAAC
JMFN012N17+           ATTCTGAAAACAGCAAACAACCCAGTGAAGAAATTCAAAGAAACATAAATATACAACAAC
rJMFF006J10+          ATTCTGAAAACAGCAAACAACCCAGTGAAGAAATTCAAAGAAACATAAATATACAACAAC
                      ____________________________________________________________
consensus             ATTCTGAAAACAGCAAACAACCCAGTGAAGAAATTCAAAGAAACATAAATATACAACAAC
 
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rJMSF014J06+          AACAACCCCCTCTCCCCATTGTGAGTAGTGAAATGTAGGAACCTATCTGCACTTGTACAC
JMSF042O16-           AACAACCCCCTCTCCCCATTGTGAGTAGTGAAATGTAGGAACCTATCTGCACTTGTACAC
JMFN012N17+           AACAACCCCCTCTCCCCATTGTGAGTAGTGAAATGTAGGAACCTATCTGCACTTGTACAC
rJMFF006J10+          AACAACCCCCTCTCCCCATTGTGAGTAGTGAAATGTAGGAACCTATCTGCACTTGTACAC
                      ____________________________________________________________
consensus             AACAACCCCCTCTCCCCATTGTGAGTAGTGAAATGTAGGAACCTATCTGCACTTGTACAC
 
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rJMSF014J06+          ATGAACTTGTTAACCATGCAACAATGTTCTTTTACTCAAAAAGGAAGCCAGAGTTCAATT
JMSF042O16-           ATGAACTTGTTAACCATGCAACAATGTTCTTTTACTCAAAAAGGAAGCCAGAGTTCAATT
JMFN012N17+           ATGAACTTGTTAACCATGCAACAATGTTCTTTTACTCAAAAAGGAAGCCAGAGTTCAATT
rJMFF006J10+          ATGAACTTGTTAACCATGCAACAATGTTCTTTTACTCAAAAAGGAAGCCAGAGTTCAATT
                      ____________________________________________________________
consensus             ATGAACTTGTTAACCATGCAACAATGTTCTTTTACTCAAAAAGGAAGCCAGAGTTCAATT
 
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rJMSF014J06+          TTAC                                                        
JMSF042O16-           TTAC                                                        
JMFN012N17+           TTAC                                                        
rJMFF006J10+          TTACACATTACACTTGTGTAATATACTAATATTATGTAAGAGTTTCTTCATCTCTATAAC
                      ____________________________________________________________
consensus             TTACACATTACACTTGTGTAATATACTAATATTATGTAAGAGTTTCTTCATCTCTATAAC

Contig 003947: SequenceBLAST Hits against nr-aa DB Show

Alignment

Contig 003947: Sequence
BLAST Hits against nr-aa DB Show