Contig 003934:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N07Sequence537003934 (2)ref|XP_009589931.1|2e-33PREDICTED: HMG-Y-related protein A-like [Nicotiana tomentosiformis]750003934 (2)ref|XP_009589931.1|1e-32PREDICTED: HMG-Y-related protein A-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002N07- CATTGGGGGGGATTGGATTTCTCCGGTGAG
                      ____________________________________________________________
consensus CATTGGGGGGGATTGGATTTCTCCGGTGAG
 
. : . : . : . : . : . :
rJMFF002N07- GTGAAGTACATCAACATGACGCCTAATCTACATCGATCCAACTCTAATAACTTAAACACG
                      ____________________________________________________________
consensus GTGAAGTACATCAACATGACGCCTAATCTACATCGATCCAACTCTAATAACTTAAACACG
 
. : . : . : . : . : . :
rJMFF002N07- TACACACAGACACCATTCCATTCCTACAATTAAAGCACGACAAATTAAAGCGATGAACAT
                      ____________________________________________________________
consensus TACACACAGACACCATTCCATTCCTACAATTAAAGCACGACAAATTAAAGCGATGAACAT
 
. : . : . : . : . : . :
JMFF002N07+ AGCTCATTTC
rJMFF002N07- CATAATCAGGTTTAGAGATGAATGGACCTTAGCTTCAAACTCAGCTAGCTAGCTCATTTC
                      ____________________________________________________________
consensus CATAATCAGGTTTAGAGATGAATGGACCTTAGCTTCAAACTCAGCTAGCTAGCTCATTTC
 
. : . : . : . : . : . :
JMFF002N07+ AAAGCCATTNTGGGGTGAGGGTGGCTGTGGCTTCACCTTCNTCGGGCGGCCCCGGGGCCT
rJMFF002N07- AAAGCCATTCTGGGGTGAGGGTGGCTGTGGCTTCACCTTCCTCGGGCGGCCCCGGGGCCT
                      ____________________________________________________________
consensus AAAGCCATTCTGGGGTGAGGGTGGCTGTGGCTTCACCTTCCTCGGGCGGCCCCGGGGCCT
 
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JMFF002N07+ GCCGGTTTTGGAGAGGGTGAGTGTGGAAGGGCCGGGAGAAGGCTTGGGCTTCTTGGGGAC
rJMFF002N07- GCCGGTTTTGGAGAGGGTGAGTGTGGAAGGGCCGGGAGAAGGCTTGGGCTTCTTGGGGAC
                      ____________________________________________________________
consensus GCCGGTTTTGGAGAGGGTGAGTGTGGAAGGGCCGGGAGAAGGCTTGGGCTTCTTGGGGAC
 
. : . : . : . : . : . :
JMFF002N07+ TGGTGGCGCGTTGGGGTCTTTTCTTGGCCGGCCACGCCCACGCTTAGGGGGAACACCTGG
rJMFF002N07- TGGTGGCGCGTTGGGGTCTTTTCTTGGCCGGCCACGCCCACGCTTAGGGGGAACACCTGG
                      ____________________________________________________________
consensus TGGTGGCGCGTTGGGGTCTTTTCTTGGCCGGCCACGCCCACGCTTAGGGGGAACACCTGG
 
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JMFF002N07+ GCCTGCCTTGATGTAATTGTTCTTCAAGAAAATCAGTTCACCGCTCTGCTTCATTCTGTC
rJMFF002N07- GCCTGCCTTGATGTAATTGTTCTTCAAGAAAATCAGTTCACCGCTCTGCTTCATTCTGTC
                      ____________________________________________________________
consensus GCCTGCCTTGATGTAATTGTTCTTCAAGAAAATCAGTTCACCGCTCTGCTTCATTCTGTC
 
. : . : . : . : . : . :
JMFF002N07+ CAAGTGGAAAGTTAGCAGCTTTGAGTGAGCAGAAGGCAATTCTCCATACTTGGATTCTAT
rJMFF002N07- CAAGTGGAAAGTTAGCAGCTTTGAGTGAGCAGAAGGCAATTCTCCATACTTGGATTCTAT
                      ____________________________________________________________
consensus CAAGTGGAAAGTTAGCAGCTTTGAGTGAGCAGAAGGCAATTCTCCATACTTGGATTCTAT
 
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JMFF002N07+ GTATCTTGATATTGATGTCTTGTTTGATCCTTCTTCTTGGTTCAGTGCATCAATAGCTTC
rJMFF002N07- GTATCTTGATATTGATGTCTTGTTTGATCCTTCTTCTTGGTTCAGTGCATCAATAGCTTC
                      ____________________________________________________________
consensus GTATCTTGATATTGATGTCTTGTTTGATCCTTCTTCTTGGTTCAGTGCATCAATAGCTTC
 
. : . : . : . : . : . :
JMFF002N07+ AATTATCATCTCTGGGTATTCAGGGTGCGATGGAGGCTTGTTGACGCGTTCAGACGCCAT
rJMFF002N07- AATTATCATCTCTGGGTATTCAGGGTGCGATGGAGGCTTGTTGACGCGTTCAGACGCCAT
                      ____________________________________________________________
consensus AATTATCATCTCTGGGTATTCAGGGTGCGATGGAGGCTTGTTGACGCGTTCAGACGCCAT
 
. : . : . : . : . : . :
JMFF002N07+ GGAGAAACTTCCTGCGCGCAGAGAGAGAGAGAGAGAGGAGGAGGAAGACGAAGAAGGCTT
rJMFF002N07- GGAGAAACTTCCTGCGCGCANAGAGAGAGAGAGAGAGGAGGAGGAAGACGAANAAGGCTT
                      ____________________________________________________________
consensus GGAGAAACTTCCTGCGCGCAGAGAGAGAGAGAGAGAGGAGGAGGAAGACGAAGAAGGCTT
 
. : . : . : . : . : . :
JMFF002N07+ TTGAGGAGTCCCCACAGAGAGAGGAGTGTCAGCTTGAAAAGTACAGC
rJMFF002N07- TTGANGAGTCCCCACANANAGAGGAGTGTCAGCTTGAAAAGTACAGCCGGTTCTCGACGA
                      ____________________________________________________________
consensus TTGAGGAGTCCCCACAGAGAGAGGAGTGTCAGCTTGAAAAGTACAGCCGGTTCTCGACGA