Contig 003929:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H22Sequence534007271 (9)ref|XP_004953107.1|2e-06PREDICTED: uncharacterized protein At4g06744-like [Setaria italica]783003929 (9)ref|XP_006360245.1|8e-17PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF008N24Sequence350007271 (9)730003929 (9)ref|XP_006360245.1|4e-25PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF017F04Sequence243007271 (9)709003929 (9)ref|XP_006360245.1|2e-38PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF017N19Sequence520007271 (9)ref|XP_009588943.1|4e-10PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]715003929 (9)ref|XP_006360245.1|1e-54PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF036O16Sequence677007271 (9)ref|XP_009588943.1|6e-34PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]709003929 (9)ref|XP_006360245.1|4e-51PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF037C16Sequence673007271 (9)ref|XP_009588943.1|5e-34PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]695003929 (9)ref|XP_006360245.1|6e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF042F11Sequence780007271 (9)ref|XP_009588943.1|2e-38PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]753003929 (9)ref|XP_006360245.1|8e-57PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF044I16Sequence746007271 (9)ref|XP_009588943.1|6e-36PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]698003929 (9)ref|XP_006360245.1|6e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF046P03Sequence720007271 (9)ref|XP_009588943.1|7e-43PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]681003929 (9)ref|XP_006360245.1|1e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044I16+ TCCTTA
rJMSF037C16+ TCCTTA
rJMSF046P03+ GTCTTCCTTA
rJMSF017N19+ CTCCGGTTGTCTTCCTTA
rJMSF036O16+ CTCCGGTTGTCTTCCTTA
rJMSF042F11+ CTTGAACAACAAACTCTCCGGTTGTCTTCCTTA
                      ____________________________________________________________
consensus CTTGAACAACAAACTCTCCGGTTGTCTTCCTTA
 
. : . : . : . : . : . :
rJMSF044I16+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
rJMSF037C16+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
rJMSF046P03+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
rJMSF017N19+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
rJMSF036O16+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTNGACGCCAGCATTAACCAATTGACAGG
rJMSF042F11+ CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
                      ____________________________________________________________
consensus CGAGATTGGGTTACTCAAAAACTCGACAGTTTTCGACGCCAGCATTAACCAATTGACAGG
 
. : . : . : . : . : . :
rJMSF044I16+ TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF037C16+ TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF046P03+ TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF017N19+ TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF036O16+ TCCCATTCCACAATCCTTTGGGTGCNTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF042F11+ TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMSF017F04+ CCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
rJMFF001H22+ CAA
                      ____________________________________________________________
consensus TCCCATTCCACAATCCTTTGGGTGCCTGGAAAAACTGGAGATTCTGAACCTGACAAACAA
 
. : . : . : . : . : . :
rJMSF044I16+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF037C16+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF046P03+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF017N19+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF036O16+ TCAGCTTTATGGGTCTG-TTCCAGAATCNTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF042F11+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF017F04+ TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMSF008N24+ GTTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
rJMFF001H22+ TCAGCTTTATGGGTCTGTTCCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
                      ____________________________________________________________
consensus TCAGCTTTATGGGTCTG-TTCCAGAATCTTTATGCAAGCTGAAAGATCTGGAGGAGCTGA
 
. : . : . : . : . : . :
rJMSF044I16+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF037C16+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF046P03+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF017N19+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF036O16+ GTNTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF042F11+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF017F04+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMSF008N24+ GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
rJMFF001H22+ GTTTGAGCGGCGACTATTTTACCCAGATTTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
                      ____________________________________________________________
consensus GTTTGAGCGGCAACTATTTTACCCAGA-TTGGGCCGGAATGCAGAAACCTTCTGGAGAAG
 
. : . : . : . : . : . :
rJMSF044I16+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF037C16+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF046P03+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF017N19+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF036O16+ AAGGTTCTTGATATAGACAACANCTGCATATNGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF042F11+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF017F04+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMSF008N24+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
rJMFF001H22+ AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
                      ____________________________________________________________
consensus AAGGTTCTTGATATAGACAACAACTGCATATTGGATCTTCCCAATCAGAGAAGTGCCCAG
 
. : . : . : . : . : . :
rJMSF044I16+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF037C16+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF046P03+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF017N19+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF036O16+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF042F11+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF017F04+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMSF008N24+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
rJMFF001H22+ GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
                      ____________________________________________________________
consensus GTCTGTAAAGATTTCTTCTTGCACTACCAGAAATGCCCAGACCATAAATCCTTGTTGTAT
 
. : . : . : . : . : . :
rJMSF044I16+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF037C16+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF046P03+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF017N19+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF036O16+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF042F11+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF017F04+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMSF008N24+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
rJMFF001H22+ GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
                      ____________________________________________________________
consensus GTGCCTTGCGACATTGATGAATCTCCCAGGAAGGCAGGTCCCCATCCCCATCCTCATCGT
 
. : . : . : . : . : . :
rJMSF044I16+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF037C16+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF046P03+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGAC---
rJMSF017N19+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF036O16+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF042F11+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF017F04+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMSF008N24+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
rJMFF001H22+ CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
                      ____________________________________________________________
consensus CCTTACAAAAAACATAAAAGAGGTTCTTCAACTACCTATGCGGCCCTCAAGGTTGACAGG
 
. : . : . : . : . : . :
rJMSF044I16+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF037C16+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF046P03+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF017N19+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF036O16+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF042F11+ CCATGAATGATGAAT---CAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF017F04+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMSF008N24+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
rJMFF001H22+ CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
                      ____________________________________________________________
consensus CCATGAATGATGAATCTGCAAGTTCCACTTCTTCTGGTGTATGTATGTATGTAATTAATT
 
. : . : . : . : . : . :
rJMSF044I16+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF037C16+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF046P03+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF017N19+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF036O16+ ACCTCAATAGTTTCGAGTAANTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF042F11+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF017F04+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMSF008N24+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
rJMFF001H22+ ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
                      ____________________________________________________________
consensus ACCTCAATAGTTTCGAGTAATTATTTGGTATTGATTTTCTTGTCTCCCCACATTGGGCTT
 
. : . : . : . : . : . :
rJMSF044I16+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF037C16+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF046P03+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF017N19+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF036O16+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTNGTAATTGTTCTTCNTTAAGGTTGT
rJMSF042F11+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF017F04+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMSF008N24+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
rJMFF001H22+ AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
                      ____________________________________________________________
consensus AAGCCCTACTACATAGGCAAGAACTTCATCATATTTGTAATTGTTCTTCTTTAAGGTTGT
 
. : . : . : . : . : . :
rJMSF044I16+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAA
rJMSF037C16+ TTGTAAAACTAGGTATGTATGTATTGACTTC
rJMSF046P03+ TTGTAAAACTAGGTAT
rJMSF017N19+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCA
rJMSF036O16+ TTGTAAAACTAGGTATGTATGTATNGACTTC
rJMSF042F11+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCATAAATAATTGAAGAAT
rJMSF017F04+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCATAAATAATTGAAGAATTGGCA
rJMSF008N24+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCATAAATAATTGAAGAATTGGCA
rJMFF001H22+ TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCATAAATAATTGAAGAATTGGCA
                      ____________________________________________________________
consensus TTGTAAAACTAGGTATGTATGTATTGACTTCTAAACTCATAAATAATTGAAGAATTGGCA
 
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rJMSF017F04+ AAAATGGTGCCTTCTTCATTGCTCAATGTAGTTTCCT
rJMSF008N24+ AAAATGGTGCCTTCTTCATTGCTCAATGTAGTTTCCTTGTCCAGTTCAGGCATCTATCAG
rJMFF001H22+ AAAATGGTGCCTTCTTCATTGCTCAATGTAGTTTCCTTGTCCAGTTCAGGCATCTATCAG
                      ____________________________________________________________
consensus AAAATGGTGCCTTCTTCATTGCTCAATGTAGTTTCCTTGTCCAGTTCAGGCATCTATCAG
 
. : . : . : . : . : . :
rJMSF008N24+ AGTTTGATGCATCTATATTGATGAAAATTTGAGCTAATATATAAAGCTCGGTCACTCATA
rJMFF001H22+ AGTTTGATGCATCTATATTGATGAAAATTTGAGCTAATATATAAAGCTCGGTCACTCATA
                      ____________________________________________________________
consensus AGTTTGATGCATCTATATTGATGAAAATTTGAGCTAATATATAAAGCTCGGTCACTCATA
 
. : . : . : . : . : . :
rJMSF008N24+ AGTTAGCTTTTGTAGTG
rJMFF001H22+ AGTTAGCTTTTGTAGTGTAATTAGGACTTGTATTTATATTAGAACTACAAAAAGCCAAAG
                      ____________________________________________________________
consensus AGTTAGCTTTTGTAGTGTAATTAGGACTTGTATTTATATTAGAACTACAAAAAGCCAAAG