Contig 003920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015M12Sequence511003920 (3)ref|XP_006352439.1|2e-23PREDICTED: aspartic proteinase PCS1-like [Solanum tuberosum]
JMFF032D24Sequence514003920 (3)ref|XP_006352439.1|4e-24PREDICTED: aspartic proteinase PCS1-like [Solanum tuberosum]
JMSF052D12Sequence672003920 (3)ref|XP_006352439.1|3e-59PREDICTED: aspartic proteinase PCS1-like [Solanum tuberosum]849015193emb|CDP01649.1|5e-101unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF052D12+                                                           CATCCGAGGACC
                      ____________________________________________________________
consensus                                                             CATCCGAGGACC
 
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JMSF052D12+           ATAGGAGGGGTAGTCTGGGACTCGGAAAACGAAACTTTTTCCCTGACGAGATTGCCCTCC
                      ____________________________________________________________
consensus             ATAGGAGGGGTAGTCTGGGACTCGGAAAACGAAACTTTTTCCCTGACGAGATTGCCCTCC
 
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JMSF052D12+           GCGTAGGTTCCATCGGCGTAGAAGTAGGAATAGTGGCAGAGCTGCTTCTGGTCGCACGAA
                      ____________________________________________________________
consensus             GCGTAGGTTCCATCGGCGTAGAAGTAGGAATAGTGGCAGAGCTGCTTCTGGTCGCACGAA
 
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JMFF015M12+                                       GTTTACACACGGGGTGGTTGCAGGGGAGAACC
JMFF032D24+                                       GTTTACACACGGGGTGGTTGCAGGGGAGAACC
JMSF052D12+           GTCGGGAGGGTAAAATCGGGAATTCTCGGTTTACACACGGGGTGGTTGCAGGGGAGAACC
                      ____________________________________________________________
consensus             GTCGGGAGGGTAAAATCGGGAATTCTCGGTTTACACACGGGGTGGTTGCAGGGGAGAACC
 
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JMFF015M12+           GAGAACGAAGACGACAACGACGGGTCAAACGACGTCGTCGGAGGCGGCGCCTTCGCCGGC
JMFF032D24+           GAGAACGAAGACGACAACGACGGGTCAAACGACGTCGTCGGAGGCGGCGCCTTCGCCGGC
JMSF052D12+           GAGAACGAAGACGACAACGACGGGTCAAACGACGTCGTCGGAGGCGGCGCCTTCGCCGGC
                      ____________________________________________________________
consensus             GAGAACGAAGACGACAACGACGGGTCAAACGACGTCGTCGGAGGCGGCGCCTTCGCCGGC
 
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JMFF015M12+           GGAGCTTTCTTGTGGCACTGAATCCAAGAAAGCTGGCTCCCGGTGTCCAAAACCATCTGT
JMFF032D24+           GGAGCTTTCTTGTGGCACTGAATCCAAGAAAGCTGGCTCCCGGTGTCCAAAACCATCTGT
JMSF052D12+           GGAGCTTTCTTGTGGCACTGAATCCAAGAAAGCTGGCTCCCGGTGTCCAAAACCATCTGT
                      ____________________________________________________________
consensus             GGAGCTTTCTTGTGGCACTGAATCCAAGAAAGCTGGCTCCCGGTGTCCAAAACCATCTGT
 
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JMFF015M12+           TGATCCTGCGCCGGCGTCCCTATCGGCAGCGTCACCACCAGCGCCATCGAATACTTGAAA
JMFF032D24+           TGATCCTGCGCCGGCGTCCCTATCGGCAGCGTCACCACCAGCGCCATCGAATACTTGAAA
JMSF052D12+           TGATCCTGCGCCGGCGTCCCTATCGGCAGCGTCACCACCAGCGCCATCGAATACTTGAAA
                      ____________________________________________________________
consensus             TGATCCTGCGCCGGCGTCCCTATCGGCAGCGTCACCACCAGCGCCATCGAATACTTGAAA
 
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JMFF015M12+           CTCGACTTGTAGTTCAACGCCGGCGCGTCACCGAGCCGCCGAGAAGAAAGGTAAATATTC
JMFF032D24+           CTCGACTTGTAGTTCAACGCCGGCGCGTCACCGAGCCGCCGAGAAGAAAGGTAAATATTC
JMSF052D12+           CTCGACTTGTAGTTCAACGCCGGCGCGTCACCGAGCCGCCGAGAAGAAAGGTAAATATTC
                      ____________________________________________________________
consensus             CTCGACTTGTAGTTCAACGCCGGCGCGTCACCGAGCCGCCGAGAAGAAAGGTAAATATTC
 
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JMFF015M12+           CTAGCGGAACCGCCACGAGACAACGAGGTTGAGGTAAGAGGAAAGGAACCAGACAACAAG
JMFF032D24+           CTAGCGGAACCGCCACGAGACAACGAGGTTGAGGTAAGAGGAAAGGAACCAGACAACAAG
JMSF052D12+           CTAGCGGAACCGCCACGAGACAACGAGGTTGAGGTAAGAGGAAAGGAACCAGACAACAAG
                      ____________________________________________________________
consensus             CTAGCGGAACCGCCACGAGACAACGAGGTTGAGGTAAGAGGAAAGGAACCAGACAACAAG
 
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JMFF015M12+           GCAAAGGTTCCGAGAAAGTTGCAGGAAACAATAAGACAGAAAAGGAAGAAGAAAGAGGTT
JMFF032D24+           GCAAAGGTTCCGAGAAAGTTGCAGGAAACAATAAGACAGAAAAGGAAGAAGAAAGAGGTT
JMSF052D12+           GCAAAGGTTCCGAGAAAGTTGCAGGAAACAATAAGACAGAAAAGGAAGAAGAAAGAGGTT
                      ____________________________________________________________
consensus             GCAAAGGTTCCGAGAAAGTTGCAGGAAACAATAAGACAGAAAAGGAAGAAGAAAGAGGTT
 
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JMFF015M12+           GCAGAAGCCATGAGGAAGTGAAAAACTGAAAATGGTGGTTTTAGTTTAACAGAGGGTTTA
JMFF032D24+           GCAGAAGCCATGAGGAAGTGAAAAACTGAAAATGGTGGTTTTAGTTTAACAGAGGGTTTA
JMSF052D12+           GCAGAAGCCATGAGGAAGTGAAAAACTGAAAATGGTGGTTTTAGTTTAACAGAGGGTTTA
                      ____________________________________________________________
consensus             GCAGAAGCCATGAGGAAGTGAAAAACTGAAAATGGTGGTTTTAGTTTAACAGAGGGTTTA
 
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JMFF015M12+           ATCTTTATTGTTTCCCCAGAAGCTAAGGAGACGATATTTAGAGAGTACGTGTTAGTTGT 
JMFF032D24+           ATCTTTATTGTTTCCCCAGAAGCTAAGGAGACGATATTTAGAGAGTACGTGTTAGTTGT 
JMSF052D12+           ATCTTTATTGTTTCCCCAGAAGCTAAGGAGACGATATTTAGAGAGTACGTGTTAGTTGTC
                      ____________________________________________________________
consensus             ATCTTTATTGTTTCCCCAGAAGCTAAGGAGACGATATTTAGAGAGTACGTGTTAGTTGTC