Contig 003905:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS066B01Sequence627003905 (8)ref|XP_009767734.1|77.8PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMFS102C11Sequence604003905 (8)ref|XP_009767734.1|72.8PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMFS117C06Sequence624003905 (8)ref|XP_009767734.1|79.3PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMFS121E08Sequence576003905 (8)ref|XP_009767734.1|62.8PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMFS152A05Sequence620003905 (8)ref|XP_009767734.1|79.3PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMFS163B05Sequence618003905 (8)ref|XP_009767734.1|80.9PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMSF031M17Sequence630003905 (8)ref|XP_009767734.1|75.9PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]704009962 (3)ref|XP_009767734.1|214PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]
JMSF050I24Sequence289003905 (8)677009962 (3)ref|XP_009767734.1|182PREDICTED: uncharacterized protein LOC104218849 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS163B05+                       TATGCTAATGCTTCAACCACTTCAGAGAGACCGGAGTGCAAAACCTTC
JMFS152A05+                              ATGCTTCAACCACTTCAGAGAGACCGGAGTGCAAAACCTTC
JMFS117C06+                              ATGCTTCAACCACTTCAGAGAGACCGGAGTGCAAAACCTTC
JMFS102C11+                                               GAGAGACCGGAGTGCAAAACCTTC
JMFS066B01+                              ATGCTTCAACCACTTCAGAGAGACCGGAGTGCAAAACCTTC
JMSF031M17+                                         ACTTCAGAGAGACCGGAGTGCAAAACCTTC
                      ____________________________________________________________
consensus                         TATGCTAATGCTTCAACCACTTCAGAGAGACCGGAGTGCAAAACCTTC
 
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JMFS163B05+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
JMFS152A05+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
JMFS117C06+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
JMFS102C11+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
JMFS121E08+                                                       CTGAACGTGGCCGGGA
JMFS066B01+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
JMSF031M17+           TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
                      ____________________________________________________________
consensus             TCTTCCAAGATTGCATCTAGCCGTGCCGGTTGAGTTAGAATGGTCTGAACGTGGCCGGGA
 
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JMFS163B05+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMFS152A05+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMFS117C06+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMFS102C11+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMFS121E08+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMFS066B01+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
JMSF031M17+           ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
                      ____________________________________________________________
consensus             ATGGCAGCATTGGCGCGAGGCATTATATCCTCGATGAGGTGCAGGAGAGGTTTCACTTTG
 
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JMFS163B05+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMFS152A05+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMFS117C06+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMFS102C11+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMFS121E08+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMFS066B01+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
JMSF031M17+           TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
                      ____________________________________________________________
consensus             TAGTGGACTGCATCCACGTCGTGAGTTGCTCTAACATGGTCCATCATGGTGGTATCCTCG
 
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JMFS163B05+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMFS152A05+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMFS117C06+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMFS102C11+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMFS121E08+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMFS066B01+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
JMSF031M17+           GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
                      ____________________________________________________________
consensus             GAGCTAGCAAGAAGATCTCCCCTTCTATTCCTAAGATACCTACCAGCCGGAATGGGATTA
 
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JMFS163B05+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMFS152A05+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMFS117C06+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMFS102C11+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMFS121E08+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMFS066B01+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
JMSF031M17+           ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
                      ____________________________________________________________
consensus             ACGGTTTTCGCCTTCAACGGGGCTACCACCGGGAGGGGTGCAGGGACAACAAGGCCACTG
 
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JMFS163B05+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMFS152A05+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMFS117C06+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMFS102C11+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMFS121E08+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMFS066B01+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMSF031M17+           CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
JMSF050I24+                      GATGGCGTTGACGTTGGCCACGGTTGCAGGGACGNCAACTTCTTGGACT
                      ____________________________________________________________
consensus             CTCAGTGGATTGATGGCGTTGACGTTGGCCACGGTTGCAGGGACGACAACTTCTTGGACT
 
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JMFS163B05+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMFS152A05+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMFS117C06+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMFS102C11+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMFS121E08+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMFS066B01+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMSF031M17+           GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
JMSF050I24+           GGGTAGGTGGGAGGAGTAGTANTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
                      ____________________________________________________________
consensus             GGGTAGGTGGGAGGAGTAGTAGTATATCCCCTCGGGTTGATCTGGCCGGTGGTCCTAGGG
 
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JMFS163B05+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMFS152A05+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMFS117C06+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMFS102C11+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMFS121E08+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMFS066B01+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMSF031M17+           ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
JMSF050I24+           ATGATTTCGTGGGTCGGNTTAATGGTGNTACCAGGAGGAGGAATCGGAGTCACCATAGGA
                      ____________________________________________________________
consensus             ATGATTTCGTGGGTCGGGTTAATGGTGGTACCAGGAGGAGGAATCGGAGTCACCATAGGA
 
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JMFS163B05+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMFS152A05+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMFS117C06+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMFS102C11+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMFS121E08+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMFS066B01+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMSF031M17+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
JMSF050I24+           GTGGTGTTGGTCACCCTAGGGATGTTATCAGNNCTGATGGTTTGAGCCATTTTTCGAAGG
                      ____________________________________________________________
consensus             GTGGTGTTGGTCACCCTAGGGATGTTATCAGTGCTGATGGTTTGAGCCATTTTTGGAAGG
 
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JMFS163B05+           TGGAGAAGAGAGGGTTTAGATAGCAATTAA                              
JMFS152A05+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGA                       
JMFS117C06+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAA                    
JMFS102C11+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAA                    
JMFS121E08+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAAGGGAA               
JMFS066B01+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAAGGGAA               
JMSF031M17+           TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAAGGGAAATGGATATT      
JMSF050I24+           TGGAGAAGAGAGGCATTAGATAGCAATTAAGAGATGAAAAGGGAAATGGATATTNCTGTC
                      ____________________________________________________________
consensus             TGGAGAAGAGAGGGTTTAGATAGCAATTAAGAGATGAAAAGGGAAATGGATATTNCTGTC