Contig 003890:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046D03Sequence456003890 (2)ref|XP_009618472.1|1e-69PREDICTED: cysteine desulfurase 1, mitochondrial [Nicotiana tomentosiformis]667013917 (7)ref|XP_006367305.1|4e-104PREDICTED: lysophospholipid acyltransferase LPEAT1-like isoform X1 [Solanum tub
JMSF048O11Sequence626003890 (2)emb|CDP02654.1|7e-107unnamed protein product [Coffea canephora]765015180gb|ACI47522.1|6e-90iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048O11+ TTGTCTAGGTTAATAAGCCCGTCGGG
                      ____________________________________________________________
consensus TTGTCTAGGTTAATAAGCCCGTCGGG
 
. : . : . : . : . : . :
JMSF048O11+ TTCAACGGGAAGGTAAGTAACATCAAAGCCCTCTTGCTGCAGATGGCGGCACGAATCAAG
                      ____________________________________________________________
consensus TTCAACGGGAAGGTAAGTAACATCAAAGCCCTCTTGCTGCAGATGGCGGCACGAATCAAG
 
. : . : . : . : . : . :
JMSF046D03+ TGTGGTGATGACGTGGCGNTTCTTCTCCCTGTAGAAATG
JMSF048O11+ TACGCACTTGTGCTCAGTCTGTGTGGTGATGACGTGGCGCTTCTTCTCCCTGTAGAAATG
                      ____________________________________________________________
consensus TACGCACTTGTGCTCAGTCTGTGTGGTGATGACGTGGCGCTTCTTCTCCCTGTAGAAATG
 
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JMSF046D03+ CAGANCGCCTTTAACGGAGATGTTATTGGATTCNGTAGCACCGGAAGTGAAGATAATCTC
JMSF048O11+ CAGAACGCCTTTAACGGAGATGTTATTGGATTCAGTAGCACCGGAAGTGAAGATAATCTC
                      ____________________________________________________________
consensus CAGAACGCCTTTAACGGAGATGTTATTGGATTCAGTAGCACCGGAAGTGAAGATAATCTC
 
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JMSF046D03+ CTTCGGAGAAGCGTTAATTAGGGTCGCAACTTGCGCCCGGTCCGTCTCGNCGTCCTGGTC
JMSF048O11+ CTTCGGAGAAGCGTTAATTAGGGTCGCAACTTGCGCCCGGGCCGTCTCGACGGCCTGGTC
                      ____________________________________________________________
consensus CTTCGGAGAAGCGTTAATTAGGGTCGCAACTTGCGCCCGGTCCGTCTCGACGTCCTGGTC
 
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JMSF046D03+ CGNTTCCCANCCGTAGAGGTGAGTCCGAGAGTGAGGGTTCCCGAATCGCGAGAGATAATA
JMSF048O11+ CGATTCCCAGCCGTAGAGGTGAGTCCGAGAGTGAGGGTTCCCGAATCGCGAGAGATAATA
                      ____________________________________________________________
consensus CGATTCCCAGCCGTAGAGGTGAGTCCGAGAGTGAGGGTTCCCGAATCGCGAGAGATAATA
 
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JMSF046D03+ AGGGAGCATGGCGTCAAGCACACGCGGATCCACCGGAGAAGTGGCCTGCATATCCAGGTA
JMSF048O11+ AGGGAGCATGGCGTCAAGCACACGCGGATCCACCGGAGAAGTGGCCTGCATATCCAGGTA
                      ____________________________________________________________
consensus AGGGAGCATGGCGTCAAGCACACGCGGATCCACCGGAGAAGTGGCCTGCATATCCAGGTA
 
. : . : . : . : . : . :
JMSF046D03+ GAGAGGTCTTCCGGAGATCTTCACTCCTTTCATGGTGACTCCAGCTGTTTNTTCCTCATA
JMSF048O11+ GAGAGGTCTTCCGGAGATCTTCACTCCTTTCATGGTGACTCCAGCTGTTTCTTCCTCATA
                      ____________________________________________________________
consensus GAGAGGTCTTCCGGAGATCTTCACTCCTTTCATGGTGACTCCAGCTGTTTCTTCCTCATA
 
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JMSF046D03+ GGGCTCTACTCCCGCCGCCGCCGCAGCAGAGGTCGANAAAGGGCGGAGAATGGCGTAGGG
JMSF048O11+ GGGCTCTACTCCCGCCGCCGCCGCAGCAGAGGTCGAAAAAGGGCGGAGAATGGCGTAGGG
                      ____________________________________________________________
consensus GGGCTCTACTCCCGCCGCCGCCGCAGCAGAGGTCGAAAAAGGGCGGAGAATGGCGTAGGG
 
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JMSF046D03+ TTTATCAAACGAGCGGCGGAAAA
JMSF048O11+ TTTATCAAACGAGCGGCGGAAAACGGCGGCTAGAAGCTTCGAGGCCATCGTTATGAATCA
                      ____________________________________________________________
consensus TTTATCAAACGAGCGGCGGAAAACGGCGGCTAGAAGCTTCGAGGCCATCGTTATGAATCA
 
. : . : . : . : . : . :
JMSF048O11+ AACAATTATGCTCCGATGAAGAATCGACTCTTTAACGCCGACGAGTTGATTCTAAACTCC
                      ____________________________________________________________
consensus AACAATTATGCTCCGATGAAGAATCGACTCTTTAACGCCGACGAGTTGATTCTAAACTCC