Contig 003875:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015P01Sequence569003875 (2)ref|XP_010943546.1|2e-23PREDICTED: squalene monooxygenase-like [Elaeis guineensis]663010461 (3)ref|XP_011078470.1|2e-73PREDICTED: squalene monooxygenase-like [Sesamum indicum]
JMSF046O16Sequence641003875 (2)ref|XP_008220536.1|7e-70PREDICTED: squalene monooxygenase-like [Prunus mume]118010461 (3)ref|XP_004498941.1|2e-08PREDICTED: squalene monooxygenase-like isoform X1 [Cicer arietinum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046O16+ TTCAAGCAAGGATGTAACAGTNCCTTCCTCCAATTGGACATT
                      ____________________________________________________________
consensus TTCAAGCAAGGATGTAACAGTNCCTTCCTCCAATTGGACATT
 
. : . : . : . : . : . :
JMFF015P01+ GAATAAAANGCCCATTANGAAAGNTTNT
JMSF046O16+ GGGAAGAGATGCAGCTTTCTCCCTCATTCTTTGAATAAAACGCCCATTATGAAAGCTTCT
                      ____________________________________________________________
consensus GGGAAGAGATGCAGCTTTCTCCCTCATTCTTTGAATAAAACGCCCATTATGAAAGCTTCT
 
. : . : . : . : . : . :
JMFF015P01+ TCCAGACACATNNGAANGAAANTTCTCCAAAGGATAAGAAAGGCGGGTGTTNTTCCCGTC
JMSF046O16+ TCCAGACACATNTGAATGAAACTTCTCCAAAGGATAAGAAAGGCGGGTGTTCTTCCCGTC
                      ____________________________________________________________
consensus TCCAGACACATNTGAATGAAACTTCTCCAAAGGATAAGAAAGGCGGGTGTTCTTCCCGTC
 
. : . : . : . : . : . :
JMFF015P01+ C-TGAAGAGAGCATACCCAAATACTCGNTGCGCATCAATGTGTTCCACGCAGTNTTCAAG
JMSF046O16+ CTTGAAGAGAGCATACCCAAATACTCGCTGCGCATCAATGTGTTCCACGCAGTCTTCAAG
                      ____________________________________________________________
consensus CTTGAAGAGAGCATACCCAAATACTCGCTGCGCATCAATGTGTTCCACGCAGTCTTCAAG
 
. : . : . : . : . : . :
JMFF015P01+ ACCCAACTCAATCAACTNGAGGTAACCACCAGGTTGTAGCAATTCTCCAACAATTCGGTN
JMSF046O16+ ACCCAACTCAATCAACTTGAGGTAACCACCAGGTTGTAGCAATTCTCCAACAATTCGGTC
                      ____________________________________________________________
consensus ACCCAACTCAATCAACTTGAGGTAACCACCAGGTTGTAGCAATTCTCCAACAATTCGGTC
 
. : . : . : . : . : . :
JMFF015P01+ TGGCTCGCTCAAATCTCTCTCAATCACATGAACCCTACGCCCATCCTTTCCGAGAGTGTG
JMSF046O16+ TGGCTCGCTCAAATCTCTCTCAATCACATGAACCCTACGCCCATCCTTTCCGAGAGTGTG
                      ____________________________________________________________
consensus TGGCTCGCTCAAATCTCTCTCAATCACATGAACCCTACGCCCATCCTTTCCGAGAGTGTG
 
. : . : . : . : . : . :
JMFF015P01+ GGCCAGGGCGGCGCCGGCAACTCCGGCGCCGACAATGGATTGAGTCGACATCGTCGCGAC
JMSF046O16+ GGCCAGGGCGGCGCCGGCAACTCCGGCGCCGACAAT-GATGATGTCGACATCGTCGCGAC
                      ____________________________________________________________
consensus GGCCAGGGCGGCGCCGGCAACTCCGGCGCCGACAATGGATTGTGTCGACATCGTCGCGAC
 
. : . : . : . : . : . :
JMFF015P01+ CGCCGTCCCTCGATCTGCACTCGCCGTCGATAATGGTGGTTGTCTTGACGCCGTCCTTCT
JMSF046O16+ CGCCGTCCCTCGATNTGCACTCGCCGTCGATAATGGTGGTTGTCTTGACGCCGTCCTTCT
                      ____________________________________________________________
consensus CGCCGTCCCTCGATCTGCACTCGCCGTCGATAATGGTGGTTGTCTTGACGCCGTCCTTCT
 
. : . : . : . : . : . :
JMFF015P01+ CACTCCCTCCTCCGTTTCTTCTAAAAAACAATGCGTAAGCCGCCACAAGCCCTAAAACCC
JMSF046O16+ CACTCCCTCCTCCGTTTNTTNTAAAAAACAATGCGTAAGCCGCCACAAGCCCTAAAACCC
                      ____________________________________________________________
consensus CACTCCCTCCTCCGTTTCTTCTAAAAAACAATGCGTAAGCCGCCACAAGCCCTAAAACCC
 
. : . : . : . : . : . :
JMFF015P01+ CGGCGAGAAGCGTGCCGGCGAGATACTGATCCACCATTTTTTTCCGGACAGTGCCGAACG
JMSF046O16+ CGGCGAGAAGCGTGCCGGCGAGATACTGATCCACCATTTTTTTCCGGACAGTGCCGAACG
                      ____________________________________________________________
consensus CGGCGAGAAGCGTGCCGGCGAGATACTGATCCACCATTTTTTTCCGGACAGTGCCGAACG
 
. : . : . : . : . : . :
JMFF015P01+ ATGCCGCGCGCTCTCACTCTCTTTCTCTCCTCTGTATCTCTAAACCTCTCTCTCTCTC
JMSF046O16+ ATGCCGCGCGCTCTCACTCTCTTTCTCTCCTCTGTATCTCTAAACCTCTCTCTCTCTCTC
                      ____________________________________________________________
consensus ATGCCGCGCGCTCTCACTCTCTTTCTCTCCTCTGTATCTCTAAACCTCTCTCTCTCTCTC