clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005L01 | Sequence | 276 | 003847 (4) | ref|XP_006350764.1| | 8e-12 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum] | 716 | 005869 (9) | ref|XP_009618898.1| | 2e-16 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform |
JMSF004D08 | Sequence | 287 | 003847 (4) | ref|NP_001265951.1| | 8e-15 | Hop-interacting protein THI033 [Solanum lycopersicum] gb|AEW69796.1| Hop-interac | 215 | 001245 (24) | emb|CDO96950.1| | 2e-33 | unnamed protein product [Coffea canephora] |
JMSF024D19 | Sequence | 456 | 003847 (4) | ref|XP_009618898.1| | 1e-36 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 349 | 013496 (5) | ref|XP_010106460.1| | 2e-22 | Putative E3 ubiquitin-protein ligase XBAT31 [Morus notabilis] gb|EXC10636.1| Put |
JMSF043C10 | Sequence | 828 | 003847 (4) | ref|XP_009618898.1| | 2e-113 | PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform | 671 | 005869 (9) | gb|EYU36266.1| | 1e-12 | hypothetical protein MIMGU_mgv1a008790mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF043C10+ ACCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAA
____________________________________________________________
consensus ACCATAGTTTCCAGTTGATGCACAAACCAAAGCTCCATTGTTCAATAA
. : . : . : . : . : . :
JMSF043C10+ CATATGAACACATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTT
____________________________________________________________
consensus CATATGAACACATTCGGGCCGTCTCTGACGAGAAGCCAAGTGCAAAGGTGTTGCCCCCTT
. : . : . : . : . : . :
JMSF043C10+ ACCATCCCTAACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACG
____________________________________________________________
consensus ACCATCCCTAACATTCACAAATCTGGCATACCCCCAAGAAGCAGCAACATGGGATGTACG
. : . : . : . : . : . :
JMSF043C10+ AGCCGAAGAGAGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAA
____________________________________________________________
consensus AGCCGAAGAGAGAATTGCTTTAAGGCAATCGGAATGGCCATAGTAAGCAGCATAGTGCAA
. : . : . : . : . : . :
JMSF043C10+ ACAAGTTCGCCCATGAAGTGAATCAAACTTTAATATCTGTTAAATTTTCCAAGATCAGCC
____________________________________________________________
consensus ACAAGTTCGCCCATGAAGTGAATCAAACTTTAATATCTGTTAAATTTTCCAAGATCAGCC
. : . : . : . : . : . :
JMSF043C10+ ACACATTCAATTCAAATTAATACTATAAATGGAATGAAATGGAATATGGGTAGCTTAGCT
____________________________________________________________
consensus ACACATTCAATTCAAATTAATACTATAAATGGAATGAAATGGAATATGGGTAGCTTAGCT
. : . : . : . : . : . :
JMSF043C10+ TACGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAATCGATCTTTCCATGCATTGCAGC
____________________________________________________________
consensus TACGTTGGCCCCAGCTTCGATGAGCTTTTGCACACAATCGATCTTTCCATGCATTGCAGC
. : . : . : . : . : . :
JMSF024D19+ CTGCTTGTGGCGATTCAACAAATCTGGATTAACAGATCGGTTTAA
JMSF043C10+ CAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAATCTGGATTAACAGATCGGTTTAA
____________________________________________________________
consensus CAGCATCAATGGAGTCTGCTTGTGGCGATTCAACAAATCTGGATTAACAGATCGGTTTAA
. : . : . : . : . : . :
JMSF024D19+ GAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCGGCTATATGCAAAGCGGAGTGGCG
JMSF043C10+ GAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCGGCTATATGCAAAGCGGAGTGGCG
____________________________________________________________
consensus GAGCATAGTAACGACCTCGATCTGGCCATTGGCGGCGGCTATATGCAAAGCGGAGTGGCG
. : . : . : . : . : . :
JMSF024D19+ ATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCTCTCCCCAACACCGTCTCCACCGT
JMSF004D08+ ATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCTCTCCCCAACACCGTCTCCACCGT
JMFF005L01+ GGTGTGGTGGATGAGACCTGGCTCTCTCCCCAACACCGTCTCCACCGT
JMSF043C10+ ATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCTCTCCCCAACACCGTCTCCACCGT
____________________________________________________________
consensus ATCATACACCGTGGTGTGGTGGATGAGACCTGGCTCTCTCCCCAACACCGTCTCCACCGT
. : . : . : . : . : . :
JMSF024D19+ CTCCACATCTCCACACTGCACGGCGGTGAACAGCCCGTGCTCATCACTCGTTCTGCAACT
JMSF004D08+ CTCCACATCTCCACACTGCACGGCGGTGAACAGCCCGTGCTCATCACTCGTTCTGCAACT
JMFF005L01+ CTCCACATCTCCACACTGCACGGCGGTGAACAGCCCGTGCTCATCACTCGTTCTGCAACT
JMSF043C10+ CTCCACATCTCCACACTGCACGGCGGTGAACAGCCCGTGCTCATCACTCGTTCTGCAACT
____________________________________________________________
consensus CTCCACATCTCCACACTGCACGGCGGTGAACAGCCCGTGCTCATCACTCGTTCTGCAACT
. : . : . : . : . : . :
JMSF024D19+ CAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTTCACGGTGGGGGGAGATGAAGCCC
JMSF004D08+ CAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTTCACGGTGGGGGGAGATGAAGCCC
JMFF005L01+ CAGCCCCTGACCCATTCCT-AAGCTGCGATCTTTTTTCACGGTGGGGGGAGATGAAGCCC
JMSF043C10+ CAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTTCACGGTGGGGGGAGATGAAGCCC
____________________________________________________________
consensus CAGCCCCTGACCCATTCCTAAAGCTGCGATCTTTTTTCACGGTGGGGGGAGATGAAGCCC
. : . : . : . : . : . :
JMSF024D19+ AGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGCAGAGGGGAGTGGTGGCGGAATTG
JMSF004D08+ AGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGCAGAGGGGAGTGGTGGCGGAATTG
JMFF005L01+ AGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGCAGAGGGGAGTGGTGGCGGAATTG
JMSF043C10+ AGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGCAGAGGGGAGTGGTGGCGGAATTG
____________________________________________________________
consensus AGAAGAGGAGGCACCCCTGCACCACGGCGGCTTGGGCAGAGGGGAGTGGTGGCGGAATTG
. : . : . : . : . : . :
JMSF024D19+ GAAAGTGTGAGCTCCTACATATTTAATGCCGGTTAT
JMSF004D08+ GAAAGTGTGAGCTCCTACATATTTAATGCCGGTTATGGGCGTC
JMFF005L01+ GAAAGTGTGAGCTCCTACATATTTAATGCCGGTTATGGGCGTC
JMSF043C10+ GAAAGTGTGAGCTCCTACATATTTAATGCCGGTTATGGGCGTCTGTAAAGGAGACTTTTC
____________________________________________________________
consensus GAAAGTGTGAGCTCCTACATATTTAATGCCGGTTATGGGCGTCTGTAAAGGAGACTTTTC