Contig 003846:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024C11Sequence377003846 (2)726001459 (3)ref|XP_006339953.1|248PREDICTED: uncharacterized protein LOC102588626 [Solanum tuberosum]
JMSF042P14Sequence437003846 (2)674001459 (3)ref|XP_010090004.1|7e-69hypothetical protein L484_027234 [Morus notabilis] gb|EXB38801.1| hypothetical p

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042P14+ TNTNNNTCANNATCNNT
                      ____________________________________________________________
consensus TNTNNNTCANNATCNNT
 
. : . : . : . : . : . :
JMSF024C11+ CTCTTCCTCCTCCTCTTC
JMSF042P14+ NTCATCTCCTNTCCCTNNTAAGCCACCAAAACCCTCATCATCCTCTTCCTCCTCCTCTTC
                      ____________________________________________________________
consensus NTCATCTCCTNTCCCTNNTAAGCCACCAAAACCCTCATCATCCTCTTCCTCCTCCTCTTC
 
. : . : . : . : . : . :
JMSF024C11+ TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
JMSF042P14+ TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
                      ____________________________________________________________
consensus TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
 
. : . : . : . : . : . :
JMSF024C11+ ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
JMSF042P14+ ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
                      ____________________________________________________________
consensus ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
 
. : . : . : . : . : . :
JMSF024C11+ GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
JMSF042P14+ GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
                      ____________________________________________________________
consensus GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
 
. : . : . : . : . : . :
JMSF024C11+ AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
JMSF042P14+ AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
                      ____________________________________________________________
consensus AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
 
. : . : . : . : . : . :
JMSF024C11+ TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
JMSF042P14+ TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
                      ____________________________________________________________
consensus TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
 
. : . : . : . : . : . :
JMSF024C11+ GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAG-GGGGAAGAAGAGAAGACTCACGTCC
JMSF042P14+ GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAGCGGGGAAGAAGAGAAGACTCACGTCC
                      ____________________________________________________________
consensus GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAGCGGGGAAGAAGAGAAGACTCACGTCC