Contig 003841:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042J23Sequence648003841 (2)ref|XP_008242398.1|53.1PREDICTED: uncharacterized protein LOC103340732 [Prunus mume]590003841 (2)ref|XP_008242398.1|53.1PREDICTED: uncharacterized protein LOC103340732 [Prunus mume]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042J23+ GTGATTCACGCTTCATCCTCACTACTCTGTCTCTCCGAATCAACGCTCA
JMSF042J23- GTGATTCACGCTTCATCCTCACTACTCTGTCTCTCCGAATCAACGCTCA
                      ____________________________________________________________
consensus GTGATTCACGCTTCATCCTCACTACTCTGTCTCTCCGAATCAACGCTCA
 
. : . : . : . : . : . :
rJMSF042J23+ ACACTCACCTCCGACAATGGTTTTGTAGCTATGCAAGGTACGTATGTCAACAGCGAGGAG
JMSF042J23- ACACTCACCTCCGACAATGGTTTTGTAGCTATGCAAGGTACGTATGTCAACAGCGAGGAG
                      ____________________________________________________________
consensus ACACTCACCTCCGACAATGGTTTTGTAGCTATGCAAGGTACGTATGTCAACAGCGAGGAG
 
. : . : . : . : . : . :
rJMSF042J23+ AGTTCTTGTCATTCAATGGTTTACTATGGCGAGGAAAATCTATATTGTATTGTCAGTGTG
JMSF042J23- AGTTCTTGTCATTCAATGGTTTACTATGGCGAGGAAAATCTATATTGTATTGTCAGTGTG
                      ____________________________________________________________
consensus AGTTCTTGTCATTCAATGGTTTACTATGGCGAGGAAAATCTATATTGTATTGTCAGTGTG
 
. : . : . : . : . : . :
rJMSF042J23+ GTCAAAGATTGAAGGTACGGACATCATGGACGGATCAAAACCCTGGAAGAAGGTATTGGG
JMSF042J23- GTCAAAGATTGAAGGTACGGACATCATGGACGGATCAAAACCCTGGAAGAAGGTATTGGG
                      ____________________________________________________________
consensus GTCAAAGATTGAAGGTACGGACATCATGGACGGATCAAAACCCTGGAAGAAGGTATTGGG
 
. : . : . : . : . : . :
rJMSF042J23+ ATTGTGCACATGAAAATCAAGGAGGGGTGTTGGTGGTTGTGTATTTGTGAGATGGTTTGA
JMSF042J23- ATTGTGCACATGAAAATCAAGGAGGGGTGTTGGTGGTTGTGTATTTGTGAGATGGTTTGA
                      ____________________________________________________________
consensus ATTGTGCACATGAAAATCAAGGAGGGGTGTTGGTGGTTGTGTATTTGTGAGATGGTTTGA
 
. : . : . : . : . : . :
rJMSF042J23+ CCCTCTAATGTGTTCAAGATCCAAGATGATTATTCCTGGGTTGCTAAGAAGAATAAACCG
JMSF042J23- CCCTCTAATGTGTTCAAGATCCAAGATGATTATTCCTGGGTTGCTAAGAAGAATAAACCG
                      ____________________________________________________________
consensus CCCTCTAATGTGTTCAAGATCCAAGATGATTATTCCTGGGTTGCTAAGAAGAATAAACCG
 
. : . : . : . : . : . :
rJMSF042J23+ GAATGAACAAGAAATTGAAGCCCTAAAAGCAAAGATTAGAGACATTGGCAGTGTTAAGGC
JMSF042J23- GAATGAACAAGAAATTGAAGCCCTAAAAGCAAAGATTAGAGACATTGGCAGTGTTAAGGC
                      ____________________________________________________________
consensus GAATGAACAAGAAATTGAAGCCCTAAAAGCAAAGATTAGAGACATTGGCAGTGTTAAGGC
 
. : . : . : . : . : . :
rJMSF042J23+ ATCTAATTCCACTGTGAAAACAAAAGTAAAGTGTTTGTGTAGAGTTGTGTTTATTGTATT
JMSF042J23- ATCTAATTCCACTGTGAAAACAAAAGTAAAGTGTTTGTGTAGAGTTGTGTTTATTGTATT
                      ____________________________________________________________
consensus ATCTAATTCCACTGTGAAAACAAAAGTAAAGTGTTTGTGTAGAGTTGTGTTTATTGTATT
 
. : . : . : . : . : . :
rJMSF042J23+ TGTTTTTGTAACAATGTTAGTGTTTGTTAGTTGGGAGTTCAAGGCTAATAGTGTCGGGGT
JMSF042J23- TGTTTTTGTAACAATGTTAGTGTTTGTTAGTTGGGAGTTCAAGGCTAATAGTGTCGGGGT
                      ____________________________________________________________
consensus TGTTTTTGTAACAATGTTAGTGTTTGTTAGTTGGGAGTTCAAGGCTAATAGTGTCGGGGT
 
. : . : . : . : . : . :
rJMSF042J23+ TAAAAAACTTATTTTAGCTTAACTAGTGTTGGAATGTAATGGCCTATGTAGAACTACTAT
JMSF042J23- TAAAAAACTTATTTTAGCTTAA-TAGTGTTGGAATGTAATGGCCTATGTAGAACTACTAT
                      ____________________________________________________________
consensus TAAAAAACTTATTTTAGCTTAACTAGTGTTGGAATGTAATGGCCTATGTAGAACTACTAT
 
. : . : . : . : . : . :
rJMSF042J23+ G
JMSF042J23- GTGAATGATCTATTGAAGAATGTTAATGAATGCTCAATTTAAGAATGGTCAAAAAAAAAA
                      ____________________________________________________________
consensus GTGAATGATCTATTGAAGAATGTTAATGAATGCTCAATTTAAGAATGGTCAAAAAAAAAA