Contig 003839:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D21Sequence528003839 (4)ref|XP_011079570.1|161PREDICTED: uncharacterized protein LOC105163060 [Sesamum indicum]
JMFF039F09Sequence757003839 (4)ref|XP_011079570.1|279PREDICTED: uncharacterized protein LOC105163060 [Sesamum indicum]
JMSF008H07Sequence397011916 (2)ref|XP_002275599.1|108PREDICTED: uncharacterized protein LOC100264117 [Vitis vinifera] emb|CBI36934.3|441003839 (4)ref|XP_011079570.1|68.9PREDICTED: uncharacterized protein LOC105163060 [Sesamum indicum]
JMSF042I12Sequence608003839 (4)ref|XP_011079570.1|124PREDICTED: uncharacterized protein LOC105163060 [Sesamum indicum]337017240

Alignment

This contig is upended


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rJMFF039F09+                                                               CGGCAGA
                      ____________________________________________________________
consensus                                                                  CGGCAGA
 
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rJMFF039F09+          ATGTTCAGTACAGGGAAATCCCGGGGAGGCTCTGCTCGCTCGCTACAAAGATTCAAGAAC
                      ____________________________________________________________
consensus             ATGTTCAGTACAGGGAAATCCCGGGGAGGCTCTGCTCGCTCGCTACAAAGATTCAAGAAC
 
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rJMFF039F09+          TGAAGCAAAGGGTTGCCTCGGGTGAGACCGGGAATGTAGATTACTATTCCTTGATTGGAT
                      ____________________________________________________________
consensus             TGAAGCAAAGGGTTGCCTCGGGTGAGACCGGGAATGTAGATTACTATTCCTTGATTGGAT
 
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rJMFF013D21+                                                                TCAGAC
rJMFF039F09+          TAAGGCGAGGTTGTTCAAGATCAGAACTTGAAAGAGCCCATTTGCTGCTTACTCTCAGAC
                      ____________________________________________________________
consensus             TAAGGCGAGGTTGTTCAAGATCAGAACTTGAAAGAGCCCATTTGCTGCTTACTCTCAGAC
 
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rJMFF013D21+          ATAAGCCTGATAAGTCCAGCAGCTTCATCGAGAGGTGCGAATATGCTGAGGAGCGCGATG
rJMFF039F09+          ATAAGCCTGATAAGTCCAGCAGCTTCATCGAGAGGTGCGAATATGCTGAGGAGCGCGATG
JMSF042I12-                                                               GCGCGATG
                      ____________________________________________________________
consensus             ATAAGCCTGATAAGTCCAGCAGCTTCATCGAGAGGTGCGAATATGCTGAGGAGCGCGATG
 
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rJMFF013D21+          TTGAATCCGTGAGGGAGAGGGCGAAGATGTCTGCATTGTTGTTGTATAGATTAATTCAGA
rJMFF039F09+          TTGAATCCGTGAGGGAGAGGGCGAAGATGTCTGCATTGTTGTTGTATAGATTAATTCAGA
rJMSF008H07+                                             TTGTTGTTGTATAGATTAATTCNGN
JMSF042I12-           TTGAATCCGTGAGGGAGAGGGCGAAGATGTCTGCATTGTTGTTGTATAGATTAATTCAGA
                      ____________________________________________________________
consensus             TTGAATCCGTGAGGGAGAGGGCGAAGATGTCTGCATTGTTGTTGTATAGATTAATTCAGA
 
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rJMFF013D21+          GGGGTTATACGAGCTTAATGACAACCATCATTGATGAAGAAGCTGCCGAGAAGCAGAGGA
rJMFF039F09+          GGGGTTATACGAGCTTAATGACAACCATCATTGATGAAGAAGCTGCCGAGAAGCAGAGGA
rJMSF008H07+          GGGGTTNTACGNGCTTAATGNCNACCCTCNTTGATGAAGAAGCNGCCGAGAAGCNGAGGA
JMSF042I12-           GGGGTTATACGAGCTTAATGACAACCATCATTGATGAAGAAGCTGCCGAGAAGCAGAGGA
                      ____________________________________________________________
consensus             GGGGTTATACGAGCTTAATGACAACCATCATTGATGAAGAAGCTGCCGAGAAGCAGAGGA
 
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rJMFF013D21+          AGAAGGCTGCGGCTGCATTGCAAGCAATGCAACAAGAGGTTCAACAAGAATCCAAAATCA
rJMFF039F09+          AGAAGGCTGCGGCTGCATTGCAAGCAATGCAACAAGAGGTTCAACAAGAATCCAAAATCA
rJMSF008H07+          ANAAGGCTGCGGCTGCNTTGCAAGCAATGCAACAAGNGGTTCAACNAGAATCCAAAATCA
JMSF042I12-           AGAAGGCTGCGGCTGCATTGCAAGCAATGCAACAAGAGGTTCAACAAGAATCCAAAATCA
                      ____________________________________________________________
consensus             AGAAGGCTGCGGCTGCATTGCAAGCAATGCAACAAGAGGTTCAACAAGAATCCAAAATCA
 
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rJMFF013D21+          AACCAATTAGCAGTTCTGAATCCTCTGTTAGGATTGAAAACAATGGTACAGCCACCACGC
rJMFF039F09+          AACCAATTAGCAGTTCTGAATCCTCTGTTAGGATTGAAAACAATGGTACAGCCACCACGC
rJMSF008H07+          AACCNATTAGCNGTTTTGAATCCTNTGTTAGGNTTGAAAACAATGGTACNGCCCCCCCNC
JMSF042I12-           AACCAATTAGCAGTTCTGAATCCTCTGTTAGGATTGAAAACAATGGTACAGCCACCACGC
                      ____________________________________________________________
consensus             AACCAATTAGCAGTTCTGAATCCTCTGTTAGGATTGAAAACAATGGTACAGCCACCACGC
 
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rJMFF013D21+          CCCCAGGATCAGTGTTTCAAGGCGTGTTCTGCCGAGACCTTGCAATTGTCGGGAATTTGC
rJMFF039F09+          CCCCAGGATCAGTGTTTCAAGGCGTGTTCTGCCGAGACCTTGCAATTGTCGGGAATTTGC
rJMSF008H07+          CCCCNGGATCAGNGTTTCAAGGNGNGTTNTGCCGNGACCNTGCAATTGTCGGGAATTTGC
JMSF042I12-           CCCCAGGATCAGTGTTTCAAGGCGTGTTCTGCCGAGACCTTGCAATTGTCGGGAATTTGC
                      ____________________________________________________________
consensus             CCCCAGGATCAGTGTTTCAAGGCGTGTTCTGCCGAGACCTTGCAATTGTCGGGAATTTGC
 
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rJMFF013D21+          TATCTCAATCAGGGTTTAATCGTCCGCTCCCTGTGAAATACGAGGCGTTGAGCTGTTGAT
rJMFF039F09+          TATCTCAATCAGGGTTTAATCGTCCGCTCCCTGTGAAATACGAGGCGTTGAGCTGTTGAT
rJMSF008H07+          TATNTCNATCNGGGNTTAATNGTCCNCTCCCTGNGAAATACGNGGCGTTGAGCTGTTGAT
JMSF042I12-           TATCTCAATCAGGGTTTAATCGTCCGCTCCCTGTGAAATACGAGGCGTTGAGCTGTTGAT
                      ____________________________________________________________
consensus             TATCTCAATCAGGGTTTAATCGTCCGCTCCCTGTGAAATACGAGGCGTTGAGCTGTTGAT
 
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rJMFF013D21+          TGAGATTTTTCTGGTGGTGGATAAGCAAAGAATCTCATGATCAATCTGGTGGAAAGTTTC
rJMFF039F09+          TGAGATTTTTCTGGTGGTGGATAAGCAAAGAATCTCATGATCAATCTGGTGGAAAGTTTC
rJMSF008H07+          TGNGATTTTTNTGGGGGGGGNTAAGCAAAGAATNTCNTGATCAATNTGGGGGAAAGNTTC
JMSF042I12-           TGAGATTTTTCTGGTGGTGGATAAGCAAAGAATCTCATGATCAATCTGGTGGAAAGTTTC
                      ____________________________________________________________
consensus             TGAGATTTTTCTGGTGGTGGATAAGCAAAGAATCTCATGATCAATCTGGTGGAAAGTTTC
 
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rJMFF013D21+          TTTATTTCTTTCTTTCTTTCATGTGTTAATGTTCTTCAACTG                  
rJMFF039F09+          TTTATTTCTTTCTTTCTTTCATGTGTTAATGTTCTTCAACTGTTGGAGAATCTGATTCTG
rJMSF008H07+          TTTATTTCTTTCTTTNTTTCANGGGTTAATGTTNTTCAACTGTTGGNGAAT         
JMSF042I12-           TTTATTTCTTTCTTTCTTTCATGTGTTAATGTTCTTCAACTGTTGGAGAATCTGATTCTG
                      ____________________________________________________________
consensus             TTTATTTCTTTCTTTCTTTCATGTGTTAATGTTCTTCAACTGTTGGAGAATCTGATTCTG
 
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rJMFF039F09+          GAACAAAGACTGTACAAATGGCAAAAAAT                               
JMSF042I12-           GAACAAAGACTGTACAAATGGCAAAAAATGCTCTACTTTGCCATCCAGGAAAATTTTGTT
                      ____________________________________________________________
consensus             GAACAAAGACTGTACAAATGGCAAAAAATGCTCTACTTTGCCATCCAGGAAAATTTTGTT
 
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JMSF042I12-           ACCTACTGCAGTAGTATCTTTCTTCTGTAATTTTTTTTTTTTTTTTTTNAACCTTTTNGT
                      ____________________________________________________________
consensus             ACCTACTGCAGTAGTATCTTTCTTCTGTAATTTTTTTTTTTTTTTTTTNAACCTTTTNGT