Contig 003832:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039B20Sequence657003832 (2)ref|XP_009625617.1|179PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|778001444 (2)ref|XP_009625617.1|191PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|
JMSF041L12Sequence759003832 (2)ref|XP_009625617.1|234PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|777001444 (2)ref|XP_009781567.1|239PREDICTED: uncharacterized protein LOC104230446 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041L12+ TCTCTGTTCTGGTCCACTAAGACATGCACTGATATTGTT
                      ____________________________________________________________
consensus TCTCTGTTCTGGTCCACTAAGACATGCACTGATATTGTT
 
. : . : . : . : . : . :
JMSF041L12+ CCAGACCACCAAAGGAATTTCCACATGGCAGCTTGTTCCAGTTCCACAACCTGCCTCGGG
                      ____________________________________________________________
consensus CCAGACCACCAAAGGAATTTCCACATGGCAGCTTGTTCCAGTTCCACAACCTGCCTCGGG
 
. : . : . : . : . : . :
JMSF039B20+ TTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
JMSF041L12+ CCTTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
                      ____________________________________________________________
consensus CCTTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
 
. : . : . : . : . : . :
JMSF039B20+ TTTTCAGGGTCAGTTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
JMSF041L12+ TTTTCAGGGTCAGCTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
                      ____________________________________________________________
consensus TTTTCAGGGTCAGTTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
 
. : . : . : . : . : . :
JMSF039B20+ GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
JMSF041L12+ GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
                      ____________________________________________________________
consensus GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
 
. : . : . : . : . : . :
JMSF039B20+ GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATCTAAGATA
JMSF041L12+ GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATNTAAGATA
                      ____________________________________________________________
consensus GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATCTAAGATA
 
. : . : . : . : . : . :
JMSF039B20+ CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
JMSF041L12+ CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
                      ____________________________________________________________
consensus CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
 
. : . : . : . : . : . :
JMSF039B20+ CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
JMSF041L12+ CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
                      ____________________________________________________________
consensus CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
 
. : . : . : . : . : . :
JMSF039B20+ TGCATAACTGAACTCGACAATCTTGCATGTTCACTGCTCTCGTCCACTGGAATTTCATTG
JMSF041L12+ TGCATAACTGAACTCGACAATCTTGCACGTTCACTGCTCTCGTCCACTGGAATTTCATTG
                      ____________________________________________________________
consensus TGCATAACTGAACTCGACAATCTTGCATGTTCACTGCTCTCGTCCACTGGAATTTCATTG
 
. : . : . : . : . : . :
JMSF039B20+ TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
JMSF041L12+ TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
                      ____________________________________________________________
consensus TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
 
. : . : . : . : . : . :
JMSF039B20+ GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
JMSF041L12+ GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
                      ____________________________________________________________
consensus GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
 
. : . : . : . : . : . :
JMSF039B20+ GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
JMSF041L12+ GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
                      ____________________________________________________________
consensus GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
 
. : . : . : . : . : . :
JMSF039B20+ TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTC
JMSF041L12+ TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTCC
                      ____________________________________________________________
consensus TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTCC