Contig 003831:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS063A08Sequence633003831 (5)ref|XP_011089716.1|1e-77PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF015N17Sequence499003831 (5)ref|XP_006359586.1|4e-57PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Solanum tuber772002956 (5)ref|XP_011093273.1|2e-93PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF033L06Sequence679003831 (5)ref|XP_011089716.1|7e-88PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic699002956 (5)ref|XP_011093273.1|4e-87PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF041K23Sequence821003831 (5)ref|XP_011089716.1|1e-106PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic607002956 (5)ref|XP_009591077.1|1e-60PREDICTED: cationic amino acid transporter 9, chloroplastic [Nicotiana tomentos
JMSF043M12Sequence795003831 (5)ref|XP_011089716.1|6e-93PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic756002956 (5)ref|XP_009591077.1|8e-60PREDICTED: cationic amino acid transporter 9, chloroplastic [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041K23+ GTTAATATTGCTTTAAAACCATTTGGAGCATATGGGGTCCA
                      ____________________________________________________________
consensus GTTAATATTGCTTTAAAACCATTTGGAGCATATGGGGTCCA
 
. : . : . : . : . : . :
JMSF043M12+ ACCTT
JMSF041K23+ ATTTGAAACATCAACCTCAAAAGTTCCAACAATGATGACAATGATAACAATAACTACCTT
                      ____________________________________________________________
consensus ATTTGAAACATCAACCTCAAAAGTTCCAACAATGATGACAATGATAACAATAACTACCTT
 
. : . : . : . : . : . :
JMSF033L06+ AATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
JMSF043M12+ CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
JMSF041K23+ CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
                      ____________________________________________________________
consensus CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
 
. : . : . : . : . : . :
JMSF033L06+ TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMFS063A08+ TCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMSF043M12+ TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMSF041K23+ TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
                      ____________________________________________________________
consensus TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
 
. : . : . : . : . : . :
JMSF033L06+ TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMFS063A08+ TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMSF043M12+ TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMSF041K23+ TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
                      ____________________________________________________________
consensus TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
 
. : . : . : . : . : . :
JMSF033L06+ TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMFS063A08+ TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF015N17+ ATTAATTACATAGCTTGNTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF043M12+ TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF041K23+ TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
                      ____________________________________________________________
consensus TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
 
. : . : . : . : . : . :
JMSF033L06+ AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMFS063A08+ AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF015N17+ AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF043M12+ AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF041K23+ AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
                      ____________________________________________________________
consensus AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
 
. : . : . : . : . : . :
JMSF033L06+ TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMFS063A08+ TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF015N17+ TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF043M12+ TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF041K23+ TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
                      ____________________________________________________________
consensus TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
 
. : . : . : . : . : . :
JMSF033L06+ ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMFS063A08+ ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF015N17+ ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF043M12+ ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF041K23+ ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
                      ____________________________________________________________
consensus ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
 
. : . : . : . : . : . :
JMSF033L06+ GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMFS063A08+ GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF015N17+ GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF043M12+ GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF041K23+ GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
                      ____________________________________________________________
consensus GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
 
. : . : . : . : . : . :
JMSF033L06+ GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMFS063A08+ GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF015N17+ GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF043M12+ GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF041K23+ GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
                      ____________________________________________________________
consensus GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
 
. : . : . : . : . : . :
JMSF033L06+ GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMFS063A08+ GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF015N17+ GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF043M12+ GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF041K23+ GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
                      ____________________________________________________________
consensus GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
 
. : . : . : . : . : . :
JMSF033L06+ GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMFS063A08+ GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF015N17+ GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF043M12+ GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF041K23+ GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
                      ____________________________________________________________
consensus GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
 
. : . : . : . : . : . :
JMSF033L06+ TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC
JMFS063A08+ TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC
JMSF015N17+ TTTATTTCCCGATGATCTCTC
JMSF043M12+ TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC
JMSF041K23+ TTTATTTCCCGATGATCTCTCAATGCTGTCTTCACGGAAGTCAGCAGCAGATATTTCGAC
                      ____________________________________________________________
consensus TTTATTTCCCGATGATCTCTCAATGCTGTCTTCACGGAAGTCAGCAGCAGATATTTCGAC