| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032G08 | Sequence | 544 | 003827 (8) | ref|XP_009590366.1| | 8e-73 | PREDICTED: mitotic checkpoint protein BUB3.1 [Nicotiana tomentosiformis] | 678 | 009271 (5) | emb|CDO97272.1| | 2e-115 | unnamed protein product [Coffea canephora] |
| JMFF036C17 | Sequence | 562 | 003827 (8) | ref|XP_006346313.1| | 7e-87 | PREDICTED: mitotic checkpoint protein BUB3.1-like [Solanum tuberosum] | 667 | 003827 (8) | gb|KJB79447.1| | 8e-113 | hypothetical protein B456_013G050200 [Gossypium raimondii] |
| JMFN033J03 | Sequence | 622 | 003827 (8) | ref|XP_009590366.1| | 3e-142 | PREDICTED: mitotic checkpoint protein BUB3.1 [Nicotiana tomentosiformis] | |||||
| JMSF040N17 | Sequence | 649 | 003827 (8) | ref|XP_004230702.1| | 4e-97 | PREDICTED: mitotic checkpoint protein BUB3.1 [Solanum lycopersicum] | 885 | 003827 (8) | ref|XP_002527504.1| | 1e-84 | mitotic checkpoint protein bub3, putative [Ricinus communis] gb|EEF34902.1| mito |
| JMSF053G05 | Sequence | 693 | 003827 (8) | ref|XP_006346313.1| | 1e-115 | PREDICTED: mitotic checkpoint protein BUB3.1-like [Solanum tuberosum] | 906 | 003827 (8) | ref|XP_004230702.1| | 9e-169 | PREDICTED: mitotic checkpoint protein BUB3.1 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF040N17- CGTTGAGCACCATAGAAA
____________________________________________________________
consensus CGTTGAGCACCATAGAAA
. : . : . : . : . : . :
rJMSF040N17- TTGCCTAAATTATACAATTGGGCCTAAAGTTTAAAAGGGACAAGATCATAGGAAGTAAAT
____________________________________________________________
consensus TTGCCTAAATTATACAATTGGGCCTAAAGTTTAAAAGGGACAAGATCATAGGAAGTAAAT
. : . : . : . : . : . :
rJMSF040N17- GCCAAACAACTGATCTGACCAGACACAATCCCTACCACTTTGCATACATGAATTTGTTAG
____________________________________________________________
consensus GCCAAACAACTGATCTGACCAGACACAATCCCTACCACTTTGCATACATGAATTTGTTAG
. : . : . : . : . : . :
rJMSF040N17- GTGAAGTGCATATGACTACCCAAAAGACAGCAGATGTGATAGTTCAGCAAACCCAGAGCT
____________________________________________________________
consensus GTGAAGTGCATATGACTACCCAAAAGACAGCAGATGTGATAGTTCAGCAAACCCAGAGCT
. : . : . : . : . : . :
rJMSF040N17- GAACGGCCAAACTTATGAATTTTAGCAACTAAAATATGTTTGGTCAGGGAGTGTCCAACT
rJMFF036C17- ACTAAAATATGTTTGGTCAGGGAGTGTCCAACT
rJMSF053G05- ATTTTAGCAACTAAAATATGTTTGGTCAGGGAGTGTCCAACT
____________________________________________________________
consensus GAACGGCCAAACTTATGAATTTTAGCAACTAAAATATGTTTGGTCAGGGAGTGTCCAACT
. : . : . : . : . : . :
rJMSF040N17- TACATAGAAGCTACGTTTAAACAGTTGGTCTTTACAATTTTAAGCAGATTTTTCAATTTA
rJMFF036C17- TACATAGAAGCTACGTTTAAACAGTTGGTCTTTACAATTTTAAGCAGATTTTTCAATTTA
rJMSF053G05- TACATAGAAGCTACGTTTAAACAGTTGGTCTTTACAATTTTAAGCAGATTTTTCAATTTA
____________________________________________________________
consensus TACATAGAAGCTACGTTTAAACAGTTGGTCTTTACAATTTTAAGCAGATTTTTCAATTTA
. : . : . : . : . : . :
rJMSF040N17- TGACAAACATCTACCAATATGCGATGAAATGTTGAACAAAAGGCGCTTGAATTCTTACAT
rJMFF036C17- TGACAAACATCTACCAATATGCGATGAAATGTTGAACAAAAGGCGCTTGAATTCTTACAT
rJMSF053G05- TGACAAACATCTACCAATATGCGATGAAATGTTGAACAAAAGGCGCTTGAATTCTTACAT
____________________________________________________________
consensus TGACAAACATCTACCAATATGCGATGAAATGTTGAACAAAAGGCGCTTGAATTCTTACAT
. : . : . : . : . : . :
rJMSF040N17- GGTGGGATTAGGTAGCAGCTTAGGCTTCGGCTTCACTTCAACTTCATTCACACTGCGCAA
rJMFF036C17- GGTGGGATTAGGTAGCAGCTTAGGCTTCGGCTTCACTTCAACTTCATTCACACTGCGCAA
rJMSF053G05- GGTGGGATTAGGTAGCAGCTTAGGCTTCGGCTTCACTTCAACTTCATTCACACTGCGCAA
____________________________________________________________
consensus GGTGGGATTAGGTAGCAGCTTAGGCTTCGGCTTCACTTCAACTTCATTCACACTGCGCAA
. : . : . : . : . : . :
rJMSF040N17- AAATATGGTATCTGGTTCGTGGGGTTTATGTCCCTCTTCAAACGTATAGCTAGATGCTAT
rJMFF036C17- AAATATGGTATCTGGTTCGTGGGGTTTATGTCCCTCTTCAAACGTATAGCTAGATGCTAT
rJMSF053G05- AAATATGGTATCTGGTTCGTGGGGTTTATGTCCCTCTTCAAACGTATAGCTAGATGCTAT
____________________________________________________________
consensus AAATATGGTATCTGGTTCGTGGGGTTTATGTCCCTCTTCAAACGTATAGCTAGATGCTAT
. : . : . : . : . : . :
rJMSF040N17- CGCCAACAGTCTACCATCTCTGCTGAATGACAAGGCTGCAATGCTCGCAGGGTATTTTGA
rJMFF036C17- CGCCAACAGTCTACCATCTCTGCTGAATGACAAGGCTGCAATGCTCGCAGGGTATTTTGA
rJMSF053G05- CGCCAACAGTCTACCATCTCTGCTGAATGACAAGGCTGCAATGCTCGCAGGGTATTTTGA
____________________________________________________________
consensus CGCCAACAGTCTACCATCTCTGCTGAATGACAAGGCTGCAATGCTCGCAGGGTATTTTGA
. : . : . : . : . : . :
rJMSF040N17- GTACTGATATAGCCTCTTTTTGTTGTTTCCATCCCACACATTAACAAAACCATCACACCC
rJMFF036C17- GTACTGATATAGCCTCTTTTTGTTGTTTCCATCCCACACATTAACAAAACCATCACACCC
rJMSF053G05- GTACTGATATAGCCTCTTTTTGTTGTTTCCATCCCACACATTAACAAAACCATCACACCC
JMFN033J03+ ATTAACAAAACCATCACACCC
____________________________________________________________
consensus GTACTGATATAGCCTCTTTTTGTTGTTTCCATCCCACACATTAACAAAACCATCACACCC
. : . : . : . : . : . :
rJMSF040N17- CCCAGTGGCAAAAGTGCCATAGATAGGGTGAAATGCAATGGCATTTACTGGGTAGACTAT
rJMFF036C17- CCCAGTGGCAAAAGTGCCATAGATAGGGTGAAATGCAATGGCATTTACTGGGTAGACTAT
rJMSF053G05- CCCAGTGGCAAAAGTGCCATAGATAGGGTGAAATGCAATGGCATTTACTGGGTAGACTAT
JMFN033J03+ CCCAGTGGCAAAAGTGCCATAGATAGGGTGAAATGTAATGGCATTTACTGGGTAGACTAT
____________________________________________________________
consensus CCCAGTGGCAAAAGTGCCATAGATAGGGTGAAATGCAATGGCATTTACTGGGTAGACTAT
. : . : . : . : . : . :
rJMSF040N17- ATCCCTTCCAGCTTCAGATTTTCGATGACATTTGAATGCATATTTCTTGATTTGACCAGC
rJMFF036C17- ATCCCTTCCAGCTTCAGATTTTCGATGACATTTGAATGCATATTTCTTGATTTGACCAGC
rJMSF053G05- ATCCCTTCCAGCTTCAGATTTTCGATGACATTTGAATGCATATTTCTTGATTTGACCAGC
JMFN033J03+ ATCCCTTCCAGCTTCAGATTTTCGATGACATTTGAATGCATATTTCTTGATTTGACCAGC
____________________________________________________________
consensus ATCCCTTCCAGCTTCAGATTTTCGATGACATTTGAATGCATATTTCTTGATTTGACCAGC
. : . : . : . : . : . :
rJMSF040N17- ATCAGAGAGATCAAAAAATTCCATTGCAACACGGGCCTTCAACTGAACTAAGAGCATAAC
rJMFF036C17- ATCAGAGAGATCAAAAAATTCCATTGCAACAC-GGCCTTCAACTGAACTAAGAGCATAAC
rJMSF053G05- ATCAGAGAGATCAAAAAATTCCATTGCAACAC-GGCCTTCAACTGAACTAAGAGCATAAC
JMFN033J03+ ATCAGAGAGATCAAAAAATTCCATTGCAACAC-GGCCTTCAACTGAACTAAGAGCATAAC
____________________________________________________________
consensus ATCAGAGAGATCAAAAAATTCCATTGCAACAC-GGCCTTCAACTGAACTAAGAGCATAAC
. : . : . : . : . : . :
rJMSF040N17- CAGTTCCATTAGGATAACAGCGCACACATCTTGTCTGGTATTTGAGTGAAGACTCCCTCC
rJMFF036C17- CAGTTCCATTAGGATAACAGCGCACACATCTTGTCTGGTATTTGAGTGAAGACTCCCTCC
rJMSF053G05- CAGTTCCATTAGGATAACAGCGCACACATCTTGTCTGGTATTTGAGTGAAGACTCCCTCC
JMFN033J03+ CAGTTCCATTAGGATAACAGCGCACACATCTTGTCTGGTATTTGAGTGAAGACTCCCTCC
JMSF053G05+ TCC
____________________________________________________________
consensus CAGTTCCATTAGGATAACAGCGCACACATCTTGTCTGGTATTTGAGTGAAGACTCCCTCC
. : . : . : . : . : . :
rJMSF040N17- GCTGTTCAGGTTGAGACATGTTCCGCA
rJMFF036C17- GCTGTTCANGTTGAGACATGTTCCGCAAATCATAG
rJMSF053G05- GCTGTTCAGGTTGAGACATGTTCCGCAAATCATAGACATTTACATGCCTTCCAGCAGTTG
JMFN033J03+ GCTGTTCAGGTTGAGACATGTTCCGCAAATCATAGACATTTACATGCCTTCCAGCAGTTG
JMSF053G05+ GCTGTTCAGGTTGAGACATGTTCCGCAAATCATAGACATTTACATGCCTTCCAGCAGTTG
____________________________________________________________
consensus GCTGTTCAGGTTGAGACATGTTCCGCAAATCATAGACATTTACATGCCTTCCAGCAGTTG
. : . : . : . : . : . :
rJMSF053G05- CTACAACTAAACGGTTGCCAACTAGAGACAAGGAATAAACCCTCTCTGGTTGTGCATAGG
JMFN033J03+ CTACAACTAAACGGTTGCCAACTAGAGACAAGGAATAAACCCTCTCTGGTTGTGCATAGG
JMSF053G05+ CTACAACTAAACGGTTGCCAACTAGAGACAAGGAATAAACCCTCTCTGGTTGTGCATAGG
JMFF036C17+ TGTGCATAGG
JMSF040N17+ CGGTTGCCAACTAGAGACAAGGAATAAACCCTCTCTGGTTGTGCATAGG
____________________________________________________________
consensus CTACAACTAAACGGTTGCCAACTAGAGACAAGGAATAAACCCTCTCTGGTTGTGCATAGG
. : . : . : . : . : . :
rJMSF053G05- TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
JMFN033J03+ TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
JMSF053G05+ TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
JMFF036C17+ TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
JMFF032G08+ GATCCCAGCACTTCAAGGTTT
JMSF040N17+ TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
____________________________________________________________
consensus TCCCAACAAGAGTATGCTCTTGTCCGCTTGCTCCTCTAGGATCCCAGCATTTCAAGGTTT
. : . : . : . : . : . :
rJMSF053G05- TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
JMFN033J03+ TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
JMSF053G05+ TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
JMFF036C17+ TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
JMFF032G08+ TATCCCAACTACCAGTGATCACTTGTCCAGTGTATGAGTATTCAACACAGCGAACAGGTG
JMSF040N17+ TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
____________________________________________________________
consensus TATCCCAACTACCAGTGATCACTTGTCCAGTATATGAGTACTCAACACAGCGAACAGGTG
. : . : . : . : . : . :
rJMSF053G05- CATCATGCTTTCC
JMFN033J03+ CATCATGCTTTCCCAAAATATCATCCCTTCCATAATTGAACACAAGCCTTCTAACAGTAT
JMSF053G05+ CATCATGCTTTCCCAAAATATCATCCCTTCCATAATTGAGCACAAGCCTTCTAACAGTAT
JMFF036C17+ CATCATGCTTTCCCAAAATATCATCCCTTCCATAATTGAACACAAGCCTTCTAACAGTAT
JMFF032G08+ CATCATGCTTCCCCAAAATATCATCCCTTCCATAATTGAATACAAGCCTTCTAACAGTAT
JMSF040N17+ CATCATGCTTTCCCAAAATATCATCCCTTCCATAATTGAACACAAGCCTTCTAACAGTAT
____________________________________________________________
consensus CATCATGCTTTCCCAAAATATCATCCCTTCCATAATTGAACACAAGCCTTCTAACAGTAT
. : . : . : . : . : . :
JMFN033J03+ TATCAATACTAGCACTGAAGCCCGAAGAATCGTCGTGGAAGCAACAGTCGAGCACGGCAC
JMSF053G05+ TATCAATACTAGCACTGAAGCCCGAAGAATCGTCGTGGAAGCAACAGTCGAGCACGGCAC
JMFF036C17+ TATCAATACTAGCACTGAAGCCCGAAGAATCGTCGTGGAAGCAACAGTCGAGCACGGCAC
JMFF032G08+ TATCAGTACTGGCACTGAAGCCTGAAGAATCGTCATGGAAACAACAGTCAAGCACCGCGC
JMSF040N17+ TATCAATACTAGCACTGAAGCCCGAAGAATCGTCGTGGAAGCAACAGTCGAGCACGGCAC
____________________________________________________________
consensus TATCAATACTAGCACTGAAGCCCGAAGAATCGTCGTGGAAGCAACAGTCGAGCACGGCAC
. : . : . : . : . : . :
JMFN033J03+ CG
JMSF053G05+ CGCCGTGCAGGAATTCTCCTCTCAACACATTGGCGCTTGCATCGTACAGTCTTACGGTCT
JMFF036C17+ CGCCGTGCAGGAATTCTCCTCTCAACACATTGGCGCTTGCATCGTACAGTCTTACGGTCT
JMFF032G08+ CTCCGTGAACGAACGTTCCTCTCAGCGCATTAGCGCTAGCATCGTACAATCGAACAGTCT
JMSF040N17+ CGCCGTGCAGGAATTCTCCTCTCAACACATTGGCGCTTGCATCGTACAGTCTTACGGTCT
____________________________________________________________
consensus CGCCGTGCAGGAATTCTCCTCTCAACACATTGGCGCTTGCATCGTACAGTCTTACGGTCT
. : . : . : . : . : . :
JMSF053G05+ TATCCCAGGAAGAGACGAGGAGGTGATCGCTGTGGTTGGAGAAGCGGAGGTTGGATATTC
JMFF036C17+ TATCCCAGGAAGAGACGAGGAGGTGATCGCTGTGGTTGGAGAAGCGGAGGTTGGATATTC
JMFF032G08+ TATCCCAGGAAGACACGAGGAGCTGATCGCTGTGGTTGGAGAAGCGAAGGTTGGATATGC
JMSF040N17+ TATCCCAGGAAGAGACGAGGAGGTGATCGCTGTGGTTGGAGAAGCGGAGGTTGGATATTC
____________________________________________________________
consensus TATCCCAGGAAGAGACGAGGAGGTGATCGCTGTGGTTGGAGAAGCGGAGGTTGGATATTC
. : . : . : . : . : . :
JMSF053G05+ CGTCCGTCGGAGGATTCGATAGCTCCCGTCC
JMFF036C17+ CGTCCGTCGGAGGATTCGATAGCTCCCGTCC
JMFF032G08+ CGTCATTCGGAGGATCCGACAGCTCACGTCC
JMSF040N17+ CGTCCGTCGGAGGATTCGATAGCTCCCGTCCGGCTGAGAGTGTCACCGCCGTCATGATGT
____________________________________________________________
consensus CGTCCGTCGGAGGATTCGATAGCTCCCGTCCGGCTGAGAGTGTCACCGCCGTCATGATGT
. : . : . : . : . : . :
JMSF040N17+ TGTCGGTTTTCCGCTCAGTTAAGCAATCGATGGTTTTCCACTTTTCCGATCAAAGTGAGA
____________________________________________________________
consensus TGTCGGTTTTCCGCTCAGTTAAGCAATCGATGGTTTTCCACTTTTCCGATCAAAGTGAGA
. : . : . : . : . : . :
JMSF040N17+ GCAGTGATTGAAAGAGAGAAATTTGGGGGGAAGGGAGTTTGAAATCAAAGTTGGAAATCC
____________________________________________________________
consensus GCAGTGATTGAAAGAGAGAAATTTGGGGGGAAGGGAGTTTGAAATCAAAGTTGGAAATCC
. : . : . : . : . : . :
JMSF040N17+ AATCAAGTGAGTGAGGTTACTATATCCACAAAATTTAAATTTAAACTTAGATTCTACTCC
____________________________________________________________
consensus AATCAAGTGAGTGAGGTTACTATATCCACAAAATTTAAATTTAAACTTAGATTCTACTCC