Contig 003826: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF014N06- ACATCAACATTAGCATAGGCCAACGAAAAAA
rJMFF022N22- AAATTAATCACTTCACTTCAACTTCAACATCAACATTAGCATAGGCCAACGAAAAAA
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consensus AAATTAATCACTTCACTTCAACTTCAACATCAACATTAGCATAGGCCAACGAAAAAA
. : . : . : . : . : . :
rJMSF014N06- AAAANGGGGGGGAAATCTACCTATTTACATGATTTGAGTCTAGAAAAAAGGAAAATATTC
rJMFF022N22- AAAA-GGGGGGGAAATCTACCTATTTACATGATTTGAGTCTANAAAAAAGGAAAATATTC
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consensus AAAANGGGGGGGAAATCTACCTATTTACATGATTTGAGTCTAGAAAAAAGGAAAATATTC
. : . : . : . : . : . :
rJMSF014N06- AACACCGAATACAACACTCNCCATCTAATCTAANAGTTAATAAAAGGCANAAGCAATANG
rJMFF022N22- AACACCGAATACAACACTCACCATCTAATCTAANAGTTAATAAAAGGCANAAGCAATATG
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consensus AACACCGAATACAACACTCACCATCTAATCTAANAGTTAATAAAAGGCANAAGCAATATG
. : . : . : . : . : . :
rJMSF014N06- GGAAATATTTTTTTTTCTTTTTGCAAAAAAAGTTGANATCGAATTACCGTACNCTTGTAC
rJMFF022N22- GGAAATATTTTTTTTTCTTTTTGCAAAAAAAGTTGANATCGAATTACCGNACTCTTGTAC
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consensus GGAAATATTTTTTTTTCTTTTTGCAAAAAAAGTTGANATCGAATTACCGTACTCTTGTAC
. : . : . : . : . : . :
rJMSF014N06- NANAACTTATCANCATTCTTTGATACNATCAGNCCGGNGCTNGGCGATNCNCNGGGGGGC
rJMFF022N22- NANAACTTATCATCATTCTTTGATACNATCAGNCCGGNGCTTGGCGATACTCTGGNGGGC
rJMSF040M19- AACTTATCATCATTCTTTGATACGATCAGTCCGGTGCTTGGCGATACTCTGGTGGGC
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consensus NANAACTTATCATCATTCTTTGATACGATCAGTCCGGTGCTTGGCGATACTCTGGTGGGC
. : . : . : . : . : . :
rJMSF014N06- TTTGCTTCCNCCGCCNTTTCCNCTACTANAGCTNCCGGATTCCTTCTTCGGTNGNGAANA
rJMFF022N22- TTTGCTTCCACCGCCATTTCCACTACTAAAGCTACCGGATTCCTTCTTCGGTTGNGAAAA
rJMSF040M19- TTTGCTTCCACCGCCATTTCCACTACTAGAGCTACCGGATTCCTTCTTCGGTTGTGAAGA
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consensus TTTGCTTCCACCGCCATTTCCACTACTAGAGCTACCGGATTCCTTCTTCGGTTGTGAAGA
. : . : . : . : . : . :
rJMSF014N06- AAAAAATAANGGGAANCCAAAAACNCCANACTTANAANANCCCCNGAGNGAACAAACNGG
rJMFF022N22- AAAAAATAAAGGGAATCCAAAAACNCCAAACTTAAAAAANCCCCTGAGNGAACAAACAGG
rJMSF040M19- AGAAAATAAAGGGAATCCAAAAACACCAGACTTAGAAGAGCCCCTGAGTGAACAAACAGG
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consensus AAAAAATAAAGGGAATCCAAAAACACCAGACTTAGAAGAGCCCCTGAGTGAACAAACAGG
. : . : . : . : . : . :
rJMSF014N06- AACGTTTANAACCGGAGNGACNCGAACGTTTGCCGAGTAANACCGC
rJMFF022N22- AACGTTTAAAACCGGAGNGACNCNAACGTTTGCCGAGTAAAACCGCTCCATTCCTCTGNG
rJMSF040M19- AACGTTTAGAACCGGAGTGACACGAACGTTTGCCGAGTAAGACCGCTCCATTCCTCTGTG
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consensus AACGTTTAGAACCGGAGTGACACGAACGTTTGCCGAGTAAGACCGCTCCATTCCTCTGTG
. : . : . : . : . : . :
rJMFF022N22- CTTGTATCTGGGACCACCATTGAAACTGCTTGGACTACTTGAGCTTCTCTCCAAGCTGNG
rJMSF040M19- CTTGTATCTGGGACCACCATTGAAACTGCTTGGACTACTTGAGCTTCTCTCCAAGCTGTG
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consensus CTTGTATCTGGGACCACCATTGAAACTGCTTGGACTACTTGAGCTTCTCTCCAAGCTGTG
. : . : . : . : . : . :
rJMFF022N22- AAAAACNATTTTCCCGGATGAGTTCATGCGNGGACTATCGACAGANACACCACGGAGT
rJMSF040M19- AAAAACGATTTTCCCGGATGAGTTCATGCGTGGACTATCGACAGAGACACCACGGAGTGT
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consensus AAAAACGATTTTCCCGGATGAGTTCATGCGTGGACTATCGACAGAGACACCACGGAGTGT
. : . : . : . : . : . :
rJMSF040M19- CGTGGAGGTAGTAGCTTCTGCTGCTCTCCGCATTGGGCTTCGGCCCACTCGCGAGGCGGT
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consensus CGTGGAGGTAGTAGCTTCTGCTGCTCTCCGCATTGGGCTTCGGCCCACTCGCGAGGCGGT
. : . : . : . : . : . :
rJMSF040M19- GGGATTCTCGGATGATAACGCCCTCGGCTTCACCACACGAACTCGAGGAGGATTGATATT
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consensus GGGATTCTCGGATGATAACGCCCTCGGCTTCACCACACGAACTCGAGGAGGATTGATATT
. : . : . : . : . : . :
rJMSF040M19- TTGACTTGCACTGCGAGTGTGACCATTTGGTTTCTCGGAATCGAGGGATAGACGGGGGAG
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consensus TTGACTTGCACTGCGAGTGTGACCATTTGGTTTCTCGGAATCGAGGGATAGACGGGGGAG
. : . : . : . : . : . :
rJMSF040M19- ATCGTCGTGCTCGTGCCCGGAAGAAGATGAAGACAGTGATAACCTGGAGGAAACCGATAC
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consensus ATCGTCGTGCTCGTGCCCGGAAGAAGATGAAGACAGTGATAACCTGGAGGAAACCGATAC
. : . : . : . : . : . :
rJMSF040M19- CGACTCGTTGTCGGAGTCCTTTAGCAAAGGCTGGCTGAGCGACGCGTCAATAGATGTGTG
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consensus CGACTCGTTGTCGGAGTCCTTTAGCAAAGGCTGGCTGAGCGACGCGTCAATAGATGTGTG
. : . : . : . : . : . :
rJMSF040M19- CAGAGATTTTGAACTACGGTGTAGGAAATTTTTCAGAGATTTATGTCCGTTGTTGCCCTG
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consensus CAGAGATTTTGAACTACGGTGTAGGAAATTTTTCAGAGATTTATGTCCGTTGTTGCCCTG
. : . : . : . : . : . :
rJMSF040M19- CAAGGAGGAAGAAGATGTCTTCTGAGTATCCTGCTTTGCATTGCTGTTCTGGTAGAGTTT
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consensus CAAGGAGGAAGAAGATGTCTTCTGAGTATCCTGCTTTGCATTGCTGTTCTGGTAGAGTTT
. : . : . : . : . : . :
rJMSF040M19- CTTCAGTCCTAGAAGCTCCTTCCACCGACTGGAACACCTAGGTGCCTTTGGAGAGAAGAG
JMSF040M19+ ACCGACTGGAACACCTAGGTGCCTTTGGAGAGAAGAG
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consensus CTTCAGTCCTAGAAGCTCCTTCCACCGACTGGAACACCTAGGTGCCTTTGGAGAGAAGAG
. : . : . : . : . : . :
rJMSF040M19- GTATGGATCCGTACCGCAAATCTCATTTCTGA
JMSF040M19+ GTATGGATCCGTACCGCAAATCTCATTTCTGATTCGCAGTTTGGGCGTATCCGGCGATCT
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consensus GTATGGATCCGTACCGCAAATCTCATTTCTGATTCGCAGTTTGGGCGTATCCGGCGATCT
. : . : . : . : . : . :
JMFF022N22+ CGTTGGCATGGCTGCTGACGTCGCCACTGGGCGGATCATCGAGAGCTG
JMSF014N06+ GATCATCGAGAGCTG
JMSF040M19+ AACCTCCATAGACGTTGGCATGGCTGCTGACGTCGCCACTGGGCGGATCATCGAGAGCTG
____________________________________________________________
consensus AACCTCCATAGACGTTGGCATGGCTGCTGACGTCGCCACTGGGCGGATCATCGAGAGCTG
. : . : . : . : . : . :
JMFF022N22+ TAGCGGCACGAGCTTTCCGTCAGAGAAGAGCTCGTCCGCCGGAAGCATAATGGCCGGATC
JMSF014N06+ TAGCGGCACGAGCTTTCCGTCAGAGAAGAGCTCGTCCGCCGGAAGCATAATGGCCGGATC
JMSF040M19+ TAGCGGCACGAGCTTTCCGTCAGAGAAGAGCTCGTCCGCCGGAAGCATAATGGCCGGATC
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consensus TAGCGGCACGAGCTTTCCGTCAGAGAAGAGCTCGTCCGCCGGAAGCATAATGGCCGGATC
. : . : . : . : . : . :
JMFF022N22+ GTCGAGGCGGGACTCGAAATCTCCTACATCTTTGGCGGGATCTGAGTCCTCGAGCTTATC
JMSF014N06+ GTCGAGGCGGAACTCGAAATCTCCTACATCTTTGGCGGGATCTGAGTCCTCGAGCTTATC
JMSF040M19+ GTCGAGGCGGAACTCGAAATCTCCTACATCTTTGGCGGGATCTGAGTCCTCGAGCTTATC
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consensus GTCGAGGCGGAACTCGAAATCTCCTACATCTTTGGCGGGATCTGAGTCCTCGAGCTTATC
. : . : . : . : . : . :
JMFF022N22+ GTCAGCGGCACACTTGTCCGGCAACAGAGAAGAATGCTTAGGTCCGGCAGTGTTTGTGGA
JMSF014N06+ GTCAGCGGCACACTTGTCCGGCAACAGAGAAGAATGCTTAGGTCCGGCAGTGTTTGTGGA
JMSF040M19+ GTCAGCGGCACACTTGTCCGGCAACAGAGAAGAATGCTTAGGTCCGGCAGTGTTTGTGGA
____________________________________________________________
consensus GTCAGCGGCACACTTGTCCGGCAACAGAGAAGAATGCTTAGGTCCGGCAGTGTTTGTGGA
. : . : . : . : . : . :
JMFF022N22+ GTCCGAGTCGGCCGGAAACTCCCGACTGTAGGAAACTCGCGGACTCAACCAACCATAGGA
JMSF014N06+ GTCCGAGTCGGCCGGAAACTCCCGACTGTAGGAAACTCGCGGACTCAACCAACCATAGGA
JMSF040M19+ GTCCGAGTCGGCCGGAAACTCCCGACTGTAGGAAACTCGCGGACTCAACCAACCATAGGA
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consensus GTCCGAGTCGGCCGGAAACTCCCGACTGTAGGAAACTCGCGGACTCAACCAACCATAGGA
. : . : . : . : . : . :
JMFF022N22+ CTGGTACTTAGGCGGAGGACAGTCGAGAAAGGATTCGGGCGACATTCCAATGGTGTTGAC
JMSF014N06+ CTGGTACTTAGGCGGAGGACAGTCGAGAAAGGATTCGGGCGACATTCCAATGGTGTTGAC
JMSF040M19+ CTGGTACTTAGGCGGAGGACAGTCGAGAAAGGATTCGGGCGACATTCCAATGGTGTTGAC
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consensus CTGGTACTTAGGCGGAGGACAGTCGAGAAAGGATTCGGGCGACATTCCAATGGTGTTGAC
. : . : . : . : . : . :
JMFF022N22+ GCAGGCGGACGCCATGGCTGGCTCTCATTCAACTTCTTGTTATCGGCTGAAAAGCAAGAC
JMSF014N06+ GCAGGCGGACGCCATGGCTGGCTCTCATTCAACTTCTTGTTATCGGCTGAAAAGCAAGAC
JMSF040M19+ GCAGGCGGACGCCATGGCTGGCTCTCATTCAACTTCTTGTTATCGGCTGAAAAGCAAGAC
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consensus GCAGGCGGACGCCATGGCTGGCTCTCATTCAACTTCTTGTTATCGGCTGAAAAGCAAGAC
. : . : . : . : . : . :
JMFF022N22+ AATGAATGGTGTAGACTATAATAAACAAGATATGAAAGGGAATCTCAATCACCTTGAAAA
JMSF014N06+ AATGAATGGTGTAGACTATAATAAACAAGATATGAAAGGGAATCTCAATCACCTTGAAAA
JMSF040M19+ AATGAATGGTGTAGACTATAATAAACAAGATATGAAAGGGAATCTCAATCACCTTGAAAA
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consensus AATGAATGGTGTAGACTATAATAAACAAGATATGAAAGGGAATCTCAATCACCTTGAAAA
. : . : . : . : . : . :
JMFF022N22+ TGCAGAGATATATATTATAAATATAGTATGTGCAGT
JMSF014N06+ TGCAGAGATATATATTATAAATATAGTATGTGCAGTATTGTCACGGC
JMSF040M19+ TGCAGAGATATATATTATAAATATAGTATGTGCAGTATTGTCACGGCGAGCTAGCCGCCC
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consensus TGCAGAGATATATATTATAAATATAGTATGTGCAGTATTGTCACGGCGAGCTAGCCGCCC