Contig 003818:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005H12Sequence607003818 (3)ref|XP_009763054.1|7e-83PREDICTED: F-box protein PP2-B10-like [Nicotiana sylvestris]
JMSF040C06Sequence670003818 (3)ref|XP_009763054.1|1e-88PREDICTED: F-box protein PP2-B10-like [Nicotiana sylvestris]811003818 (3)ref|XP_004237494.1|4e-88PREDICTED: F-box protein PP2-B10-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040C06- GCCTGATCTCAATCCCTTGCACAATGATGCCGCCCTTAGGCTGCCCACC
                      ____________________________________________________________
consensus GCCTGATCTCAATCCCTTGCACAATGATGCCGCCCTTAGGCTGCCCACC
 
. : . : . : . : . : . :
rJMSF040C06- ATGCACCTCCATCAAACTAATCTCTACCCAGTCTTCTTCTTCACTACCTCTGATGAAAAT
                      ____________________________________________________________
consensus ATGCACCTCCATCAAACTAATCTCTACCCAGTCTTCTTCTTCACTACCTCTGATGAAAAT
 
. : . : . : . : . : . :
rJMSF040C06- CTCTCCCAATTCAACTTCCATCCATTTATCGCCTCTCCCCTTTGGGTGTTCGCCATCTGG
                      ____________________________________________________________
consensus CTCTCCCAATTCAACTTCCATCCATTTATCGCCTCTCCCCTTTGGGTGTTCGCCATCTGG
 
. : . : . : . : . : . :
rJMSF040C06- GGGTGGATTCGCGTTTTGTCCAGTTTGGCGATGACCAAGTTGCCCCATTCGCCATGACCT
                      ____________________________________________________________
consensus GGGTGGATTCGCGTTTTGTCCAGTTTGGCGATGACCAAGTTGCCCCATTCGCCATGACCT
 
. : . : . : . : . : . :
rJMSF040C06- CTCCGCTTCATCCGGATCCAATTCCCACGGACCAAGCTTGGTTCTTGGCCTTACCAGCAC
JMSF040C06+ TTACCAGCAC
                      ____________________________________________________________
consensus CTCCGCTTCATCCGGATCCAATTCCCACGGACCAAGCTTGGTTCTTGGCCTTACCAGCAC
 
. : . : . : . : . : . :
rJMSF040C06- TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
JMFN005H12+ GGCCGATAATCCTGACTAA
JMSF040C06+ TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
                      ____________________________________________________________
consensus TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
 
. : . : . : . : . : . :
rJMSF040C06- AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
JMFN005H12+ AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
JMSF040C06+ AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
                      ____________________________________________________________
consensus AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
 
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rJMSF040C06- TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
JMFN005H12+ TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
JMSF040C06+ TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
                      ____________________________________________________________
consensus TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
 
. : . : . : . : . : . :
rJMSF040C06- CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
JMFN005H12+ CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
JMSF040C06+ CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
                      ____________________________________________________________
consensus CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
 
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rJMSF040C06- CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
JMFN005H12+ CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
JMSF040C06+ CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
                      ____________________________________________________________
consensus CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
 
. : . : . : . : . : . :
rJMSF040C06- ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
JMFN005H12+ ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
JMSF040C06+ ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
                      ____________________________________________________________
consensus ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
 
. : . : . : . : . : . :
rJMSF040C06- GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
JMFN005H12+ GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
JMSF040C06+ GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
                      ____________________________________________________________
consensus GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
 
. : . : . : . : . : . :
rJMSF040C06- GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
JMFN005H12+ GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
JMSF040C06+ GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
                      ____________________________________________________________
consensus GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
 
. : . : . : . : . : . :
rJMSF040C06- GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAG
JMFN005H12+ GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
JMSF040C06+ GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
                      ____________________________________________________________
consensus GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
 
. : . : . : . : . : . :
JMFN005H12+ CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
JMSF040C06+ CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
                      ____________________________________________________________
consensus CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
 
. : . : . : . : . : . :
JMFN005H12+ ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTG
JMSF040C06+ ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTGGGATAGTCGGAC
                      ____________________________________________________________
consensus ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTGGGATAGTCGGAC