Contig 003811: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMFN020D11+ TGGTACGCAGGTTTCCAGTCCGACGTGTAACG
____________________________________________________________
consensus TGGTACGCAGGTTTCCAGTCCGACGTGTAACG
. : . : . : . : . : . :
JMFN020D11+ CGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGT
____________________________________________________________
consensus CGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGT
. : . : . : . : . : . :
JMFN020D11+ TTTTTTTTTTNTNTNTGCAGAACAGAGCAAGGATGAGAACCTTACATATATTTAAAAGAT
rJMSF041C20- AAGAT
____________________________________________________________
consensus TTTTTTTTTTNTNTNTGCAGAACAGAGCAAGGATGAGAACCTTACATATATTTAAAAGAT
. : . : . : . : . : . :
JMFN020D11+ TTCAGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
rJMSF041C20- TTCAGAGGAACCAACTCACTGGATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
rJMSF039C20- AGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
JMFN038H21+ GTGCATAT
JMSF039C20+ AGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
____________________________________________________________
consensus TTCAGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
. : . : . : . : . : . :
JMFN020D11+ TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
rJMSF041C20- TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
rJMSF039C20- TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
JMFN038H21+ TGGGGAACTTCGCAATCACTAAAACTAGTTCCGCAAGTGTATTGAAGAAAAGCATTGGAT
JMSF039C20+ TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
____________________________________________________________
consensus TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
. : . : . : . : . : . :
JMFN020D11+ GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
rJMSF041C20- GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
rJMSF039C20- GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
JMFN038H21+ GTTCGTAATCAGTTGTATGCGAGGCTATCAAGTACAAATCCACAGGCACAACTGTTAGGA
JMSF039C20+ GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
____________________________________________________________
consensus GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
. : . : . : . : . : . :
JMFN020D11+ ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
rJMSF041C20- ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
rJMSF039C20- ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
JMFN038H21+ ATTTTTTATTGCGAGTGAGTTGCTTGCCATGGTATATTTGCTCCCACCAAGTCAACCGAT
JMSF039C20+ ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
____________________________________________________________
consensus ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
. : . : . : . : . : . :
JMFN020D11+ TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
rJMSF041C20- TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
rJMSF039C20- TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
JMFN038H21+ TGTACATTCCCTAGGTCATCAGCAAATGGGGTTCCTTTCTTTCAATGAAAGAAATGATAA
JMSF039C20+ TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
____________________________________________________________
consensus TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
. : . : . : . : . : . :
JMFN020D11+ GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
rJMSF041C20- GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
rJMSF039C20- GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
JMFN038H21+ GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
JMSF039C20+ GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
____________________________________________________________
consensus GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
. : . : . : . : . : . :
JMFN020D11+ ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
rJMSF041C20- ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
rJMSF039C20- ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
JMFN038H21+ ACGGAGAGACCGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
JMSF039C20+ ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
____________________________________________________________
consensus ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
. : . : . : . : . : . :
JMFN020D11+ GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
rJMSF041C20- GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
rJMSF039C20- GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
JMFN038H21+ GGGTACGTAACCCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
JMSF039C20+ GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
____________________________________________________________
consensus GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
. : . : . : . : . : . :
JMFN020D11+ AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATC
rJMSF041C20- AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
rJMSF039C20- AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
JMFN038H21+ AAAT
JMSF039C20+ AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
____________________________________________________________
consensus AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
. : . : . : . : . : . :
rJMSF041C20- AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
rJMSF039C20- AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
JMSF039C20+ AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
____________________________________________________________
consensus AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC