Contig 003807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006D04Sequence582003807 (4)ref|XP_010089224.1|1e-73Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Morus notab
JMFS029A07Sequence603003807 (4)ref|XP_010100830.1|1e-88Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Morus notab
JMSF038I04Sequence702003807 (4)905010044 (2)gb|AFS41246.1|2e-31cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida]
JMSF040F01Sequence663003807 (4)382015122

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+                                TGACACTTTAATCAATTCTGCTGGGGACACAATTGCATC
                      ____________________________________________________________
consensus                                  TGACACTTTAATCAATTCTGCTGGGGACACAATTGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           AATAAGACNTAATTTCTTCCCTTCTTCAGACAATATGGGTTTAGATGTCAGCATCATTTC
                      ____________________________________________________________
consensus             AATAAGACNTAATTTCTTCCCTTCTTCAGACAATATGGGTTTAGATGTCAGCATCATTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           AACACCTTTCTGCAATCCCACAAGCCTTGGAAGACGTTGTGTACCTCCAAAGCCAGGTAT
                      ____________________________________________________________
consensus             AACACCTTTCTGCAATCCCACAAGCCTTGGAAGACGTTGTGTACCTCCAAAGCCAGGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           AACCCCGAGGGTAAGTTCTGGCAATCCAAGTTGGGCTTTTGGTGCAGAAATGCGAGCATG
                      ____________________________________________________________
consensus             AACCCCGAGGGTAAGTTCTGGCAATCCAAGTTGGGCTTTTGGTGCAGAAATGCGAGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           GCATCCCAATGCCAATTCTAAGCCACCTCCAAGTGCGAGTCCTTGTATCGCAGCAACAGC
                      ____________________________________________________________
consensus             GCATCCCAATGCCAATTCTAAGCCACCTCCAAGTGCGAGTCCTTGTATCGCAGCAACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           AGGCTTTTTGCCATCTTCAATCAGGTTGACTACAAGTTCAACAGAAACATCTGGTAGTAC
JMFS006D04+                          TTCAATCAGGTTGACTACAAGTTCAACAGAAACATCTGGTAGTAC
                      ____________________________________________________________
consensus             AGGCTTTTTGCCATCTTCAATCAGGTTGACTACAAGTTCAACAGAAACATCTGGTAGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           AGAAATATCCCCATTCTTGTGAACTTGTTCAAAAACATTGATGTCAAAACCACCAGAGAA
JMFS006D04+           AGAAATATCCCCATTCTTGTGAACTTGTTCAAAAACATTGATGTCAAAACCACCAGAGAA
                      ____________________________________________________________
consensus             AGAAATATCCCCATTCTTGTGAACTTGTTCAAAAACATTGATGTCAAAACCACCAGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           TCTCCCCCCACTCCCAGTCAAAACAATAGCTTTAACATCGTTTCTCCTGGCAGCCTCCGT
JMFS006D04+           TCTCCCCCCACTCCCAGTCAAAACAATAGCTTTAACATCGTTTCTCCTGGCAGCCTCCGT
JMSF040F01+                        CCAGTCAAAACAATACCTTTAACATCGTTTCTCCTGGCAGCCTCCGT
                      ____________________________________________________________
consensus             TCTCCCCCCACTCCCAGTCAAAACAATAGCTTTAACATCGTTTCTCCTGGCAGCCTCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS029A07+           GAACTTCTCCTTCAAGCCTTGAATTA                                  
JMFS006D04+           GAACTTCTCCTTCAAGCCTTGAATTA                                  
JMSF040F01+           GAACTTCTCCTTGAAGCCATGAATTACTACAACACAATCAAATTTCACAGTTTAGTTTCA
                      ____________________________________________________________
consensus             GAACTTCTCCTTCAAGCCTTGAATTACTACAACACAATCAAATTTCACAGTTTAGTTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040F01+           TCTATCCAAATCCAGCGCATACGCACACTCGCCAGCAACGGAGCGACGATGGTCGAGACC
                      ____________________________________________________________
consensus             TCTATCCAAATCCAGCGCATACGCACACTCGCCAGCAACGGAGCGACGATGGTCGAGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040F01+           TGCTACGGGTGGCGACCAAAAGCGAGATTTTCTTCTTTACACGGTCGTCGGTCGAGTCCG
                      ____________________________________________________________
consensus             TGCTACGGGTGGCGACCAAAAGCGAGATTTTCTTCTTTACACGGTCGTCGGTCGAGTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040F01+           GCTAACGGAGATTGAAACCGGAAAAATTAAACTACGGTAGGTAGGTAAAATTTTAATAGT
JMSF038I04+                                                      GGTAAAATTCCAATAGT
                      ____________________________________________________________
consensus             GCTAACGGAGATTGAAACCGGAAAAATTAAACTACGGTAGGTAGGTAAAATTTTAATAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040F01+           TTTGAAAATAAATCAAAATTATGCTAAGGCTGAAAGGCATAATCAAAATTAACTATTGTA
JMSF038I04+           TTTGAAAATAAATCAAAATTATGCTAAGGCTGAAATGCATAATCAAAATTAACTATTGTA
                      ____________________________________________________________
consensus             TTTGAAAATAAATCAAAATTATGCTAAGGCTGAAATGCATAATCAAAATTAACTATTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040F01+           GAATCATCATGATGTTCTTCAATGGCACGAGCTTCAG                       
JMSF038I04+           GAATCATCATGATGTTCTTCAATGGCACGAGCTTCAGGGTCAGATTACCGGAAAGGCCTA
                      ____________________________________________________________
consensus             GAATCATCATGATGTTCTTCAATGGCACGAGCTTCAGGGTCAGATTACCGGAAAGGCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           ATCAACAACGCATCTTCAATTCAGCAATGCTAAGTCTGTCATTCCATCTCCATCAACAAA
                      ____________________________________________________________
consensus             ATCAACAACGCATCTTCAATTCAGCAATGCTAAGTCTGTCATTCCATCTCCATCAACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           GTAACATCTCAAGTGGTTAATTATTAGCTTCAGATTTAATTTCCCCAATAATATAATGTA
                      ____________________________________________________________
consensus             GTAACATCTCAAGTGGTTAATTATTAGCTTCAGATTTAATTTCCCCAATAATATAATGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           TATAATGCTACTTACTCATTTGCAGGAAGCTAGACGAAGGAGATATATAAGACTCTGTAT
                      ____________________________________________________________
consensus             TATAATGCTACTTACTCATTTGCAGGAAGCTAGACGAAGGAGATATATAAGACTCTGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           GTTCTTCCACCAGATCAGATAGAAGAACACCAACGTGATTGGTCTTCAGATTAGAGGAAG
                      ____________________________________________________________
consensus             GTTCTTCCACCAGATCAGATAGAAGAACACCAACGTGATTGGTCTTCAGATTAGAGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           GCGACCGTTGCCTTCTTCAGATCTGAAGAAGGCAGTCGGCGGTGACGGTGACAAAACGGA
                      ____________________________________________________________
consensus             GCGACCGTTGCCTTCTTCAGATCTGAAGAAGGCAGTCGGCGGTGACGGTGACAAAACGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           AAATTTATAGTTAATCAAAGCATAGGAGAGGAGTAAAAAGCAGAGCTGCCTAGACAGTAG
                      ____________________________________________________________
consensus             AAATTTATAGTTAATCAAAGCATAGGAGAGGAGTAAAAAGCAGAGCTGCCTAGACAGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           ACAGATCCCCTTTTGAATTGCCTCTGCAACTTCTTTTCATATTTCACATCTACAAATTAT
                      ____________________________________________________________
consensus             ACAGATCCCCTTTTGAATTGCCTCTGCAACTTCTTTTCATATTTCACATCTACAAATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           ATATCCACAGCTTTCAAAATTTTGAAATCTGTAAATTTCTCAAAATGGGCATGCTGCTAC
                      ____________________________________________________________
consensus             ATATCCACAGCTTTCAAAATTTTGAAATCTGTAAATTTCTCAAAATGGGCATGCTGCTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF038I04+           GTGCCTATTTTGATTTTTGAGACGAAAACAAAGCCCTCGTTGCTAAGATTTTTTTCACCC
                      ____________________________________________________________
consensus             GTGCCTATTTTGATTTTTGAGACGAAAACAAAGCCCTCGTTGCTAAGATTTTTTTCACCC