Contig 003799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007O06Sequence307003799 (5)ref|XP_009781148.1|3e-15PREDICTED: cellulose synthase-like protein B6 isoform X2 [Nicotiana sylvestris]769011250 (3)ref|XP_009588345.1|4e-90PREDICTED: cellulose synthase-like protein H1 [Nicotiana tomentosiformis]
JMSF018E17Sequence489003799 (5)ref|XP_009781148.1|2e-71PREDICTED: cellulose synthase-like protein B6 isoform X2 [Nicotiana sylvestris]727007667 (3)ref|XP_009605434.1|1e-74PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA [Nicotiana
JMSF037O06Sequence635003799 (5)ref|XP_009781148.1|2e-80PREDICTED: cellulose synthase-like protein B6 isoform X2 [Nicotiana sylvestris]687011250 (3)ref|XP_009781147.1|2e-75PREDICTED: cellulose synthase-like protein H1 isoform X1 [Nicotiana sylvestris]
JMSF045E12Sequence757003799 (5)ref|XP_009781148.1|9e-113PREDICTED: cellulose synthase-like protein B6 isoform X2 [Nicotiana sylvestris]
JMSF048K01Sequence700003799 (5)ref|XP_009781148.1|2e-93PREDICTED: cellulose synthase-like protein B6 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045E12+ AGC
                      ____________________________________________________________
consensus AGC
 
. : . : . : . : . : . :
JMSF045E12+ TTTGAAATGATGGGGATGCTTTGGACGCTTCTCTCTGGAGATATATATTAAATGAGGCAC
                      ____________________________________________________________
consensus TTTGAAATGATGGGGATGCTTTGGACGCTTCTCTCTGGAGATATATATTAAATGAGGCAC
 
. : . : . : . : . : . :
JMSF018E17+ TC
JMSF045E12+ ACCATCACTTTCCTTGTGCTCACAAATCACCTTTATGATGGTGGGATGGTCTCTCCGATC
                      ____________________________________________________________
consensus ACCATCACTTTCCTTGTGCTCACAAATCACCTTTATGATGGTGGGATGGTCTCTCCGATC
 
. : . : . : . : . : . :
JMSF018E17+ AATATTTGCAAAAACTGAAAACTCCCCAGTAAGTTGTTGTGGCAAAGAATCTTGACTTGC
JMSF045E12+ AATATTTGCAAAATCTGAAAGCTCGCCAACAAGGTCATGTGGCATCGACTCTTGACTTAC
                      ____________________________________________________________
consensus AATATTTGCAAAATCTGAAAGCTCGCCAGTAAGTTGTTGTGGCATCGACTCTTGACTTGC
 
. : . : . : . : . : . :
JMSF018E17+ TTCTTCTATCTTTCTACAGAGCTTTGAATATTCGTCCTTCATTTTCTTCCATTCATGTTG
JMSF045E12+ TTCATCAATCTTTTCACAGAGCTTTGAATATTCATCCTTCATTTTGTTCCACTCATGTTG
JMSF048K01+ ACAGAGCTTTGAATATTCATCCTTCATTTTGTTCCACTCATGTTG
                      ____________________________________________________________
consensus TTCTTCTATCTTTTTACAGAGCTTTGAATATTCATCCTTCATTTTGTTCCACTCATGTTG
 
. : . : . : . : . : . :
JMSF018E17+ GAAGTCTAAGGAGCTATCTGGTTGGAATGTTTGGTTGGTACTGTTAAAGTATCGAAATGG
JMSF045E12+ GAAGTCTAAGGAGCTATCTTGTGGGAAAACTGGGTTGGTACTGTTAAAGTGTCGAAACGG
JMSF048K01+ GAAGTCTANGGAGCTATCTTGTGGGAAAACTGGGTTGGTACTGTTAAAGTGTCGAAACGG
JMSF037O06+ GGTTGGTACTGTTAAAGTGTCGAAACGG
                      ____________________________________________________________
consensus GAAGTCTAAGGAGCTATCTTGTGGGAAAACTGGGTTGGTACTGTTAAAGTGTCGAAACGG
 
. : . : . : . : . : . :
JMSF018E17+ AGTTCTAACGGCAATGTTATACTTCTTACAAAAGGGAACCCAAAGCTTAGCGAACTTGGA
JMSF045E12+ AGCTCTAACGGCGACGTTATACTTCTTACAAAAGGGAACCCAAAGCTTAGCGAACTTGGA
JMSF048K01+ AGCTCTAACGGCGACGTTATACTTCTTACAAAAGGGAACCCAAAGCTTAGCGAACTTGGA
JMSF037O06+ AGCTCTAACGGCGACGTTATACTTCTTACAAAAGGGAACCCAAAGCTTAGCGAACTTGGA
                      ____________________________________________________________
consensus AGCTCTAACGGCGACGTTATACTTCTTACAAAAGGGAACCCAAAGCTTAGCGAACTTGGA
 
. : . : . : . : . : . :
JMSF018E17+ TGCTTCAACGAGGGAGTAGAAGGTGAGGGGCGATGCGCCGTCATCTGATACATAACAGGC
JMSF045E12+ TGCTTCGACGAGGGAATAGAAGGTGAGGGGGGATGCGCCGTCATCTGATACATAACAGGC
JMSF048K01+ TGCTTCGACGAGGGAATAGAAGGTGAGGGGGGATGCGCCGTCATCTGATACATAACAGGC
JMSF037O06+ TGCTTCGACGAGGGAATAGAAGGTGAGGGGGGATGCGCCGTCATCTGATACATAACAGGC
                      ____________________________________________________________
consensus TGCTTCGACGAGGGAATAGAAGGTGAGGGGGGATGCGCCGTCATCTGATACATAACAGGC
 
. : . : . : . : . : . :
JMSF018E17+ TAGCTTGTTCGCCGGATAATCCACAGCCAACAAAGATAACACCGTGTTAACCGTTATAAT
JMSF045E12+ TAGCTTGTTGGCCGGATAGTCCACAGCCAACAAAGATAATACCGTGTTAACCGTTATAAT
JMSF048K01+ TAGCTTGTTGGCCGGATAGTCCACAGCCAACAAAGATAATACCGTGTTAACCGTTATAAT
JMSF037O06+ TAGCTTGTTGGCCGGATAGTCCACAGCCAACAAAGATAATACCGTGTTAACCGTTATAAT
                      ____________________________________________________________
consensus TAGCTTGTTGGCCGGATAGTCCACAGCCAACAAAGATAATACCGTGTTAACCGTTATAAT
 
. : . : . : . : . : . :
JMSF018E17+ CGGCGGTTCCAGTTCCGGGTCGGCCGTGGTAACGAACATATCCACAGCCGGAAACTCAGA
JMSF045E12+ CGGCGGTTCCAGTTCCGGGTCGGCCGTCGTAACGAACATATCCACAGCTGGAAACTCAGA
JMSF048K01+ CGGCGGTTCCAGTTCCGGGTCGGCCGTCGTAACGAACATATCCACAGCTGGAAACTCAGA
JMSF037O06+ CGGCGGTTCCAGTTCCGGGTCGGCCGTCGTAACGAACATATCCACAGCTGGAAACTCAGA
                      ____________________________________________________________
consensus CGGCGGTTCCAGTTCCGGGTCGGCCGTCGTAACGAACATATCCACAGCTGGAAACTCAGA
 
. : . : . : . : . : . :
JMSF018E17+ TGTCCCATCTCCCAACCATTGCAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
JMSF045E12+ TGTCCCATCTCCCAACCATTGGAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
JMSF048K01+ TGTCCCATCTCCCAACCATTGGAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
JMSF007O06+ ATTGCAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
JMSF037O06+ TGTCCCATCTCCCAACCATTGGAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
                      ____________________________________________________________
consensus TGTCCCATCTCCCAACCATTGGAAGAGGCGTTGTGGGTATGTTTTGGTTTGGATTTGATT
 
. : . : . : . : . : . :
JMSF018E17+ CC
JMSF045E12+ CCACTTAGAGCTGACGACGATAATCCAAACGAAAGTGAACCAAGCCTCGCAGATTAGAGC
JMSF048K01+ CCACTTAGAGCTGACGACGATAATCCAAACGAAAGTGAACCAAGCCTCGCAGATTAGAGC
JMSF007O06+ CCACTTAGAGTTGACGAGGACAATCCAAACAAAAGTGAACCAAGCCTCGCAGGTGAGAGC
JMSF037O06+ CCACTTAGAGCTGACGACGATAATCCAAACGAAAGTGAACCAAGCCTCGCAGATTAGAGC
                      ____________________________________________________________
consensus CCACTTAGAGCTGACGACGATAATCCAAACGAAAGTGAACCAAGCCTCGCAGATTAGAGC
 
. : . : . : . : . : . :
JMSF045E12+ CAGAAGCCAAGGGATTCGGTGATGGGTGCTGAGAGAAAAGAGTCTGTAGGTAATAAGTGA
JMSF048K01+ CAGAAGCCAAGGGATTCGGTGATGGGTGCTGAGAGAAAAGAGTCTGTAGGTAATAAGTGA
JMSF007O06+ AAGAAGCCAAGGGATATGGTCATGGGTGCGGAGAGAAAAGAGTCTGTAGCTAATGAGTGA
JMSF037O06+ CAGAAGCCAAGGGATTCGGTGATGGGTGCTGAGAGAAAAGAGTCTGTAGGTAATAAGTGA
                      ____________________________________________________________
consensus CAGAAGCCAAGGGATTCGGTGATGGGTGCTGAGAGAAAAGAGTCTGTAGGTAATAAGTGA
 
. : . : . : . : . : . :
JMSF045E12+ TAGGAGAAGGAATAGGATGATGATTTCAATGG
JMSF048K01+ TAGGAGAAGGAATAGGATGATGATTTCAATGGCTCTTGATATTCTGTTGTTTCGGATTTT
JMSF007O06+ TAGCAGAAGGAATAGGATAATGATTTCTATGGTTCTTGATATTCTGTTGTTTCGAAATTG
JMSF037O06+ TAGGAGAAGGAATAGGATGATGATTTCAATGGCTCTTGATATTCTGTTGTTTCGGATTTT
                      ____________________________________________________________
consensus TAGGAGAAGGAATAGGATGATGATTTCAATGGCTCTTGATATTCTGTTGTTTCGGATTTT
 
. : . : . : . : . : . :
JMSF048K01+ TATTTCGTAAAGTGGAAAAGGAGGATGCTTGGGTGCCATGATGTATATATCTCAACATAC
JMSF007O06+ TATTTCGTAAAGTGGAAAAGGA
JMSF037O06+ TATTTCGTAAAGTGGAAAAGGAGGATGCTTGGGTGCCATGATGTATATATCTCAACATAC
                      ____________________________________________________________
consensus TATTTCGTAAAGTGGAAAAGGAGGATGCTTGGGTGCCATGATGTATATATCTCAACATAC
 
. : . : . : . : . : . :
JMSF048K01+ AAGCAGGAATAATGCTTGTGTTTCAAGTGGTGGGAGTT
JMSF037O06+ AAGCAGGAATAATGCTTGTGTTTCAAGTGGTGGGAGTTGCAGAATACAGAGTTCCCCATC
                      ____________________________________________________________
consensus AAGCAGGAATAATGCTTGTGTTTCAAGTGGTGGGAGTTGCAGAATACAGAGTTCCCCATC