Contig 003798:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G21Sequence102003798 (6)gb|KJB14633.1|5e-07hypothetical protein B456_002G134900 [Gossypium raimondii]508006264 (18)ref|XP_011074396.1|160PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum]
JMFS041H01Sequence628003798 (6)ref|XP_008220252.1|284PREDICTED: polyadenylate-binding protein 2-like [Prunus mume]
JMFS080F01Sequence626003798 (6)ref|XP_009613515.1|373PREDICTED: polyadenylate-binding protein 2-like [Nicotiana tomentosiformis]
JMFS159C04Sequence445003798 (6)ref|XP_011074396.1|250PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum]
JMSF030E18Sequence625003798 (6)ref|XP_007226962.1|2e-46hypothetical protein PRUPE_ppa002618mg [Prunus persica] ref|XP_007226963.1| hypo711005764 (2)ref|XP_004252758.1|215PREDICTED: polyadenylate-binding protein 2-like [Solanum lycopersicum]
JMSF037L23Sequence695003798 (6)ref|XP_007226962.1|7e-62hypothetical protein PRUPE_ppa002618mg [Prunus persica] ref|XP_007226963.1| hypo737005764 (2)ref|XP_004252758.1|219PREDICTED: polyadenylate-binding protein 2-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF008G21+ GTGGGCTTTCCCAAC
JMFS080F01+ GGCTTTCCCAAC
                      ____________________________________________________________
consensus GTGGGCTTTCCCAAC
 
. : . : . : . : . : . :
JMFF008G21+ ATACCATTCTTTATCATCAAATTTCTTCCCATTCAAAGCTTCGACAGCCCNGGCAGCATC
JMFS080F01+ ATACCATTCTTTATCATCAAATTTCTTCCCATTCAAAGCTTCGACAGCCCTGGCAGCATC
                      ____________________________________________________________
consensus ATACCATTCTTTATCATCAAATTTCTTCCCATTCAAAGCTTCGACAGCCCTGGCAGCATC
 
. : . : . : . : . : . :
JMFF008G21+ ATCTGCGTTCTCAAAANTGACAA
JMFS080F01+ ATCTGCGTTCTCAAAATTGACAAACCCAAAACATTTTGACTTTCCATCATCTTCCCTCAT
                      ____________________________________________________________
consensus ATCTGCGTTCTCAAAATTGACAAACCCAAAACATTTTGACTTTCCATCATCTTCCCTCAT
 
. : . : . : . : . : . :
JMFS080F01+ CACTACAGCACTAGTAATATTCCCAAATTCAGCAAAGGTTTTTGTCAGATCCTCATCTGT
                      ____________________________________________________________
consensus CACTACAGCACTAGTAATATTCCCAAATTCAGCAAAGGTTTTTGTCAGATCCTCATCTGT
 
. : . : . : . : . : . :
JMFS080F01+ TACGGATTCTGATATGTTCTTGACAAAAACATTGTAGAACTTGGTTTTATTCGTAGCAGT
                      ____________________________________________________________
consensus TACGGATTCTGATATGTTCTTGACAAAAACATTGTAGAACTTGGTTTTATTCGTAGCAGT
 
. : . : . : . : . : . :
JMFS080F01+ ATCTCTTTCCTGTTTACGAAGAAAGGGTCCAACATACACTTGTTTGTCATTAATGAGCAT
JMFS041H01+ TGTCATTCATGAGCAT
                      ____________________________________________________________
consensus ATCTCTTTCCTGTTTACGAAGAAAGGGTCCAACATACACTTGTTTGTCATTCATGAGCAT
 
. : . : . : . : . : . :
JMFS080F01+ ACCATTTAACTTATCAATGGCACTTTGAGCCGAATCTTCATTGTCAAACTGTACAAAACC
JMFS159C04+ TTTGAGCCGAATCTTCATTGTCAAACTGTACAAAACC
JMFS041H01+ TCCATTTAACTTGTCAATAGCA-TTTGAGCCGAGTCTTCATTGACAAATTGTACAAAACC
                      ____________________________________________________________
consensus TCCATTTAACTTGTCAATGGCACTTTGAGCCGAATCTTCATTGTCAAACTGTACAAAACC
 
. : . : . : . : . : . :
JMFS080F01+ GTGACCCTTAGACTGACCATTAGGATCAGTAGCTATCTTGCAAGAAAGAATGTTTCCAAA
JMFS159C04+ GTGACCCTTAGACTGACCATTAGGATCAGTAGCTATCTTGCAAGAAAGAATGTTTCCAAA
JMFS041H01+ ATAGCCTTTAGACTGCCCATTAGAATCAGTAGCTATTTTGCATGAAAGAATGTTGCCAAA
                      ____________________________________________________________
consensus GTGACCCTTAGACTGACCATTAGGATCAGTAGCTATCTTGCAAGAAAGAATGTTTCCAAA
 
. : . : . : . : . : . :
JMFS080F01+ GCTTGAAAATGTGTCATGTAAGGCCTTGTTGTCAATTGACTTGTCCAAGTTCTTAATAAA
JMFS159C04+ GCTTGAAAATGTGTCATGTAAGGCCTTGTTGTCAATTGACTTGTCCAAGTTCTTAATAAA
JMFS041H01+ ACTAGAAAAAGTGTCATGTAAGGCTTTGTTGTCAATTGATTTGTCCAAATTCTTAATAAA
JMSF037L23+ TTGTTGTCAATTGATTTGTCCAAATTCTTAATAAA
                      ____________________________________________________________
consensus GCTTGAAAATGTGTCATGTAAGGCCTTGTTGTCAATTGATTTGTCCAAGTTCTTAATAAA
 
. : . : . : . : . : . :
JMFS080F01+ TATATTTGCAGTTCCACTATTACGCAGGCTAGGGTCACGGTGAGAATGCATTATCCTAAT
JMFS159C04+ TATATTTGCAGTTCCACTCTTACGCAGGCTAGGGTCACGGTGAGAATGCATTATCCTAAT
JMFS041H01+ TATATTAGCAGTTCCACTCTTACGAAGACTAGGATCACGATGAGAATACATGATCCTAAT
JMSF030E18+ TCACGATGAGAATACATGATCCTAAT
JMSF037L23+ TATATTAGCAGTTCCACTCTTACGAAGACTAGGATCACGATGAGAATACATGATCCTAAT
                      ____________________________________________________________
consensus TATATTTGCAGTTCCACTCTTACGCAGGCTAGGGTCACGATGAGAATACATGATCCTAAT
 
. : . : . : . : . : . :
JMFS080F01+ AGACTTGCTATTGACAGGAGTGAAGTTCAATACTTCCATTGCTCTTGCAGCATCCTGAGG
JMFS159C04+ AGACTTGCTATTGACAGGAGTGAAGTTCAACCCTTCCATTGCTCTTGCAGCATCCTGAGG
JMFS041H01+ AGACTTATTATTCATAGAAGTGAAGTTCAACATCTCCATTGCCCTTGCAGCATCATGAGG
JMSF030E18+ AGACTTATTATTCATAGAAGTGAAGTTCAACATCTCCATTGCCCTTGCAGCATCCTGAGG
JMSF037L23+ AGACTTATTATTCATAGAAGTGAAGTTCAACATCTCCATTGCCCTTGCAGCATCCTGAGG
                      ____________________________________________________________
consensus AGACTTATTATTCATAGAAGTGAAGTTCAACATCTCCATTGCCCTTGCAGCATCCTGAGG
 
. : . : . : . : . : . :
JMFS080F01+ ACTGCTATAGTTGA
JMFS159C04+ ACTGCTATAGTTGACGTAGCCATAGCCGAGAGATCGGCGAGAGCTGATGTCCCGACAGAC
JMFS041H01+ GTTGGTATAGTTGACATATCCATAGCCGAGGGAACGGCGAGAGCTCATGTCGCGACAAAC
JMSF030E18+ GTTGGTATAGTTGACATATCCATAGCCGAGGGAACGGCGAGAGCTCATGTCGCGACAAAC
JMSF037L23+ GTTGGTATAGTTGACATATCCATAGCCGAGGGAACGGCGAGAGCTCATGTCGCGACAAAC
                      ____________________________________________________________
consensus GTTGGTATAGTTGACATATCCATAGCCGAGGGAACGGCGAGAGCTCATGTCGCGACAAAC
 
. : . : . : . : . : . :
JMFS159C04+ CCTAACTGATACCACCTGGCCCACCTGGTTAAACAGA
JMFS041H01+ CCTGACAGACACAACCTGTCCGACCTGGTTGAACAGATCGTAGAGCTGCGAGTCCGACAC
JMSF030E18+ CCTGACAGACACAACCTGTCCGACCTGGTTGAACAGATCGTAGAGCTGCGAGTCCGACAC
JMSF037L23+ CCTGACAGACACAACCTGTCCGACCTGGTTGAACAGATCGTAGAGCTGCGAGTCCGACAC
                      ____________________________________________________________
consensus CCTGACAGACACAACCTGTCCGACCTGGTTGAACAGATCGTAGAGCTGCGAGTCCGACAC
 
. : . : . : . : . : . :
JMFS041H01+ GTTCGCGTCCAGGTCACCAACGTAAAGCGAAGTCGACAGGAACTGGTTGCCGACCACGCC
JMSF030E18+ GTTCGCGTCCAGGTCACCAACGTAAAGCGAAGTCGACAGGAACTGGTTGCCGACCACGCC
JMSF037L23+ GTTCGCGTCCAGGTCACCAACGTAAAGCGAAGTCGACAGGAACTGGTTGCCGACCACGCC
                      ____________________________________________________________
consensus GTTCGCGTCCAGGTCACCAACGTAAAGCGAAGTCGACAGGAACTGGTTGCCGACCACGCC
 
. : . : . : . : . : . :
JMFS041H01+ ACCGGGAGCAACAACCGCGGCAGTGGCGGCGGCGGCTGCCACGCCGCCGGCACTCGGCGC
JMSF030E18+ ACCGGGAGCAACAACCGCGGCAGTGGCGGCGGCGGCTGCCACGCCGCCGGCACTCGGCGC
JMSF037L23+ ACCGGGAGCAACAACCGCGGCAGTGGCGGCGGCGGCTGCCACGCCGCCGGCACTCGGCGC
                      ____________________________________________________________
consensus ACCGGGAGCAACAACCGCGGCAGTGGCGGCGGCGGCTGCCACGCCGCCGGCACTCGGCGC
 
. : . : . : . : . : . :
JMFS041H01+ TGCCAATCCGTTGGCTCCCATCGCCGGACTCTGATGCTGCACTTGAATCTG
JMSF030E18+ TGCCAATCCGTTGGCTCCCATCGCCGGACTNTGATGCTGCACTTGAATCTGAGCCATTCT
JMSF037L23+ TGCCAATCCGTTGGCTCCCATCGCCGGACTCTGATGCTGCACTTGAATCTGAGCCATTCT
                      ____________________________________________________________
consensus TGCCAATCCGTTGGCTCCCATCGCCGGACTCTGATGCTGCACTTGAATCTGAGCCATTCT
 
. : . : . : . : . : . :
JMSF030E18+ CCTCTCACGACCAAATAGCAATTCGCTTTCTGTTCCCTCTCCCCCTATCCGCTCAACTAT
JMSF037L23+ CCTCTCACGACCAAATAGCAATTCGCTTTCTGTTCCCTCTCCCCCTATCCGCTCAACTAT
                      ____________________________________________________________
consensus CCTCTCACGACCAAATAGCAATTCGCTTTCTGTTCCCTCTCCCCCTATCCGCTCAACTAT
 
. : . : . : . : . : . :
JMSF030E18+ AATAATTAACGATAAGCGCCGAAATTAGTTACAGAAATTGCCGGAGATTTTTAGGGGGGG
JMSF037L23+ AATAATTAACGATAAGCGCCGAAATTAGTTACAGAAATTGCCGGAGATTTTTAGGGGGGG
                      ____________________________________________________________
consensus AATAATTAACGATAAGCGCCGAAATTAGTTACAGAAATTGCCGGAGATTTTTAGGGGGGG
 
. : . : . : . : . : . :
JMSF030E18+ TTTTGTATGTAAATACGATAGGAGAGGGAGGGTAAAATAGGGATAAATCGCCGGAGATCC
JMSF037L23+ TTTTGTATGTAAATACGATAGGAGAGGGAGGGTAAAATAGGGATAAATCGCCGGAGATCC
                      ____________________________________________________________
consensus TTTTGTATGTAAATACGATAGGAGAGGGAGGGTAAAATAGGGATAAATCGCCGGAGATCC
 
. : . : . : . : . : . :
JMSF030E18+ AACGGAGAGAGACGAAACAGAAGGATTTTTAGGGAGGGCAGGGGGAAAACTGCACCGC
JMSF037L23+ AACGGAGAGAGACGAAACAGAAGGATTTTTAGGGAGGGCAGGGGGAAAACTGCACCGCAC
                      ____________________________________________________________
consensus AACGGAGAGAGACGAAACAGAAGGATTTTTAGGGAGGGCAGGGGGAAAACTGCACCGCAC